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Primary References:
1. Spriggs RV, Artymiuk PJ, Willett P. (2003) Searching for patterns of amino acids in 3D protein structures. J Chem Inf Comput Sci. Mar-Apr;43(2):412-21. (Citation for ASSAM search)
2. Artymiuk PJ, Poirrette AR, Grindley HM, Rice DW, Willett P. (1994) A graph-theoretic approach to the identification of three-dimensional patterns of amino acid side-chains in protein structures. J Mol Biol. Oct 21;243(2):327-44.