NASSAM & COGNAC Annotated Interactions
(Number of structures in the dataset: 3105)blob
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Base-Pair (COGNAC)
Base-Triple (COGNAC)
Base-Quadruple Pattern 1
Base-Quadruple Pattern 2
Base-Quintuple Pattern 1
Base-Quintuple Pattern 2
Base-Quintuple Pattern 3
Base-Sextuple Pattern 1
Base-Sextuple Pattern 2
Base-Sextuple Pattern 3
Base-Sextuple Pattern 4
Base-Sextuple Pattern 5
Base-Sextuple Pattern 6
ACG
AGC
AUA
AAU
ACG
AGC
AUA
AAU
GUA
GCG
Base-Triple (NASSAM)
Stacked UAU Base Triples
GNRA
UNCG
CUUG
All Tetraloop
Canonical
Cis
Naked
Pseudo cis
Reverse single
Single
All Ribose-zipper
Tandem Cis/Single Ribose-zipper
T-loop
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PubMed ID
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