PDBID Molecule/
Organism
Pfam Residues HETATM Symmetry Pubmed View
1dev MAD (MOTHERS AGAINST DECAPENTAPLEGIC, DROSOPHILA) HOMOLOG 2
SMAD ANCHOR FOR RECEPTOR ACTIVATION
Homo sapiens
MH2
SARA
VAL A 266
VAL A 452
VAL B 705
None
heteromer
asymmetric
10615055
1egp EGLIN-C
Hirudo medicinalis
-VAL A  13
VAL A  14
VAL B  63
None
heteromer
asymmetric
8425603
1g2c FUSION PROTEIN (F)
Human orthopneumovirus
Fusion_glyVAL A 185
VAL C 185
VAL E 185
None
heteromer
cyclic
11106388
1jb1 HPRK PROTEIN
Lactobacillus casei
Hpr_kinase_CVAL A 269
VAL B 269
VAL C 269
None
homomer
dihedral
11483495
1jek ENV POLYPROTEIN
Visna-maedi virus
-VAL A 580
VAL C 580
VAL E 580
None
heteromer
cyclic
11447278
1nxu HYPOTHETICAL OXIDOREDUCTASE YIAK
Escherichia coli
Ldh_2VAL A 161
VAL A 171
VAL B 232
None
homomer
cyclic
14718529
1p9h INVASIN
Yersinia enterocolitica
YadA_head
YadA_stalk
VAL A 209
VAL B 209
VAL C 209
None
homomer
cyclic
14765110
1stm SATELLITE PANICUM MOSAIC VIRUS
Panicum papanivirus 1
Potex_coatVAL J 106
VAL 0 106
VAL 3 106
None
homomer
icosahedral
7552713
1svf PROTEIN (FUSION GLYCOPROTEIN)
Mammalian rubulavirus 5
Fusion_glyVAL A 151
VAL C 151
VAL E 151
None
heteromer
cyclic
10198633
1wyy E2 GLYCOPROTEIN
Severe acute respiratory syndrome-related coronavirus
Corona_S2VAL A 934
VAL B 934
VAL C 934
None
homomer
cyclic
15840526
2aly PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN
Thermus thermophilus
B3_4
B5
FDX-ACB
tRNA-synt_2d
tRNA-synt_2d
tRNA_bind
VAL A  86
VAL A  88
VAL D 638
None
heteromer
cyclic
16338408
2e6x HYPOTHETICAL PROTEIN TTHA1281
Thermus thermophilus
DUF3248VAL A  57
VAL A  62
VAL B  64
None
homomer
cyclic
-
2qih PROTEIN USPA1
Moraxella catarrhalis
DUF1079VAL A 591
VAL B 591
VAL C 591
 CL A1013
homomer
cyclic
18497748
2qqy SIGMA B OPERON
Bacillus anthracis
FerritinVAL A  40
VAL H  40
VAL K  40
None
homomer
tetrahedral
-
2yvv HYALURONIDASE, PHAGE ASSOCIATED
Streptococcus pyogenes
Hyaluronidase_1VAL A 323
VAL B 323
VAL C 323
None
homomer
cyclic
-
3bf4 ETHYL TERT-BUTYL ETHER DEGRADATION ETHD PROTEIN
Cupriavidus pinatubonensis
EthDVAL A  42
VAL B 102
VAL B 103
None
homomer
cyclic
-
3h7x ADHESIN YADA
Yersinia enterocolitica
-VAL A 316
VAL B 316
VAL C 316
None
homomer
cyclic
20178846
3hn6 GLUCOSAMINE-6-PHOSPHATE DEAMINASE
Borreliella burgdorferi
Glucosamine_isoVAL A 220
VAL C 220
VAL E 220
None
homomer
dihedral
-
3hro TRANSIENT RECEPTOR POTENTIAL (TRP) CHANNEL SUBFAMILY P MEMBER 2 (TRPP2), ALSO CALLED POLYCYSTIN-2 OR POLYCYSTIC KIDNEY DISEASE 2(PKD2)
Homo sapiens
Fer4_24VAL A 834
VAL B 834
VAL C 834
None
homomer
cyclic
19556541
3kpe FUSION GLYCOPROTEIN F0
Human orthopneumovirus
Fusion_glyVAL A 178
VAL C 178
VAL E 178
None
heteromer
cyclic
19966279
3l4f RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 7
Rattus norvegicus
betaPIX_CCVAL A 629
VAL B 629
VAL C 629
None
heteromer
asymmetric
20117114
3m0a TNF RECEPTOR-ASSOCIATED FACTOR 2
Homo sapiens
TRAF_BIRC3_bdVAL A 293
VAL B 293
VAL C 293
None
heteromer
asymmetric
20385093
3mc4 WW/RSP5/WWP DOMAIN:BACTERIAL TRANSFERASE HEXAPEPTIDE REPEAT:SERINE O-ACETYLTRANSFERASE
Brucella abortus
Hexapep
SATase_N
VAL A 241
VAL B 241
VAL C 241
None
homomer
cyclic
-
3mqg LIPOPOLYSACCHARIDES BIOSYNTHESIS ACETYLTRANSFERASE
Bordetella petrii
HexapepVAL A 146
VAL B 146
VAL C 146
None
homomer
cyclic
20433200
3pp5 BRK1
Dictyostelium discoideum
-VAL A  56
VAL B  56
VAL C  56
None
homomer
cyclic
21701600
3pr7 USPA1
Moraxella catarrhalis
YadA_head
YadA_stalk
VAL A 332
VAL B 332
VAL C 332
None
homomer
cyclic
21876142
3s6x OUTER CAPSID PROTEIN SIGMA-1
Mammalian orthoreovirus
Reo_sigma1VAL A 254
VAL B 254
VAL C 254
None
homomer
asymmetric
21829363
3twd BIFUNCTIONAL PROTEIN GLMU
Escherichia coli
HexapepVAL A 441
VAL B 441
VAL C 441
None
homomer
cyclic
21984832
3u6x BPP
Lactococcus phage TP901-1
Caudo_bapla_RBPVAL A  36
VAL B  36
VAL C  36
None
heteromer
cyclic
22611190
3wmi EIAV GP45 WILD TYPE
Equus caballus
-VAL A 516
VAL C 516
VAL E 516
None
heteromer
cyclic
-
3wmq GALACTOSE-BINDING LECTIN
Sinularia lochmodes
H_lectinVAL A   5
VAL B   5
VAL C   5
None
homomer
dihedral
26022515
3ze3 DIACYLGLYCEROL KINASE
Escherichia coli
-VAL D  78
VAL D  79
VAL F  78
None
homomer
cyclic
23676677
4d8m PESTICIDAL CRYSTAL PROTEIN CRY5BA
Bacillus thuringiensis
Endotoxin_C
Endotoxin_N
VAL A 124
VAL B 124
VAL C 124
None
homomer
cyclic
23150986
4fla REGULATION OF NUCLEAR PRE-MRNA DOMAIN-CONTAINING PROTEIN 1B
Homo sapiens
CREPTVAL A 208
VAL A 230
VAL B 286
None
homomer
cyclic
24997600
4fm4 NITRILE HYDRATASE ALPHA SUBUNIT
NITRILE HYDRATASE BETA SUBUNIT
Comamonas testosteroni
NHase_alpha
NHase_beta
VAL A 127
VAL A 149
VAL B 193
None
heteromer
asymmetric
22713452
4jf3 ENVELOPE GLYCOPROTEIN
Mason-Pfizer monkey virus
TLV_coatVAL A 457
VAL B 457
VAL C 457
 CL A 601
homomer
cyclic
24131724
4lgo VOMPD
Bartonella quintana
YadA_stalkVAL A 327
VAL B 327
VAL C 327
None
homomer
cyclic
-
4mi2 PUTATIVE ENOYL-COA HYDRATASE/ISOMERASE
Mycobacteroides abscessus
ECH_1VAL A 226
VAL B 226
VAL C 226
None
homomer
cyclic
-
4mod HR1 OF S PROTEIN, LINKER, HR2 OF S PROTEIN
synthetic construct,Middle East respiratory syndrome-related coronavirus
Corona_S2VAL A1026
VAL B1026
VAL C1026
None
homomer
cyclic
24067982
4nkj HEMAGGLUTININ HA2
Influenza B virus
HemagglutininVAL A  54
VAL B  54
VAL C  54
None
homomer
cyclic
24433110
4ob0 COBALT-CONTAINING NITRILE HYDRATASE SUBUNIT ALPHA
COBALT-CONTAINING NITRILE HYDRATASE SUBUNIT BETA
Pseudonocardia thermophila
NHase_alpha
NHase_beta
VAL A 136
VAL A 159
VAL B 214
None
heteromer
asymmetric
24383915
4obu PYRIDOXAL-DEPENDENT DECARBOXYLASE DOMAIN PROTEIN
[Ruminococcus] gnavus
Pyridoxal_deCVAL E  72
VAL E  75
VAL H 370
None
homomer
cyclic
25263219
4r1q L-ARABINOSE ISOMERASE
Geobacillus kaustophilus
Arabinose_Iso_C
Arabinose_Isome
VAL A 492
VAL D 492
VAL E 492
None
homomer
dihedral
-
4ypc VIMENTIN
Homo sapiens
FilamentVAL A 171
VAL B 171
VAL C 171
None
homomer
cyclic
26795465
4ypo KETOL-ACID REDUCTOISOMERASE
Mycobacterium tuberculosis
IlvC
IlvN
VAL A 195
VAL B 204
VAL B 225
None
homomer
cyclic
26876563
5abs SH3 DOMAIN-CONTAINING KINASE-BINDING PROTEIN 1
Homo sapiens
-VAL A 655
VAL B 655
VAL C 655
None
homomer
cyclic
27353366
5e7t MAJOR STRUCTURAL PROTEIN 1
Lactococcus phage Tuc2009
-VAL E  30
VAL J  30
VAL F  30
None
heteromer
cyclic
26814179
5ha6 SYNCYTIN-1
Homo sapiens
TLV_coatVAL A 379
VAL B 379
VAL C 379
 CL A 501
 CL B 501
homomer
cyclic
-
5hjf FERRITIN, DPS FAMILY PROTEIN
Nostoc punctiforme
FerritinVAL A 179
VAL D 179
VAL J 179
None
homomer
tetrahedral
-
5idr DSBA-LIKE PROTEIN
Proteus mirabilis
Thioredoxin_4VAL A  13
VAL B  13
VAL C  13
None
homomer
asymmetric
28722010
5izs DESIGNED PROTEIN 5L6HC3_1
synthetic construct
-VAL A  25
VAL B  25
VAL C  25
None
homomer
cyclic
27151862
5lal DIRIGENT PROTEIN 6
Arabidopsis thaliana
DirigentVAL A 149
VAL B 149
VAL C 149
None
homomer
cyclic
27756822
5nxf LONG-TAIL FIBER PROXIMAL SUBUNIT
Escherichia virus T4
-VAL A 863
VAL B 863
VAL C 863
None
homomer
asymmetric
28665339
5ua0 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE 2, CHLOROPLASTIC
Arabidopsis thaliana
DapB_C
DapB_N
VAL A 221
VAL A 224
VAL B 229
None
homomer
cyclic
29187521
5uju NAD-DEPENDENT ALDEHYDE DEHYDROGENASE
Burkholderia multivorans
AldedhVAL A 195
VAL A 549
VAL B 498
None
homomer
cyclic
-
5ycq HEAT SHOCK PROTEIN HSPQ
Escherichia coli
YccV-likeVAL A  64
VAL B  64
VAL C  64
None
homomer
cyclic
29083032
5z1g RIBOSOME BIOGENESIS PROTEIN BRX1
RRNA-PROCESSING PROTEIN EBP2
Saccharomyces cerevisiae
Brix
Ebp2
VAL A 254
VAL D 136
VAL D 176
None
heteromer
asymmetric
29557065
6fue FAPF
Pseudomonas sp. UK4
-VAL A  32
VAL B  32
VAL C  32
None
homomer
cyclic
29886016