PDBID Molecule/
Organism
Pfam Residues HETATM Symmetry Pubmed View
1csb CATHEPSIN B HEAVY CHAIN
CATHEPSIN B LIGHT CHAIN
Homo sapiens
Peptidase_C1VAL A  35
VAL B  54
LEU B  59
LEU B  88
None
heteromer
asymmetric
7718586
1ept PORCINE E-TRYPSIN
Sus scrofa
TrypsinVAL A  31
LEU A  46
VAL A  52
LEU B  67
None
heteromer
asymmetric
7947985
1gpm GMP SYNTHETASE
Escherichia coli
GATase
GMP_synt_C
NAD_synthase
LEU A 452
VAL A 454
VAL A 469
LEU C 452
None
homomer
dihedral
8548458
1jy2 FIBRINOGEN ALPHA CHAIN
FIBRINOGEN BETA CHAIN
FIBRINOGEN GAMMA-B CHAIN
Bos taurus
Fib_alphaLEU N  76
VAL O 111
VAL O 114
LEU P  47
None
heteromer
cyclic
11593005
1n9e LYSYL OXIDASE
Komagataella pastoris
Cu_amine_oxid
Cu_amine_oxidN2
DUF1965
LEU A 325
VAL A 326
LEU B 325
VAL B 326
None
homomer
cyclic
14690425
1sj2 PEROXIDASE/CATALASE T
Mycobacterium tuberculosis
peroxidaseVAL A  30
VAL B  47
LEU B  48
LEU B 611
None
homomer
cyclic
15231843
1u0t INORGANIC POLYPHOSPHATE/ATP-NAD KINASE
Mycobacterium tuberculosis
NAD_kinaseLEU A 293
VAL A 294
LEU A 299
VAL B 183
None
homomer
dihedral
15269221
1utg UTEROGLOBIN
Oryctolagus cuniculus
UteroglobinVAL A  44
LEU A  45
LEU A  48
VAL B  44
None
homomer
cyclic
3656405
1vla HYDROPEROXIDE RESISTANCE PROTEIN OSMC
Thermotoga maritima
OsmCVAL A  42
VAL B  42
LEU B  43
LEU B  46
None
homomer
cyclic
-
1wwm HYPOTHETICAL PROTEIN TT2028
Thermus thermophilus
-VAL A  50
LEU A  53
LEU A  68
VAL B  50
None
homomer
cyclic
-
1xa3 CROTONOBETAINYL-COA:CARNITINE COA-TRANSFERASE
Escherichia coli
CoA_transf_3LEU A 151
LEU B 238
VAL B 247
VAL B 322
None
homomer
cyclic
15518548
1zud ADENYLYLTRANSFERASE THIF
Escherichia coli
ThiFLEU 1 200
LEU 1 203
VAL 3 193
VAL 3 196
None
heteromer
cyclic
16388576
2aq6 PYRIDOXINE 5'-PHOSPHATE OXIDASE
Mycobacterium tuberculosis
Putative_PNPOxVAL A  21
LEU A  33
VAL B  21
LEU B  70
None
homomer
cyclic
16239726
2axt PHOTOSYSTEM II CP43 PROTEIN
PHOTOSYSTEM Q(B) PROTEIN
Thermosynechococcus elongatus
PSII
Photo_RC
VAL A 145
LEU C 438
VAL C 439
LEU C 442
CLA C 495
heteromer
cyclic
16355230
2buf ACETYLGLUTAMATE KINASE
Pseudomonas aeruginosa
-VAL B  14
LEU B  15
VAL C  11
LEU C  15
None
homomer
dihedral
16376937
2cdc GLUCOSE DEHYDROGENASE GLUCOSE 1-DEHYDROGENASE, DHG-1
Saccharolobus solfataricus
ADH_N
Glu_dehyd_C
VAL A 258
VAL A 285
LEU C 287
LEU C 292
None
homomer
dihedral
16556607
2dg7 PUTATIVE TRANSCRIPTIONAL REGULATOR
Streptomyces coelicolor
TetR_NLEU A  80
VAL A 146
LEU A 149
VAL B 184
None
homomer
cyclic
-
2e1m L-GLUTAMATE OXIDASE
Streptomyces sp. X-119-6
Amino_oxidaseVAL A  46
LEU A  47
LEU A  76
VAL C 662
None
heteromer
cyclic
19531050
2e54 ACETYLORNITHINE AMINOTRANSFERASE
Thermotoga maritima
Aminotran_3LEU A 131
LEU A 149
VAL A 150
VAL B 150
None
homomer
cyclic
-
2elc ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
Thermus thermophilus
Glycos_trans_3N
Glycos_transf_3
VAL A  40
LEU A  44
VAL D  40
LEU D  44
None
homomer
cyclic
-
2f0c PHAGE TP901-1 ORF49 (BPP)
Lactococcus phage TP901-1
Caudo_bapla_RBPLEU A  62
VAL B  56
LEU B  60
VAL C  54
None
homomer
cyclic
16549427
2fhl AVIDIN-RELATED PROTEIN 4/5
Gallus gallus
AvidinVAL A  76
LEU A  96
VAL B 276
LEU B 296
None
homomer
dihedral
16546211
2fn0 SALICYLATE SYNTHETASE, IRP9
Yersinia enterocolitica
Chorismate_bindVAL A 307
LEU A 310
VAL B 307
LEU B 310
None
homomer
cyclic
16434053
2fq4 TRANSCRIPTIONAL REGULATOR, TETR FAMILY
Bacillus cereus
TetR_C_11
TetR_N
LEU A 167
VAL A 168
VAL B 107
LEU B 167
None
homomer
cyclic
-
2hy6 GENERAL CONTROL PROTEIN GCN4
Saccharomyces cerevisiae
-VAL A  24
LEU A  27
VAL B  24
LEU G  20
None
homomer
helical
17030805
2oat ORNITHINE AMINOTRANSFERASE
Homo sapiens
Aminotran_3VAL A  98
LEU A 101
LEU A 298
VAL D 105
None
homomer
cyclic
9878407
2opl HYPOTHETICAL PROTEIN
Geobacter sulfurreducens
OsmCLEU A  76
VAL B  10
VAL B  12
LEU B  15
None
homomer
cyclic
-
2pmy RAS AND EF-HAND DOMAIN-CONTAINING PROTEIN
Homo sapiens
EF-hand_7VAL A  50
LEU A  54
LEU B  40
VAL B  42
None
homomer
cyclic
-
2prg NUCLEAR RECEPTOR COACTIVATOR SRC-1
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA
Homo sapiens
Hormone_recep
SRC-1
VAL A 315
LEU A 318
LEU C 633
VAL C 634
BRL A   1
heteromer
asymmetric
9744270
2q30 UNCHARACTERIZED PROTEIN
Desulfovibrio alaskensis
Cupin_2VAL A  59
VAL A  82
LEU B  10
LEU B 102
None
homomer
cyclic
-
2q73 HYPOTHETICAL PROTEIN
Vibrio sp. DAT722
MazGLEU A  34
LEU A  59
VAL A  62
VAL B  66
None
homomer
dihedral
17892463
2qbu PRECORRIN-2 METHYLTRANSFERASE
Methanothermobacter thermautotrophicus
TP_methylaseLEU A 153
VAL A 165
LEU B 153
VAL B 165
None
homomer
cyclic
17567575
2qkt INACTIVATION-NO-AFTER-POTENTIAL D PROTEIN
Drosophila melanogaster
PDZLEU A 640
VAL A 644
LEU C 640
VAL C 644
None
homomer
cyclic
17923089
2qve TYROSINE AMINOMUTASE
Streptomyces globisporus
Lyase_aromaticLEU A 406
VAL C  77
LEU C  85
VAL D 297
None
homomer
dihedral
18078753
2siv SIV GP41 GLYCOPROTEIN
Simian immunodeficiency virus
-LEU A 576
VAL A 580
VAL C 580
LEU E 576
NH2 C 582
homomer
cyclic
9689046
2uv4 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1
Homo sapiens
CBSLEU A 217
VAL A 221
LEU B 319
VAL B 323
None
homomer
cyclic
17452784
2vgl AP-2 COMPLEX SUBUNIT BETA-1
AP-2 COMPLEX SUBUNIT MU-1
Homo sapiens
Rattus norvegicus
Adap_comp_sub
Clat_adaptor_s
Adaptin_N
VAL B 365
LEU M 175
LEU M 404
VAL M 422
None
heteromer
asymmetric
12086608
2x2s AGGLUTININ
Sclerotinia sclerotiorum
-LEU C  53
VAL C  54
VAL D   6
LEU D  53
None
homomer
cyclic
20566411
2y2z PUTATIVE REPRESSOR SIMREG2
Streptomyces antibioticus
TetR_C
TetR_N
VAL A 150
LEU A 153
LEU A 154
VAL B 211
None
homomer
cyclic
21354180
2z08 UNIVERSAL STRESS PROTEIN FAMILY
Thermus thermophilus
UspLEU A 118
LEU A 135
VAL C 126
VAL C 133
None
homomer
dihedral
-
2zsh DELLA PROTEIN GAI
PROBABLE GIBBERELLIN RECEPTOR GID1L1
Arabidopsis thaliana
Abhydrolase_3
DELLA
VAL A  22
VAL B  46
LEU B  50
LEU B  84
None
heteromer
asymmetric
19037309
2zzd THIOCYANATE HYDROLASE SUBUNIT BETA
THIOCYANATE HYDROLASE SUBUNIT GAMMA
Thiobacillus thioparus
NHase_alpha
NHase_beta
VAL C 142
LEU C 148
LEU C 152
VAL B  24
None
heteromer
dihedral
19785438
3a1m CHIMERA OF THROMBIN CLEAVAGE SITE, TAIL-ASSOCIATED LYSOZYME, FIBRITIN
Escherichia virus T4
Fibritin_C
Gp5_C
VAL A 118
LEU B 127
VAL C 118
LEU C 127
None
homomer
dihedral
20661999
3b0z FLAGELLAR BIOSYNTHETIC PROTEIN FLHB
Salmonella enterica
Bac_export_2VAL A 267
VAL B 275
LEU B 318
LEU B 322
None
heteromer
asymmetric
23633590
3c3y O-METHYLTRANSFERASE
Mesembryanthemum crystallinum
Methyltransf_3VAL A  65
LEU A  68
VAL A  69
LEU B  68
None
homomer
cyclic
18342334
3ci9 HEAT SHOCK FACTOR-BINDING PROTEIN 1
Homo sapiens
HSBP1LEU A  12
VAL D  15
VAL D  16
LEU D  19
None
homomer
dihedral
18767159
3ckj PUTATIVE UNCHARACTERIZED PROTEIN
Mycobacterium avium
Glycos_transf_2LEU A 194
VAL B 191
LEU B 194
VAL B 195
None
homomer
cyclic
18667419
3dkx REPLICATION PROTEIN REPB
Streptococcus agalactiae
Rep_2LEU B  77
VAL C  89
VAL C  90
LEU C  91
None
homomer
cyclic
19440202
3duk NTF2-LIKE PROTEIN OF UNKNOWN FUNCTION
Methylobacillus flagellatus
Lumazine_bd_2LEU A 103
VAL A 119
VAL D  85
LEU D 105
None
homomer
dihedral
-
3fij LIN1909 PROTEIN
Listeria innocua
Peptidase_C26VAL G   6
LEU G  61
VAL G  62
LEU H  61
None
homomer
dihedral
-
3fm2 UNCHARACTERIZED PROTEIN, DISTANTLY RELATED TO A HEME BINDING/DEGRADING HEMS (PF05171) FAMILY
Trichormus variabilis
ChuX_HutXVAL A  22
LEU A  29
VAL B  22
LEU B  29
None
homomer
cyclic
-
3g13 PUTATIVE CONJUGATIVE TRANSPOSON RECOMBINASE
Clostridioides difficile
ResolvaseLEU A 125
VAL A 128
LEU A 129
VAL B 128
None
homomer
cyclic
-
3g80 PROTEIN B2
Nodamura virus
-VAL A  39
LEU A  43
VAL B  70
LEU B  74
None
homomer
cyclic
19249868
3god CAS1
Pseudomonas aeruginosa
Cas_Cas1LEU A 116
VAL A 120
VAL C 120
LEU C 250
None
homomer
asymmetric
19523907
3i5a RESPONSE REGULATOR/GGDEF DOMAIN PROTEIN
Pseudomonas syringae group genomosp. 3
GGDEF
Response_reg
VAL A 164
LEU A 165
LEU A 168
VAL B 164
None
homomer
dihedral
19695263
3if8 PROTEIN ZWILCH HOMOLOG
Homo sapiens
ZwilchLEU A 227
LEU A 249
VAL B 514
VAL B 519
None
heteromer
asymmetric
20462495
3k1i FLAGELLAR PROTEIN
PUTATIVE UNCHARACTERIZED PROTEIN
Helicobacter pylori
FliSVAL A  96
VAL D  44
LEU D  47
LEU D 139
None
heteromer
asymmetric
20581225
3l4f RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 7
Rattus norvegicus
betaPIX_CCLEU A 628
VAL A 629
VAL A 632
LEU C 633
None
heteromer
asymmetric
20117114
3m0a TNF RECEPTOR-ASSOCIATED FACTOR 2
Homo sapiens
TRAF_BIRC3_bdVAL A 286
LEU A 289
LEU B 289
VAL C 286
None
heteromer
asymmetric
20385093
3o1k DIHYDRONEOPTERIN ALDOLASE FOLB, PUTATIVE
Vibrio cholerae
FolBVAL A  59
VAL D  29
LEU D  82
LEU D  83
None
homomer
dihedral
-
3of4 NITROREDUCTASE
Idiomarina loihiensis
NitroreductaseVAL A 206
VAL A 207
LEU A 208
LEU B  48
None
homomer
cyclic
-
3pgb PUTATIVE UNCHARACTERIZED PROTEIN
Aspergillus nidulans
Cu_amine_oxid
DUF1965
LEU A 436
LEU A 790
VAL B 485
VAL B 759
None
homomer
cyclic
21604787
3qyh CO-TYPE NITRILE HYDRATASE ALPHA SUBUNIT
CO-TYPE NITRILE HYDRATASE BETA SUBUNIT
Pseudomonas putida
NHase_alpha
NHase_beta
VAL A  46
VAL B 111
LEU B 114
LEU B 115
None
heteromer
asymmetric
21473592
3rko NADH-QUINONE OXIDOREDUCTASE SUBUNIT A
NADH-QUINONE OXIDOREDUCTASE SUBUNIT J
Escherichia coli
Oxidored_q3
Oxidored_q4
VAL A  80
LEU A  83
LEU J  54
VAL J  58
None
heteromer
asymmetric
21822288
3soo LINE-1 TYPE TRANSPOSASE DOMAIN-CONTAINING PROTEIN 1
Homo sapiens
Tnp_22_dsRBDLEU A 313
VAL A 316
LEU A 317
VAL B 263
None
homomer
cyclic
-
3tso RAB11 FAMILY-INTERACTING PROTEIN 2
Homo sapiens
RBD-FIPVAL C 456
LEU C 460
VAL D 456
LEU D 460
None
heteromer
cyclic
-
3u6x BPP
Lactococcus phage TP901-1
Caudo_bapla_RBPLEU A  62
VAL B  54
VAL C  56
LEU C  60
None
heteromer
cyclic
22611190
3uep YSCQ-C, TYPE III SECRETION PROTEIN
Yersinia pseudotuberculosis
FliMN_CLEU A 249
LEU A 254
VAL B 238
VAL B 240
None
homomer
cyclic
22320351
3vp5 TRANSCRIPTIONAL REGULATOR
Lactococcus lactis
TetR_NLEU A 175
VAL A 176
LEU A 180
VAL B 176
None
homomer
cyclic
22798069
4d3d IMINE REDUCTASE
Bacillus cereus
NAD_binding_2LEU A 200
VAL B 280
VAL B 283
LEU B 300
None
homomer
cyclic
25809902
4dyl TYROSINE-PROTEIN KINASE FES/FPS
Homo sapiens
-LEU A 236
VAL A 237
LEU B 236
VAL B 237
None
homomer
cyclic
-
4gip FUSION GLYCOPROTEIN F1
FUSION GLYCOPROTEIN F2
Mammalian rubulavirus 5
Fusion_glyVAL A  51
VAL D 165
LEU D 227
LEU D 228
None
heteromer
cyclic
23012473
4i7z CYTOCHROME B6
CYTOCHROME B6-F COMPLEX SUBUNIT 5
Mastigocladus laminosus
Cytochrome_B
PetG
LEU A  95
LEU A  99
VAL G  10
VAL G  14
BCR G 101
heteromer
cyclic
23514009
4icg DNA-BINDING PROTEIN H-NS
Salmonella enterica
-LEU B  14
LEU A  33
VAL A  36
VAL A  37
None
heteromer
cyclic
23515315
4jmf EXOENZYME T
PROBABLE CHAPERONE
Pseudomonas aeruginosa
CesTLEU A  53
LEU A  57
VAL B  32
VAL B 109
None
heteromer
asymmetric
24387107
4jn6 4-HYDROXY-2-OXOVALERATE ALDOLASE
Mycobacterium tuberculosis
DmpG_comm
HMGL-like
VAL A 174
LEU A 203
LEU A 205
VAL C 243
None
heteromer
cyclic
23614353
4lms CRYPTOPHYTE PHYCOCYANIN (ALPHA-1 CHAIN)
CRYPTOPHYTE PHYCOCYANIN (BETA CHAIN)
Chroomonas sp.
Phycobilisome
Phycoerythr_ab
VAL A  39
VAL B  19
LEU B  24
LEU B  27
P6G B 204
heteromer
asymmetric
24979784
4mjz OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
Toxoplasma gondii
OMPdecaseVAL A 179
LEU A 192
VAL B 179
LEU B 192
None
homomer
cyclic
-
4rit PYRIDOXAL-DEPENDENT DECARBOXYLASE
Sphaerobacter thermophilus
Pyridoxal_deCVAL B  29
VAL B  30
LEU A 101
LEU A 104
None
homomer
cyclic
-
4wvr DOWN SYNDROME CELL ADHESION MOLECULE, ISOFORM AK
Drosophila melanogaster
Ig_3LEU A  62
VAL A  68
LEU D  60
VAL D  68
None
homomer
cyclic
27386517
4wy4 SYNTAXIN-17
VESICLE-ASSOCIATED MEMBRANE PROTEIN 8
Homo sapiens
SynaptobrevinVAL A  20
VAL A  23
LEU B 179
LEU B 182
None
heteromer
asymmetric
25686604
4xso ALR3699 PROTEIN
Nostoc sp. PCC 7120
Glyco_transf_4
Glycos_transf_1
VAL B 103
VAL B 104
LEU A  74
LEU A  77
None
homomer
cyclic
26692049
4zp3 A-KINASE ANCHOR PROTEIN 7 ISOFORMS ALPHA AND BETA
CAMP-DEPENDENT PROTEIN KINASE TYPE II-ALPHA REGULATORY SUBUNIT
Homo sapiens
AKAP7_RIRII_bdg
RIIa
VAL A  18
LEU A  21
LEU M  52
VAL M  53
None
heteromer
asymmetric
27102985
5a1i S-ADENOSYLMETHIONINE SYNTHASE ISOFORM TYPE-2
Homo sapiens
S-AdoMet_synt_C
S-AdoMet_synt_M
S-AdoMet_synt_N
VAL A  59
LEU A 261
VAL D  59
LEU D 261
None
homomer
dihedral
26858410
5dwz 3-OXOACYL-(ACYL CARRIER PROTEIN) SYNTHASE III
3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
Pseudomonas aeruginosa
ACP_syn_III
ACP_syn_III_C
LEU C 138
VAL B 109
VAL B 110
LEU B 113
None
heteromer
cyclic
26811339
5e97 HEPARANASE
Homo sapiens
Glyco_hydro_79nVAL A 423
LEU A 464
VAL B  39
LEU B  41
None
heteromer
asymmetric
26575439
5jm8 AEROBACTIN SYNTHASE IUCA
Klebsiella pneumoniae
FhuF
IucA_IucC
LEU A 434
VAL A 439
LEU E 434
VAL E 439
None
homomer
dihedral
27253399
5jxc RAS/RAP GTPASE-ACTIVATING PROTEIN SYNGAP
Mus musculus
DUF3498LEU A1270
VAL B1266
VAL C1266
LEU C1270
None
homomer
asymmetric
27565345
5n07 HTH-TYPE TRANSCRIPTIONAL REPRESSOR NSRR
Streptomyces coelicolor
Rrf2LEU A   3
VAL B  90
VAL B  91
LEU B 111
None
homomer
cyclic
28425466
5tw7 GMP SYNTHASE [GLUTAMINE-HYDROLYZING]
Neisseria gonorrhoeae
GATase
GMP_synt_C
NAD_synthase
LEU A 403
LEU A 448
VAL A 450
VAL D 450
None
homomer
cyclic
-
5u1t SECURIN
SEPARIN
Saccharomyces cerevisiae
Peptidase_C50
Securin
VAL A 117
LEU A 169
LEU B 371
VAL B 372
None
heteromer
asymmetric
28146474
5ubp 26S PROTEASOME COMPLEX SUBUNIT SEM1
NUCLEAR MRNA EXPORT PROTEIN THP1
Saccharomyces cerevisiae
DSS1_SEM1
PCI
VAL B 350
VAL B 371
LEU C  77
LEU C  81
None
heteromer
asymmetric
28334829
5vit MDCA
MDCC
Pseudomonas aeruginosa
Pseudomonas protegens
ACP
Mal_decarbox_Al
VAL A 236
LEU A 239
VAL C  84
LEU C  87
None
heteromer
asymmetric
28757619
5wxx MCYF
Microcystis aeruginosa
Asp_Glu_raceLEU A  23
VAL A  44
LEU B  23
VAL B  44
None
homomer
cyclic
31101340
6c5d LLAJI.R1
Helicobacter pylori
-VAL A   3
LEU B 119
LEU B 126
VAL B 128
None
homomer
cyclic
29895618
6cf6 TANKYRASE-1
Mus musculus
Ank
Ank_2
VAL A 533
LEU A 536
LEU B 495
VAL B 498
None
monomer
asymmetric
29604130