PDBID Molecule/
Organism
Pfam Residues HETATM Symmetry Pubmed View
1cl1 CYSTATHIONINE BETA-LYASE
Escherichia coli
Cys_Met_Meta_PPSER A  32
SER A  33
SER C 216
None
homomer
dihedral
8831789
1dcu FRUCTOSE-1,6-BISPHOSPHATASE
Pisum sativum
FBPaseSER A  23
SER D  43
SER D  44
None
homomer
dihedral
10581254
1dg6 APO2L/TNF-RELATED APOPOTIS INDUCING LIGAND (TRAIL)
Homo sapiens
TNFSER A 232
SER B 232
SER C 232
None
homomer
cyclic
10651627
1duv ORNITHINE TRANSCARBAMOYLASE
Escherichia coli
OTCace
OTCace_N
SER G  79
SER H  79
SER I  79
None
homomer
cyclic
10747936
1dyn DYNAMIN
Homo sapiens
PHSER A 107
SER B 107
SER B 111
None
homomer
dihedral
7954789
1eer ERYTHROPOIETIN
ERYTHROPOIETIN RECEPTOR
Homo sapiens
EPO_TPO
fn3
EpoR_lig-bind
SER A 100
SER A 104
SER C  91
None
heteromer
asymmetric
9774108
1ega PROTEIN (GTP-BINDING PROTEIN ERA)
Escherichia coli
KH_2
MMR_HSR1
SER A   6
SER B  84
SER B  85
None
homomer
cyclic
10411886
1el6 BASEPLATE STRUCTURAL PROTEIN GP11
Escherichia virus T4
GP11SER A  63
SER B  63
SER C  63
None
homomer
cyclic
10966799
1eno ENOYL ACYL CARRIER PROTEIN REDUCTASE
Brassica napus
adh_short_C2SER A 203
SER A 204
SER B 211
None
homomer
dihedral
8535786
1fp1 ISOLIQUIRITIGENIN 2'-O-METHYLTRANSFERASE
Medicago sativa
Dimerisation
Methyltransf_2
SER D 319
SER D 323
SER A  94
None
homomer
cyclic
11224575
1gr3 COLLAGEN X
Homo sapiens
C1qSER A 639
SER C 671
SER C 673
None
homomer
cyclic
11839302
1h9m MOLYBDENUM-BINDING-PROTEIN
Azotobacter vinelandii
TOBESER A 134
SER B 134
SER C 134
None
homomer
cyclic
11352591
1hy0 DELTA CRYSTALLIN I
Anas platyrhynchos
ASL_C2
Lyase_1
SER A 175
SER C 234
SER C 319
None
homomer
dihedral
11258884
1i58 CHEMOTAXIS PROTEIN CHEA
Thermotoga maritima
HATPase_cSER A 478
SER B 520
SER B 522
None
homomer
cyclic
11276258
1iqp RFCS
Pyrococcus furiosus
AAA
Rep_fac_C
SER A 232
SER B 150
SER B 151
None
homomer
cyclic
11545747
1jek ENV POLYPROTEIN
Visna-maedi virus
-SER A 562
SER C 562
SER E 562
None
heteromer
cyclic
11447278
1jmu PROTEIN MU-1
Reovirus sp.
Reovirus_M2SER B 303
SER D 653
SER D 656
None
heteromer
cyclic
11832217
1k66 PHYTOCHROME RESPONSE REGULATOR RCPB
Tolypothrix sp. PCC 7601
Response_regSER A 116
SER A 117
SER B 116
None
homomer
cyclic
15240481
1kht ADENYLATE KINASE
Methanococcus voltae
AAA_17SER A 161
SER B 161
SER C 161
None
homomer
cyclic
12860130
1m32 2-AMINOETHYLPHOSPHONATE-PYRUVATE AMINOTRANSFERASE
Salmonella enterica
Aminotran_5SER A  64
SER A  66
SER B 222
PLP A4401
homomer
cyclic
12403617
1n3l TYROSYL-TRNA SYNTHETASE
Homo sapiens
tRNA-synt_1bSER A 137
SER A 138
SER B 162
None
homomer
cyclic
12427973
1np0 BETA-HEXOSAMINIDASE SUBUNIT BETA
BETA-HEXOSAMINIDASE SUBUNIT BETA CHAIN B
Homo sapiens
Glyco_hydro_20
Glycohydro_20b2
SER A  82
SER A  85
SER C 130
None
heteromer
cyclic
12662933
1o91 COLLAGEN ALPHA 1(VIII) CHAIN
Mus musculus
C1qSER A 702
SER C 734
SER C 736
SO4 C 900
homomer
cyclic
12782141
1o94 ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT
ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT
Methylophilus methylotrophus
ETFSER C 133
SER D 104
SER D 108
None
heteromer
cyclic
12567183
1p0k ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE
Bacillus subtilis
FMN_dhSER A  34
SER E 191
SER E 194
None
homomer
dihedral
12798687
1psc PHOSPHOTRIESTERASE
Brevundimonas diminuta
PTESER A 137
SER B 307
SER B 308
None
homomer
cyclic
7794910
1qhd VIRAL CAPSID VP6
Rotavirus A
Rota_Capsid_VP6SER A 339
SER B 339
SER C 339
None
homomer
cyclic
11285213
1qu7 METHYL-ACCEPTING CHEMOTAXIS PROTEIN I
Escherichia coli
MCPsignalSER A 358
SER A 424
SER B 358
None
homomer
asymmetric
10466731
1qv9 F420-DEPENDENT METHYLENETETRAHYDROMETHANOPTERIN DEHYDROGENASE
Methanopyrus kandleri
MTDSER A 257
SER B 257
SER C 257
None
homomer
dihedral
14499608
1qzu HYPOTHETICAL PROTEIN MDS018
Homo sapiens
FlavoproteinSER A 113
SER B 113
SER C 113
None
homomer
cyclic
14501115
1rgx RESISTIN
Mus musculus
ResistinSER A  55
SER B  55
SER C  55
None
homomer
cyclic
15155948
1sby ALCOHOL DEHYDROGENASE
Scaptodrosophila lebanonensis
adh_shortSER A 152
SER B 160
SER B 164
None
homomer
cyclic
-
1t6m 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE
Bacillus thuringiensis
PI-PLC-XSER A 285
SER B 131
SER B 133
None
homomer
asymmetric
16042375
1ted PKS18
Mycobacterium tuberculosis
Chal_sti_synt_C
Chal_sti_synt_N
SER A 166
SER B 252
SER B 254
None
homomer
cyclic
15286723
1tj7 ARGININOSUCCINATE LYASE
Escherichia coli
ASL_C2
Lyase_1
SER A 108
SER B 277
SER B 278
PO4 A 601
PO4 B 602
homomer
cyclic
15502303
1v3w FERRIPYOCHELIN BINDING PROTEIN
Pyrococcus horikoshii
HexapepSER A 100
SER B 100
SER C 100
EDO A2003
EDO B2003
EDO C2003
homomer
cyclic
18931408
1vdk FUMARATE HYDRATASE CLASS II
Thermus thermophilus
FumaraseC_C
Lyase_1
SER A 139
SER A 140
SER C 318
None
homomer
dihedral
-
1vhv DIPHTHINE SYNTHASE
Archaeoglobus fulgidus
TP_methylaseSER A 114
SER B 112
SER B 114
None
homomer
cyclic
16021622
1x7o RRNA METHYLTRANSFERASE
Streptomyces viridochromogenes
SpoU_methylaseSER A 176
SER A 179
SER B 259
None
homomer
cyclic
15581897
1ya5 N2B-TITIN ISOFORM
TELETHONIN
Homo sapiens
TelethoninSER B  14
SER T  38
SER T  57
None
heteromer
asymmetric
16407954
1ya7 PROTEASOME ACTIVATOR PROTEIN PA26
Trypanosoma brucei
PA28_betaSER O 153
SER P 176
SER P 178
None
heteromer
dihedral
15916965
1yox HYPOTHETICAL PROTEIN PA3696
Pseudomonas aeruginosa
AIM24SER A  14
SER B  14
SER C  14
None
homomer
cyclic
-
1yq5 MINOR CAPSID PROTEIN
Pseudomonas virus PRD1
DUF1860SER A 300
SER B 300
SER C 300
None
homomer
cyclic
15837420
1yq8 MINOR CAPSID PROTEIN
Pseudomonas virus PRD1
DUF1860SER A 154
SER B 154
SER C 154
None
homomer
cyclic
15837420
2a33 HYPOTHETICAL PROTEIN
Arabidopsis thaliana
Lysine_decarboxSER A 153
SER B 153
SER B 156
None
homomer
cyclic
17048257
2a6q ANTITOXIN YEFM
TOXIN YOEB
Escherichia coli
PhdYeFM_antitox
YoeB_toxin
SER A  76
SER E   6
SER E   9
None
heteromer
asymmetric
16109374
2a9g ARGININE DEIMINASE
Pseudomonas aeruginosa
AmidinotransfSER A 395
SER B 393
SER B 395
None
homomer
dihedral
16091358
2ast CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1
S-PHASE KINASE-ASSOCIATED PROTEIN 2
Homo sapiens
CKS
F-box-like
SER B2238
SER B2264
SER C3039
None
heteromer
asymmetric
16209941
2atp T-CELL SURFACE GLYCOPROTEIN CD8 ALPHA CHAIN
T-CELL SURFACE GLYCOPROTEIN CD8 BETA CHAIN
Mus musculus
V-setSER A 108
SER B  30
SER B  52
None
heteromer
asymmetric
16356863
2bwn 5-AMINOLEVULINATE SYNTHASE
Rhodobacter capsulatus
Aminotran_1_2SER A 113
SER A 277
SER B 114
PLP B1248
homomer
cyclic
16121195
2cb2 SULFUR OXYGENASE REDUCTASE
Acidianus ambivalens
SORSER A  70
SER B  69
SER B  70
None
homomer
octahedral
16484493
2ccv HELIX POMATIA AGGLUTININ
Helix pomatia
H_lectinSER A  50
SER B  50
SER C  50
None
homomer
dihedral
16704980
2cvz 3-HYDROXYISOBUTYRATE DEHYDROGENASE
Thermus thermophilus
NAD_binding_11
NAD_binding_2
SER C 117
SER D 203
SER D 204
None
homomer
dihedral
16126223
2dc1 L-ASPARTATE DEHYDROGENASE
Archaeoglobus fulgidus
DUF108
NAD_binding_3
SER A 109
SER A 222
SER B1120
None
homomer
cyclic
17651440
2dsk CHITINASE
Pyrococcus furiosus
-SER A 452
SER A 453
SER B 427
None
homomer
cyclic
17183162
2dt4 HYPOTHETICAL PROTEIN PH0802
Pyrococcus horikoshii
DUF296SER A  74
SER B  74
SER C  74
None
homomer
cyclic
17295322
2dv6 NITRITE REDUCTASE
Hyphomicrobium denitrificans
Cu-oxidase_3SER D 392
SER E 392
SER F 392
None
homomer
dihedral
17360521
2f1f ACETOLACTATE SYNTHASE ISOZYME III SMALL SUBUNIT
Escherichia coli
ACT_5
ALS_ss_C
SER A  24
SER B  13
SER B  17
None
homomer
cyclic
16458324
2f9i ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHA
ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA
Staphylococcus aureus
ACCA
Carboxyl_trans
SER A 171
SER B 210
SER B 215
None
heteromer
cyclic
16460018
2fa5 TRANSCRIPTIONAL REGULATOR MARR/EMRR FAMILY
Xanthomonas campestris
MarR_2SER A  27
SER B  30
SER B  34
None
homomer
cyclic
16862595
2fyz FUSION GLYCOPROTEIN F0
Mumps rubulavirus
Fusion_glySER A 126
SER C 126
SER E 126
None
heteromer
cyclic
16904649
2g9t ORF1A POLYPROTEIN
Severe acute respiratory syndrome-related coronavirus
NSP10SER A  15
SER C  15
SER F  15
None
homomer
tetrahedral
16873247
2gk3 PUTATIVE CYTOPLASMIC PROTEIN
Salmonella enterica
GATase1_likeSER A  24
SER A  29
SER C  33
None
homomer
dihedral
17968677
2hx0 PUTATIVE DNA-BINDING PROTEIN
Salmonella enterica
DUF296SER A  73
SER B  73
SER C  73
None
homomer
cyclic
-
2hzm RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 18
RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 20
Saccharomyces cerevisiae
Med18
Med20
SER A  96
SER B  36
SER B  67
None
heteromer
asymmetric
16964259
2i9d CHLORAMPHENICOL ACETYLTRANSFERASE
Bacteroides thetaiotaomicron
CATSER A 156
SER B 156
SER C 156
None
homomer
cyclic
-
2ig8 HYPOTHETICAL PROTEIN PA3499
Pseudomonas aeruginosa
Ribonuc_L-PSPSER A 117
SER B 117
SER C 117
None
homomer
cyclic
-
2inu INSULIN FRUCTOTRANSFERASE
Bacillus sp. snu-7
Beta_helix_2SER A 309
SER B 309
SER C 309
None
homomer
cyclic
17192265
2j0w LYSINE-SENSITIVE ASPARTOKINASE 3
Escherichia coli
AA_kinase
ACT
SER A 345
SER A 348
SER B 423
None
homomer
cyclic
16905770
2j1d DISHEVELED-ASSOCIATED ACTIVATOR OF MORPHOGENESIS 1
Homo sapiens
FH2SER G 838
SER G 839
SER A 616
None
homomer
cyclic
17482208
2nps SYNTAXIN 13
VESICLE-ASSOCIATED MEMBRANE PROTEIN 4
Mus musculus
Rattus norvegicus
SNARE
Synaptobrevin
SER A  93
SER B 225
SER B 226
None
heteromer
asymmetric
17159904
2nx9 OXALOACETATE DECARBOXYLASE 2, SUBUNIT ALPHA
Vibrio cholerae
HMGL-like
PYC_OADA
SER A 291
SER B 235
SER B 238
None
homomer
cyclic
17270211
2ouw ALKYLHYDROPEROXIDASE AHPD CORE
Rhodospirillum rubrum
CMDSER A  82
SER C  82
SER E  82
None
homomer
dihedral
-
2p5m ARGININE REPRESSOR
Bacillus subtilis
Arg_repressor_CSER A  91
SER B  91
SER C  91
None
homomer
dihedral
18007040
2pfm ADENYLOSUCCINATE LYASE
Bacillus anthracis
ADSL_C
Lyase_1
SER A  96
SER C 264
SER C 265
MLI A 902
homomer
dihedral
-
2pm7 PROTEIN TRANSPORT PROTEIN SEC31
Saccharomyces cerevisiae
Sec16_CSER A 505
SER A 507
SER C 568
None
heteromer
cyclic
17604721
2pnv SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL PROTEIN 2
Rattus norvegicus
-SER A 501
SER B 501
SER C 501
None
homomer
cyclic
17910055
2pt7 CAG-ALFA
Helicobacter pylori
T2SSESER A   7
SER B  77
SER B  79
None
heteromer
cyclic
17972918
2qf7 PYRUVATE CARBOXYLASE PROTEIN
Rhizobium etli
Biotin_carb_C
Biotin_carb_N
Biotin_lipoyl
CPSase_L_D2
HMGL-like
PYC_OADA
SER A 854
SER C1096
SER C1114
None
homomer
cyclic
17717183
2qxx DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE
Mycobacterium tuberculosis
dUTPaseSER A 103
SER B 180
SER B 182
TTP B 201
homomer
cyclic
18164314
2vji TAILSPIKE PROTEIN
Salmonella virus HK620
Phage_spike_2SER A 543
SER B 543
SER C 543
None
homomer
cyclic
18547389
2vpv PROTEIN MIF2
Saccharomyces cerevisiae
CENP-C_CSER A 530
SER C 530
SER E 530
None
homomer
dihedral
18701705
2vro ALDEHYDE DEHYDROGENASE
Paraburkholderia xenovorans
AldedhSER A 134
SER A 138
SER B 472
None
homomer
cyclic
18462753
2wii COMPLEMENT C3 BETA CHAIN
COMPLEMENT C3B ALPHA' CHAIN
Homo sapiens
A2M
A2M_N
Thiol-ester_cl
A2M_N_2
A2M_comp
A2M_recep
NTR
SER A 312
SER A 314
SER B 873
None
heteromer
asymmetric
19503104
2wlg POLYSIALIC ACID O-ACETYLTRANSFERASE
Neisseria meningitidis
HexapepSER A 184
SER B 184
SER C 184
EDO A1220
EDO C1221
homomer
cyclic
19525232
2wn3 DISCOIDIN-1 SUBUNIT A
Dictyostelium discoideum
F5_F8_type_C
H_lectin
SER A 157
SER B 157
SER C 157
SO4 A 401
homomer
cyclic
20580724
2wzp PUTATIVE RECEPTOR BINDING PROTEIN
Lactococcus virus P2
Caudo_bapla_RBPSER A 230
SER B 230
SER C 230
None
heteromer
cyclic
20351260
2x3h K5 LYASE
Escherichia virus K1-5
-SER A 267
SER B 267
SER C 267
None
homomer
cyclic
20519506
2xot AMPHOTERIN-INDUCED PROTEIN 1
Mus musculus
I-set
LRR_8
SER A 166
SER A 193
SER B  42
None
homomer
cyclic
21983541
2xts CYTOCHROME
SULFITE DEHYDROGENASE
Paracoccus pantotrophus
Cytochrome_CBB3
Mo-co_dimer
Oxidored_molyb
SER A 217
SER A 218
SER B 120
MTE A 500
heteromer
cyclic
21147779
2xzz PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE K
Homo sapiens
Transglut_CSER A 776
SER M 776
SER S 776
None
homomer
octahedral
-
2yad SURFACTANT PROTEIN C BRICHOS DOMAIN
Homo sapiens
BRICHOS
SP_C-Propep
SER A  95
SER B  95
SER E  95
None
homomer
cyclic
22308375
2yvv HYALURONIDASE, PHAGE ASSOCIATED
Streptococcus pyogenes
Hyaluronidase_1SER A  56
SER B  56
SER C  56
None
homomer
cyclic
-
2yz2 PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN TM_0222
Thermotoga maritima
ABC_tranSER A 130
SER F   9
SER F  61
None
homomer
dihedral
-
2z5w BCLA PROTEIN
Bacillus anthracis
BclA_CSER A 169
SER B 169
SER C 169
GOL B   1
homomer
cyclic
17879302
2zog CYTOSOLIC NON-SPECIFIC DIPEPTIDASE
Mus musculus
Peptidase_M20SER A 229
SER B 315
SER B 341
None
homomer
cyclic
18550540
3b4w ALDEHYDE DEHYDROGENASE
Mycobacterium tuberculosis
AldedhSER A 140
SER A 477
SER B 450
None
homomer
cyclic
-
3bam PROTEIN (RESTRICTION ENDONUCLEASE BAMHI)
Bacillus amyloliquefaciens
BamHISER A 118
SER A 119
SER B 118
None
homomer
cyclic
9783752
3bru REGULATORY PROTEIN, TETR FAMILY
Rhodobacter sphaeroides
TetR_C_13
TetR_N
SER A  46
SER B  46
SER B  47
None
homomer
cyclic
-
3c1m PROBABLE ASPARTOKINASE
Methanocaldococcus jannaschii
AA_kinase
ACT
ACT_7
SER A 353
SER A 362
SER B 442
None
homomer
dihedral
18334478
3ci9 HEAT SHOCK FACTOR-BINDING PROTEIN 1
Homo sapiens
HSBP1SER A  31
SER C  31
SER E  31
None
homomer
dihedral
18767159
3cla TYPE III CHLORAMPHENICOL ACETYLTRANSFERASE
Escherichia coli
CATSER A  34
SER A 190
SER C 157
None
homomer
cyclic
2187098
3dc7 PUTATIVE UNCHARACTERIZED PROTEIN LP_3323
Lactobacillus plantarum
Lipase_GDSL_2SER A 222
SER B 222
SER C 222
None
homomer
cyclic
-
3duz MAJOR ENVELOPE GLYCOPROTEIN
Autographa californica multiple nucleopolyhedrovirus
Baculo_gp64SER A  81
SER B  81
SER C  81
None
homomer
cyclic
18776902
3e0j DNA POLYMERASE SUBUNIT DELTA-2
DNA POLYMERASE SUBUNIT DELTA-3
Homo sapiens
CDC27SER G 289
SER H 130
SER H 133
None
heteromer
asymmetric
18818516
3emo HIA (ADHESIN)
Haemophilus influenzae
YadA_anchor
YadA_stalk
SER C 994
SER B 984
SER B 987
None
homomer
cyclic
18948113
3eya PYRUVATE DEHYDROGENASE [CYTOCHROME]
Escherichia coli
TPP_enzyme_C
TPP_enzyme_M
TPP_enzyme_N
SER A 104
SER A 105
SER C 133
None
homomer
dihedral
18988747
3fuy PUTATIVE INTEGRON GENE CASSETTE PROTEIN
uncultured bacterium
-SER A   7
SER B   7
SER C   7
None
homomer
cyclic
23349695
3g13 PUTATIVE CONJUGATIVE TRANSPOSON RECOMBINASE
Clostridioides difficile
ResolvaseSER A 131
SER B  83
SER B  85
None
homomer
cyclic
-
3gos 2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-SUCCINYLTRANSFERASE
Yersinia pestis
Hexapep
Hexapep_2
THDPS_N_2
SER A 246
SER B 246
SER C 246
None
homomer
cyclic
-
3gvd SERINE ACETYLTRANSFERASE
Yersinia pestis
Hexapep
SATase_N
SER A 179
SER B 179
SER C 179
SO4 A 274
homomer
dihedral
-
3gzh ADENYLOSUCCINATE LYASE
Escherichia coli
ASL_C
Lyase_1
SER A 123
SER D 295
SER D 296
PO4 A 504
homomer
dihedral
19724117
3h4s KCBP INTERACTING CA2+-BINDING PROTEIN
KINESIN-LIKE CALMODULIN-BINDING PROTEIN
Arabidopsis thaliana
EF-hand_8
Kinesin
SER A1154
SER A1155
SER E  47
None
heteromer
asymmetric
19416847
3h7x ADHESIN YADA
Yersinia enterocolitica
-SER A 319
SER B 319
SER C 319
None
homomer
cyclic
20178846
3hh0 TRANSCRIPTIONAL REGULATOR, MERR FAMILY
Bacillus cereus
-SER B  10
SER C   6
SER C  10
None
homomer
dihedral
-
3hm4 CHEMOTAXIS PROTEIN CHEX
Desulfovibrio alaskensis
CheXSER A  58
SER A  60
SER B 119
UNL A 156
homomer
cyclic
-
3keb PROBABLE THIOL PEROXIDASE
Chromobacterium violaceum
-SER A  56
SER B  90
SER B  92
None
homomer
cyclic
-
3l0x PROLIFERATING CELL NUCLEAR ANTIGEN
Saccharomyces cerevisiae
PCNA_C
PCNA_C
PCNA_N
SER A 141
SER A 145
SER B 219
None
heteromer
asymmetric
20305653
3lge FRUCTOSE-BISPHOSPHATE ALDOLASE A
SORTING NEXIN-9
Homo sapiens
Oryctolagus cuniculus
-SER B 275
SER F 174
SER F 176
None
homomer
cyclic
20129922
3lyb PUTATIVE ENDORIBONUCLEASE
Klebsiella pneumoniae
Ribonuc_L-PSPSER A 131
SER D 131
SER F 131
None
homomer
tetrahedral
-
3lyc PUTATIVE PECTINASE
Parabacteroides distasonis
DUF2807SER A 121
SER A 142
SER B 240
None
homomer
cyclic
-
3m1r FORMIMIDOYLGLUTAMASE
Bacillus subtilis
ArginaseSER A 249
SER B 249
SER C 249
CAC C 320
homomer
dihedral
-
3mxq SENSOR PROTEIN
Vibrio cholerae
PAS_4SER A  74
SER A  75
SER B   2
None
homomer
dihedral
-
3ne5 CATION EFFLUX SYSTEM PROTEIN CUSA
CATION EFFLUX SYSTEM PROTEIN CUSB
Escherichia coli
ACR_tran
HlyD_D23
SER A 220
SER A 221
SER F 387
None
heteromer
cyclic
21350490
3o0g CELL DIVISION PROTEIN KINASE 5
CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1
Homo sapiens
CDK5_activator
Pkinase
SER A  46
SER A  47
SER D 242
None
heteromer
asymmetric
16039528
3odh OKRAI ENDONUCLEASE
Oceanobacter kriegii
BamHISER A 106
SER B 106
SER B 107
None
homomer
cyclic
20833632
3opb SWI5-DEPENDENT HO EXPRESSION PROTEIN 4
Saccharomyces cerevisiae
UNC45-centralSER A 110
SER A 111
SER B 110
None
homomer
cyclic
21115842
3or1 SULFITE REDUCTASE ALPHA
SULFITE REDUCTASE BETA
Desulfovibrio gigas
NIR_SIR
NIR_SIR
NIR_SIR_ferr
SER A  19
SER A  22
SER B 127
None
heteromer
cyclic
-
3ozb METHYLTHIOADENOSINE PHOSPHORYLASE
Pseudomonas aeruginosa
PNP_UDP_1SER A 124
SER B 124
SER C 124
None
homomer
dihedral
21197954
3q1x SERINE ACETYLTRANSFERASE
Entamoeba histolytica
HexapepSER A 163
SER B 163
SER C 163
None
homomer
cyclic
21297164
3qki GLUCOSE-6-PHOSPHATE ISOMERASE
Plasmodium falciparum
PGISER A  36
SER A  51
SER B 568
None
homomer
cyclic
-
3rwn GENE 9 PROTEIN
Shigella virus Sf6
Phage_tail_NKSER A 231
SER B 231
SER C 231
PO4 A 283
homomer
cyclic
21705802
3s6x OUTER CAPSID PROTEIN SIGMA-1
Mammalian orthoreovirus
Reo_sigma1SER A 413
SER B 413
SER C 413
None
homomer
asymmetric
21829363
3soz CYTOPLASMIC PROTEIN STM1381
Salmonella enterica
GATase1_likeSER A  17
SER A  22
SER C  26
None
homomer
cyclic
-
3sqg METHYL COENZYME M REDUCTASE, ALPHA SUBUNIT
METHYL-COENZYME M REDUCTASE, GAMMA SUBUNIT
uncultured archaeon
MCR_alpha
MCR_gamma
MCR_alpha_N
SER A 444
SER A 476
SER C 245
None
heteromer
cyclic
22121022
3tk8 2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-SUCCINYLTRANSFERASE
Burkholderia pseudomallei
Hexapep
Hexapep_2
THDPS_N_2
SER A 285
SER B 285
SER C 285
None
homomer
cyclic
-
3tvi ASPARTOKINASE
Clostridium acetobutylicum
AA_kinase
ACT
SER A 337
SER B 411
SER B 412
None
homomer
cyclic
25170437
3u1k POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL
Homo sapiens
KH_1
PNPase
RNase_PH
RNase_PH_C
SER A 408
SER B 408
SER C 408
None
homomer
cyclic
22210891
3u4q ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B
ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A
Bacillus subtilis
PDDEXK_1
PDDEXK_1
UvrD-helicase
UvrD_C
SER A 628
SER A 644
SER B1128
None
heteromer
asymmetric
22307084
3vto PROTEIN GP45
Escherichia virus Mu
Phage_Mu_Gp45SER A 189
SER B 189
SER C 189
 CA A 302
homomer
cyclic
22922659
3wmq GALACTOSE-BINDING LECTIN
Sinularia lochmodes
H_lectinSER A  45
SER B  45
SER C  45
None
homomer
dihedral
26022515
3zds HOMOGENTISATE 1,2-DIOXYGENASE
Pseudomonas putida
HgmASER A 302
SER B 302
SER C 302
None
homomer
dihedral
23858455
4agr GALECTIN
Cinachyrella
Gal-bind_lectinSER A 143
SER C 141
SER C 143
None
homomer
dihedral
22948917
4bcu COAT PROTEIN
Tobacco virtovirus 1
TNV_CPSER 0  82
SER 0 136
SER 1 141
None
homomer
icosahedral
23318955
4beu ALANINE RACEMASE
Vibrio cholerae
Ala_racemase_C
Ala_racemase_N
SER A 122
SER B 286
SER B 287
None
homomer
cyclic
24419381
4byf CALMODULIN
UNCONVENTIONAL MYOSIN-IC
Homo sapiens
-SER C 375
SER C 378
SER D 102
None
heteromer
asymmetric
24636949
4c2m DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135
DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49
Saccharomyces cerevisiae
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
SER B 574
SER M  69
SER M  70
None
heteromer
asymmetric
24153182
4c6s PROBABLE WRKY TRANSCRIPTION FACTOR 52
Arabidopsis thaliana
-SER A  25
SER B 130
SER B 132
None
homomer
cyclic
24744375
4d3c HEPATOCYTE GROWTH FACTOR
SFN68 FAB
Homo sapiens
Oryctolagus cuniculus
C1-set
Kringle
V-set
PAN_1
SER A 161
SER H  54
SER H  55
None
heteromer
asymmetric
-
4d8m PESTICIDAL CRYSTAL PROTEIN CRY5BA
Bacillus thuringiensis
Endotoxin_C
Endotoxin_N
SER A 195
SER B 195
SER C 195
None
homomer
cyclic
23150986
4dmi CAPSID PROTEIN
unidentified
-SER A  92
SER A 131
SER C 122
None
homomer
cyclic
-
4e79 UDP-3-O-ACYLGLUCOSAMINE N-ACYLTRANSFERASE
Acinetobacter baumannii
Hexapep
Hexapep_2
LpxD
SER A 180
SER B 180
SER C 180
None
homomer
cyclic
23295477
4eqq PUTATIVE HOST CELL SURFACE-EXPOSED LIPOPROTEIN
Streptococcus phage TP-J34
Lipoprotein_LtpSER A  73
SER A  77
SER B 113
None
homomer
cyclic
23692331
4g1p CYS-GLY METALLODIPEPTIDASE DUG1
Saccharomyces cerevisiae
Peptidase_M20SER A 234
SER B 320
SER B 346
None
homomer
cyclic
-
4g2k GENERAL CONTROL PROTEIN GCN4, ENVELOPE GLYCOPROTEIN GP2 CHIMERA
Saccharomyces cerevisiae,Marburg marburgvirus
-SER A 584
SER B 584
SER C 584
 CL A 702
homomer
cyclic
22935026
4hwv PECTATE LYASE/AMB ALLERGEN
Acidovorax citrulli
Pec_lyase_CSER A 131
SER A 134
SER B 137
None
homomer
cyclic
23568384
4i0w PROTEASE CSPB
Clostridium perfringens
Peptidase_S8SER A  96
SER B 252
SER B 494
None
heteromer
asymmetric
23408892
4ic6 PROTEASE DO-LIKE 8, CHLOROPLASTIC
Arabidopsis thaliana
PDZ_2
Trypsin_2
SER A 317
SER B 317
SER C 317
None
homomer
dihedral
23633592
4iv5 ASPARTATE CARBAMOYLTRANSFERASE, PUTATIVE
Trypanosoma cruzi
OTCace
OTCace_N
SER A  62
SER A  63
SER B  89
PO4 A 401
homomer
cyclic
-
4iy7 CYSTATHIONINE GAMMA-LYASE-LIKE PROTEIN
Xanthomonas oryzae
Cys_Met_Meta_PPSER A  43
SER B 216
SER B 339
KOU B 403
homomer
dihedral
24531493
4l9b RECEPTOR BINDING PROTEIN
Lactococcus phage 1358
-SER A 258
SER A 329
SER C 330
None
homomer
cyclic
-
4l9z MALYL-COA LYASE
Rhodobacter sphaeroides
HpcH_HpaISER A 198
SER B 198
SER C 198
None
homomer
dihedral
24206647
4m6b CHIMERA PROTEIN OF HISTONE H2B.1 AND HISTONE H2A.Z
HELICASE SWR1
Saccharomyces cerevisiae
Histone
Histone_H2A_C
SER A  63
SER A  67
SER C 598
None
heteromer
asymmetric
24507717
4mjt MONALYSIN
Pseudomonas entomophila
BB_PFSER A 188
SER J  12
SER J  14
None
homomer
cyclic
25847242
4myk FORMIMINOGLUTAMASE
Trypanosoma cruzi
ArginaseSER A 235
SER B 235
SER C 235
None
homomer
cyclic
24261485
4mzy NICOTINATE PHOSPHORIBOSYLTRANSFERASE
Enterococcus faecalis
NAPRTaseSER A 265
SER B 351
SER B 352
None
homomer
cyclic
-
4n6o CYSTATIN-M
LEGUMAIN
Homo sapiens
Cystatin
Peptidase_C13
SER A 215
SER B  38
SER B  40
None
heteromer
asymmetric
25630877
4odj S-ADENOSYLMETHIONINE SYNTHASE
Cryptosporidium hominis
S-AdoMet_synt_C
S-AdoMet_synt_M
S-AdoMet_synt_N
SER A  26
SER B 327
SER B 337
None
homomer
cyclic
-
4p3g SIGNAL RECOGNITION PARTICLE SUBUNIT SRP68
Chaetomium thermophilum
-SER C 104
SER D 100
SER D 104
None
homomer
cyclic
24700861
4p5a THYMIDYLATE SYNTHASE THYX
Streptomyces cacaoi
Thy1SER A  20
SER A  69
SER D  20
None
homomer
dihedral
-
4q2u ANTITOXIN DINJ
MRNA INTERFERASE YAFQ
Escherichia coli
RelB
YafQ_toxin
SER A  61
SER A  65
SER B   9
None
heteromer
cyclic
24898247
4qk7 INFLUENZA M2 MONOMER
Influenza A virus
Flu_M2SER A  23
SER B  23
SER C  23
 CL A 102
homomer
cyclic
26578770
4r7y MINICHROMOSOME MAINTENANCE PROTEIN MCM, CELL DIVISION CONTROL PROTEIN 21
Pyrococcus furiosus,Saccharolobus solfataricus
MCM
MCM_N
MCM_OB
SER A1356
SER A1357
SER B1784
None
homomer
cyclic
25262915
4rkh E3 UBIQUITIN-PROTEIN LIGASE MSL-2
Drosophila melanogaster
-SER E 532
SER E 533
SER F 542
None
homomer
cyclic
25452275
4ru5 TAILSPIKE GP27
Pseudomonas phage phi297
-SER A 740
SER B 740
SER C 740
None
homomer
cyclic
29176754
4wzi CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 4B
Homo sapiens
PDEase_ISER A 243
SER A 247
SER B 524
None
homomer
cyclic
25775568
4x0n HELIANTHAMIDE
PANCREATIC ALPHA-AMYLASE
Stichodactyla helianthus
Sus scrofa
Alpha-amylase
Alpha-amylase_C
SER A 310
SER A 311
SER B1002
None
heteromer
asymmetric
-
4x57 MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3
UBIQUITIN-CONJUGATING ENZYME E2 8
Arabidopsis thaliana
Rad60-SLD_2
UQ_con
SER A  22
SER B  59
SER B  60
SO4 A 201
heteromer
asymmetric
-
4yzo PUTATIVE ACYL-COA ACYLTRANSFERASE
Sulfurisphaera tokodaii
Thiolase_C
Thiolase_N
SER A  56
SER A  69
SER C 363
None
homomer
cyclic
-
4z9c PERTUSSIS TOXIN-LIKE SUBUNIT ARTA
SUBTILASE CYTOTOXIN SUBUNIT B-LIKE PROTEIN
Escherichia coli
Pertussis_S1SER A 143
SER F 105
SER F 106
None
heteromer
asymmetric
28663369
5a9a POLYHEDRIN
Simulium ubiquitum cypovirus
CPV_PolyhedrinSER A 188
SER B 188
SER C 188
None
homomer
cyclic
26291392
5aa6 VANADIUM-DEPENDENT BROMOPEROXIDASE 2
Ascophyllum nodosum
-SER B 354
SER C 364
SER C 366
None
homomer
dihedral
-
5abs SH3 DOMAIN-CONTAINING KINASE-BINDING PROTEIN 1
Homo sapiens
-SER A 605
SER B 605
SER C 605
None
homomer
cyclic
27353366
5aew BIPHENYL DIOXYGENASE SUBUNIT BETA
Paraburkholderia xenovorans
-SER T 115
SER V 115
SER X 115
None
heteromer
cyclic
26953337
5ax6 COFB
Escherichia coli
-SER A 429
SER B 429
SER C 429
None
homomer
cyclic
26876601
5b04 PROBABLE TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA
TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA
Schizosaccharomyces pombe
IF-2BSER A 328
SER A 330
SER D 376
None
heteromer
cyclic
26901872
5bpk GAMMA-GLUTAMYLTRANSPEPTIDASE (GGT)
Helicobacter pylori
G_glu_transpeptSER A 192
SER A 193
SER C 408
None
heteromer
asymmetric
-
5c6g AGR133CP
SISTER CHROMATID COHESION PROTEIN 2
Eremothecium gossypii
Cohesin_loadSER A 474
SER A 529
SER B  16
None
heteromer
asymmetric
26212329
5dz8 BSPA (BSPA_V)
Streptococcus agalactiae
BspA_vSER A 422
SER A 423
SER B 446
None
homomer
cyclic
27311712
5eft P9-1
Southern rice black-streaked dwarf virus
Reo_P9SER B 269
SER B 270
SER D  76
None
homomer
asymmetric
-
5fq8 OUTER MEMBRANE PROTEIN OMP121
PUTATIVE LIPOPROTEIN
Bacteroides thetaiotaomicron
Plug
SusD-like_2
TonB_dep_Rec
SER A  25
SER A  29
SER B 630
None
heteromer
asymmetric
28077872
5fvn OMPC PORIN
Enterobacter cloacae
Porin_1SER A  71
SER B  71
SER C  71
None
homomer
cyclic
27493217
5g0a TRANSAMINASE
Bacillus megaterium
-SER B 184
SER B 187
SER C 187
None
homomer
dihedral
27428867
5g5o LH3 HEXON-INTERLACING CAPSID PROTEIN
Snake atadenovirus A
Adeno_E1B_55KSER D 212
SER E 212
SER F 212
None
homomer
cyclic
28943338
5ha6 SYNCYTIN-1
Homo sapiens
TLV_coatSER A 343
SER B 343
SER C 343
None
homomer
cyclic
-
5hi4 CAT-2000 FAB HEAVY CHAIN
INTERLEUKIN-17A
Homo sapiens
C1-set
V-set
IL17
SER A  41
SER C  30
SER C  31
None
heteromer
cyclic
27527709
5hlj VP24
White spot syndrome virus
WSS_VPSER A 137
SER B 139
SER B 193
None
homomer
cyclic
27572278
5i34 ADENYLOSUCCINATE SYNTHETASE
Cryptococcus neoformans
Adenylsucc_syntSER A 247
SER A 249
SER B 255
None
homomer
cyclic
27759389
5jea EXOSOME COMPLEX COMPONENT CSL4
EXOSOME COMPLEX COMPONENT MTR3
Saccharomyces cerevisiae
EXOSC1
RNase_PH
SER F  82
SER I 194
SER I 195
None
heteromer
asymmetric
27345150
5jgf VACUOLAR AMINOPEPTIDASE 1
Saccharomyces cerevisiae
Peptidase_M18SER A 206
SER B 477
SER B 480
None
homomer
tetrahedral
27320913
5jxc RAS/RAP GTPASE-ACTIVATING PROTEIN SYNGAP
Mus musculus
DUF3498SER A1209
SER B1209
SER C1209
None
homomer
asymmetric
27565345
5ljx ENVELOPMENT POLYPROTEIN
Hantaan orthohantavirus
Hanta_G2SER A  34
SER B 358
SER B 372
None
homomer
cyclic
27783711
5mr4 GDNF FAMILY RECEPTOR ALPHA-2
NEURTURIN
Homo sapiens
GDNF
GDNF
TGF_beta
SER A 175
SER C 179
SER C 183
None
heteromer
cyclic
29414779
5mzw GLUTACONATE COA-TRANSFERASE FAMILY, SUBUNIT A
GLUTACONATE COA-TRANSFERASE FAMILY, SUBUNIT B
Myxococcus xanthus
CoA_transSER A  79
SER B  70
SER B  71
None
heteromer
cyclic
28508504
5o1r IGH@ PROTEIN
UNCHARACTERIZED PROTEIN
Homo sapiens
C1-set
V-set
SER H 189
SER L 161
SER L 175
None
heteromer
asymmetric
30133484
5o7h CAS5FV
CAS7FV
Shewanella putrefaciens
-SER E 176
SER F 319
SER F 320
None
heteromer
asymmetric
28781236
5obt VACUOLAR-PROCESSING ENZYME GAMMA-ISOZYME
Arabidopsis thaliana
Peptidase_C13SER A 241
SER A 247
SER E 309
None
heteromer
asymmetric
29628443
5t5i TUNGSTEN FORMYLMETHANOFURAN DEHYDROGENASE SUBUNIT FWDF
Methanothermobacter wolfeii
Fer4
Fer4_7
SER F 177
SER F 178
SER N 287
None
heteromer
cyclic
27846502
5tcs KINETOCHORE PROTEIN NDC80
KINETOCHORE PROTEIN NUF2
Saccharomyces cerevisiae
Ndc80_HEC
Nuf2
SER A 242
SER B  59
SER B  63
None
heteromer
asymmetric
27851957
5u1a FERRITIN,MTRE PROTEIN CHIMERA
Helicobacter pylori,Neisseria gonorrhoeae
-SER B  87
SER E  87
SER E  89
None
homomer
octahedral
28781959
5u1b MTRE PROTEIN,FERRITIN CHIMERA
Helicobacter pylori,Neisseria gonorrhoeae
FerritinSER A  72
SER B  72
SER B  74
None
homomer
octahedral
28781959
5vi4 INTERLEUKIN-1 RECEPTOR-LIKE 1
INTERLEUKIN-33
Mus musculus
IL33
Ig_2
SER A 130
SER A 147
SER B 126
None
heteromer
asymmetric
28930661
5vmk BIFUNCTIONAL PROTEIN GLMU
Acinetobacter baumannii
-SER B 442
SER C 432
SER C 434
None
homomer
cyclic
-
5wgc DAUNORUBICIN-DOXORUBICIN POLYKETIDE SYNTHASE
Streptomyces peucetius
ACP_syn_III_CSER A  98
SER B 190
SER B 332
None
homomer
cyclic
29620883
5wqp PROBABLE DEHYDROGENASE
Pseudomonas aeruginosa
adh_shortSER A 145
SER B 160
SER B 164
None
homomer
cyclic
28524228
5xlu GAMMA GLUTAMYL TRANSPEPTIDASE
Bacillus licheniformis
G_glu_transpeptSER A 288
SER A 289
SER B 461
AVN B 602
heteromer
asymmetric
-
5xu0 MEMBRANE-FUSION PROTEIN
Streptococcus pneumoniae
HlyD_D23SER A 215
SER A 217
SER B 222
None
homomer
cyclic
29335499
5y6a CHAIN A AND B
Listeria monocytogenes
-SER A  45
SER A  49
SER B 105
None
homomer
cyclic
29182776
5y6q ALDEHYDE OXIDASE MEDIUM SUBUNIT
ALDEHYDE OXIDASE SMALL SUBUNIT
Methylobacillus sp. KY4400
CO_deh_flav_C
Fer2
FAD_binding_5
Fer2_2
SER A 134
SER B 237
SER B 238
None
heteromer
asymmetric
29319807
5yzc GLYCOPROTEIN F1,MEASLES VIRUS FUSION PROTEIN
Measles morbillivirus
Fusion_glySER B 480
SER D 480
SER F 480
None
heteromer
cyclic
29463726
5z1g RIBOSOME BIOGENESIS PROTEIN BRX1
RRNA-PROCESSING PROTEIN EBP2
Saccharomyces cerevisiae
Brix
Ebp2
SER A 250
SER D 138
SER D 178
None
heteromer
asymmetric
29557065
6byw GOXA
Pseudoalteromonas luteoviolacea
LodA_C
LodA_N
SER A 308
SER A 310
SER D 781
None
homomer
dihedral
29381339
6cl6 TAIL FIBER PROTEIN
Pseudomonas aeruginosa
-SER A 469
SER A 471
SER B 496
EDO A 705
homomer
asymmetric
30110933
6cv6 3-DEHYDROQUINATE DEHYDRATASE
Paraburkholderia phymatum
DHquinase_IISER A  53
SER B  53
SER E  53
None
homomer
cyclic
-
6czm ATP PHOSPHORIBOSYLTRANSFERASE CATALYTIC SUBUNIT
Medicago truncatula
HisG
HisG_C
SER A 307
SER B 307
SER C 307
None
homomer
dihedral
30072492
6elc VARIANT SURFACE GLYCOPROTEIN
Trypanosoma brucei
VSG_BSER A 288
SER B 288
SER C 288
None
homomer
cyclic
29988048
6fij POLYKETIDE SYNTHASE
Cercospora nicotianae
Acyl_transf_1
Ketoacyl-synt_C
SAT
ketoacyl-synt
SER A 943
SER A 998
SER B  55
None
homomer
cyclic
29610486
6g3e ARGININOSUCCINATE LYASE
Chelativorans sp. BNC1
ASL_C2
Lyase_1
SER A 111
SER C 280
SER C 281
FMT C 601
homomer
dihedral
29741885