PDBID Molecule/
Organism
Pfam Residues HETATM Symmetry Pubmed View
1d3b PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3)
Homo sapiens
LSMLEU A  10
LEU A  71
LEU A  73
LEU B  71
None
heteromer
asymmetric
10025403
1ds6 RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 2
RHO GDP-DISSOCIATION INHIBITOR 2
Homo sapiens
Ras
Rho_GDI
LEU A  67
LEU A  70
LEU B  52
LEU B  53
None
heteromer
asymmetric
10655614
1ebo EBOLA VIRUS ENVELOPE PROTEIN CHIMERA CONSISTING OF A FRAGMENT OF GCN4 ZIPPER CLONED N-TERMINAL TO A FRAGMENT OF GP2
Ebola virus sp.
-LEU A  57
LEU B  57
LEU C  53
LEU C  57
None
homomer
asymmetric
9844633
1ehi D-ALANINE:D-LACTATE LIGASE
Leuconostoc mesenteroides
Dala_Dala_lig_C
Dala_Dala_lig_N
LEU A 114
LEU B 514
LEU B 517
LEU B 518
None
homomer
cyclic
10801495
1eno ENOYL ACYL CARRIER PROTEIN REDUCTASE
Brassica napus
adh_short_C2LEU A 148
LEU B 170
LEU B 174
LEU B 216
None
homomer
dihedral
8535786
1f2t RAD50 ABC-ATPASE
Pyrococcus furiosus
AAA_21
AAA_23
LEU A 147
LEU B 789
LEU B 792
LEU B 800
None
heteromer
asymmetric
10892749
1g8l MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN
Escherichia coli
MoCF_biosynth
MoeA_C
MoeA_N
LEU A  32
LEU A 161
LEU B 207
LEU B 211
None
homomer
cyclic
11525167
1n6j MYOCYTE-SPECIFIC ENHANCER FACTOR 2B
Homo sapiens
SRF-TFLEU A  28
LEU A  45
LEU B  28
LEU B  45
None
heteromer
asymmetric
12700764
1ni5 PUTATIVE CELL CYCLE PROTEIN MESJ
Escherichia coli
ATP_bind_3
TilS
TilS_C
LEU A 222
LEU A 223
LEU B 222
LEU B 223
None
homomer
cyclic
-
1nlw MAD PROTEIN
MAX PROTEIN
Homo sapiens
HLHLEU A  21
LEU A  24
LEU A  42
LEU B 243
None
homomer
cyclic
12553908
1o9y HRCQ2
Pseudomonas syringae
FliMN_CLEU A  19
LEU D  26
LEU D  28
LEU D  42
None
homomer
cyclic
14694203
1sui CAFFEOYL-COA O-METHYLTRANSFERASE
Medicago sativa
Methyltransf_3LEU A  24
LEU A  29
LEU C  23
LEU C 192
None
homomer
cyclic
15734921
1uwk UROCANATE HYDRATASE
Pseudomonas putida
Urocanase
Urocanase_C
Urocanase_N
LEU A 472
LEU A 488
LEU B 472
LEU B 488
None
homomer
cyclic
15313616
1wyu GLYCINE DEHYDROGENASE (DECARBOXYLATING) SUBUNIT 1
GLYCINE DEHYDROGENASE SUBUNIT 2 (P-PROTEIN)
Thermus thermophilus
GDC-PLEU C  15
LEU C  23
LEU C  26
LEU D 351
None
heteromer
cyclic
15791207
1xxa ARGININE REPRESSOR
Escherichia coli
Arg_repressor_CLEU B 107
LEU F  82
LEU F  85
LEU F 107
None
homomer
dihedral
8594204
2b1y HYPOTHETICAL PROTEIN ATU1913
Agrobacterium fabrum
DUF1883LEU A  13
LEU A  22
LEU A  34
LEU B  73
None
homomer
cyclic
-
2czv RIBONUCLEASE P PROTEIN COMPONENT 2
RIBONUCLEASE P PROTEIN COMPONENT 3
Pyrococcus horikoshii
RNase_P_Rpp14
RNase_P_p30
LEU A 131
LEU A 134
LEU A 135
LEU C  86
None
heteromer
cyclic
16430919
2esn PROBABLE TRANSCRIPTIONAL REGULATOR
Pseudomonas aeruginosa
HTH_1
LysR_substrate
LEU A  82
LEU D   5
LEU D  10
LEU D  13
None
homomer
cyclic
-
2fb9 D-ALANINE:D-ALANINE LIGASE
Thermus caldophilus
Dala_Dala_lig_C
Dala_Dala_lig_N
LEU A 115
LEU A 121
LEU B 115
LEU B 121
None
homomer
cyclic
16779845
2ftz GERANYLTRANSTRANSFERASE
Thermotoga maritima
polyprenyl_syntLEU A  76
LEU A 101
LEU B  76
LEU B 101
None
homomer
cyclic
-
2hwj HYPOTHETICAL PROTEIN ATU1540
Agrobacterium fabrum
ParBc_2LEU A   9
LEU A  84
LEU C   9
LEU C  84
None
homomer
dihedral
-
2j6p SB(V)-AS(V) REDUCTASE
Leishmania major
RhodaneseLEU A 129
LEU A 141
LEU B 129
LEU B 141
None
homomer
cyclic
18687336
2olz INSULIN A
INSULIN B
Homo sapiens
InsulinLEU E  13
LEU F  17
LEU I  13
LEU J  17
RCO E 602
RCO I 606
heteromer
dihedral
18093308
2p4w TRANSCRIPTIONAL REGULATORY PROTEIN ARSR FAMILY
Pyrococcus furiosus
HTH_5LEU A  86
LEU B  21
LEU B  52
LEU B  57
None
homomer
cyclic
17434531
2qde MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FAMILY PROTEIN
Aromatoleum aromaticum
MR_MLE_C
MR_MLE_N
LEU B 252
LEU B 255
LEU B 286
LEU D 289
None
homomer
dihedral
-
2qtv PROTEIN TRANSPORT PROTEIN SEC23
PROTEIN TRANSPORT PROTEIN SEC31
Saccharomyces cerevisiae
Gelsolin
Sec23_BS
Sec23_helical
Sec23_trunk
Sec31
zf-Sec23_Sec24
LEU A 702
LEU A 708
LEU D 925
LEU D 927
None
heteromer
asymmetric
17981133
2qud COAT PROTEIN
Pseudomonas phage PP7
Phage_coatLEU A   6
LEU A  59
LEU B 105
LEU B 109
None
homomer
cyclic
18066080
2r1r RIBONUCLEOTIDE REDUCTASE R1 PROTEIN
RIBONUCLEOTIDE REDUCTASE R2 PROTEIN
Escherichia coli
ATP-cone
Ribonuc_red_lgC
Ribonuc_red_lgN
LEU A 347
LEU A 348
LEU A 715
LEU D 370
None
monomer
asymmetric
9309223
2r41 UNCHARACTERIZED PROTEIN
Enterococcus faecalis
DUF960LEU A  31
LEU A  35
LEU C  31
LEU C  35
None
homomer
dihedral
-
2v6x DOA4-INDEPENDENT DEGRADATION PROTEIN 4
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 4
Saccharomyces cerevisiae
MITLEU A  37
LEU A  64
LEU B 225
LEU B 228
None
heteromer
asymmetric
17928861
2vkj TM1634
Thermotoga maritima
-LEU A  29
LEU A  33
LEU B  29
LEU B  33
None
homomer
asymmetric
18369189
2w7z PENTAPEPTIDE REPEAT FAMILY PROTEIN
Enterococcus faecalis
Pentapeptide_4LEU A 169
LEU A 189
LEU A 192
LEU B 208
LP6 A 193
homomer
cyclic
19390151
2xko GLOBAL NITROGEN REGULATOR
Synechococcus elongatus
HTH_Crp_2
cNMP_binding
LEU A 122
LEU A 125
LEU B 122
LEU B 125
None
heteromer
cyclic
20716687
2y96 DUAL SPECIFICITY PHOSPHATASE DUPD1
Homo sapiens
DSPcLEU A  41
LEU B 170
LEU B 190
LEU B 193
None
homomer
dihedral
21543850
2z5b PROTEIN YPL144W
UNCHARACTERIZED PROTEIN YLR021W
Saccharomyces cerevisiae
POC3_POC4LEU A  56
LEU A  86
LEU B  39
LEU B 142
None
heteromer
asymmetric
18278057
3a8r PUTATIVE UNCHARACTERIZED PROTEIN
Oryza sativa
EF-hand_7
NADPH_Ox
LEU A 149
LEU A 234
LEU B 298
LEU B 302
None
homomer
cyclic
19864426
3eaq HEAT RESISTANT RNA DEPENDENT ATPASE
Thermus thermophilus
Helicase_CLEU A 417
LEU B 380
LEU B 384
LEU B 418
None
homomer
cyclic
19050012
3g33 CCND3 PROTEIN
Homo sapiens
Cyclin_C
Cyclin_N
LEU B 177
LEU B 215
LEU D 188
LEU D 251
None
heteromer
cyclic
19237555
3g8l LECTIN-RELATED NK CELL RECEPTOR LY49L1
Mus musculus
Lectin_C
Ly49
LEU A 113
LEU C 113
LEU C 114
LEU C 191
None
homomer
cyclic
19818651
3glv LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS PROTEIN
Thermoplasma volcanium
CTP_transf_likeLEU A  13
LEU A  58
LEU B  13
LEU B  58
None
homomer
cyclic
-
3ipi GERANYLTRANSTRANSFERASE
Methanosarcina mazei
polyprenyl_syntLEU A  93
LEU A  97
LEU B 115
LEU B 116
None
homomer
cyclic
-
3kt7 PKHD-TYPE HYDROXYLASE TPA1
Saccharomyces cerevisiae
2OG-FeII_Oxy_4
Ofd1_CTDD
LEU A 522
LEU A 523
LEU B 522
LEU B 523
None
homomer
cyclic
20040577
3lh2 4E10_1VI7A_S0_002_N (T88)
synthetic construct
DUF1949LEU S  60
LEU S  68
LEU S  70
LEU V  12
None
heteromer
cyclic
20826338
3m5b ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 32
Homo sapiens
BTBLEU A  17
LEU A  45
LEU B  17
LEU B  45
None
homomer
cyclic
20493880
3obk DELTA-AMINOLEVULINIC ACID DEHYDRATASE
Toxoplasma gondii
ALADLEU A 270
LEU A 273
LEU B 270
LEU B 273
None
homomer
dihedral
21383008
3oei RELJ (ANTITOXIN RV3357)
RELK (TOXIN RV3358)
Mycobacterium tuberculosis
PhdYeFM_antitox
YoeB_toxin
LEU A  52
LEU A  62
LEU C  49
LEU C  53
None
heteromer
cyclic
-
3s82 S-ADENOSYLMETHIONINE SYNTHASE
Mycobacterium avium
S-AdoMet_synt_C
S-AdoMet_synt_M
S-AdoMet_synt_N
LEU A  47
LEU A 262
LEU B  47
LEU B 262
None
homomer
cyclic
25613812
3tqt D-ALANINE--D-ALANINE LIGASE
Coxiella burnetii
Dala_Dala_lig_C
Dala_Dala_lig_N
LEU A 119
LEU A 122
LEU B 119
LEU B 122
None
homomer
cyclic
26033498
3tsi HEMAGGLUTININ-NEURAMINIDASE
Mammalian rubulavirus 5
-LEU A  87
LEU C  87
LEU C  90
LEU D  90
None
homomer
cyclic
21994464
3umc HALOACID DEHALOGENASE
Pseudomonas aeruginosa
HAD_2LEU A 143
LEU A 147
LEU A 164
LEU C 147
None
homomer
cyclic
-
4e45 CENTROMERE PROTEIN S
CENTROMERE PROTEIN X
FANCONI ANEMIA GROUP M PROTEIN
Homo sapiens
FANCM-MHF_bdLEU C  53
LEU D  74
LEU E 705
LEU E 731
None
heteromer
asymmetric
-
4huq ENERGY-COUPLING FACTOR TRANSPORTER ATP-BINDING PROTEIN ECFA 1
ENERGY-COUPLING FACTOR TRANSPORTER ATP-BINDING PROTEIN ECFA 2
Lactobacillus brevis
ABC_tranLEU A 274
LEU A 278
LEU B 247
LEU B 251
None
heteromer
asymmetric
23584589
4ic1 UNCHARACTERIZED PROTEIN
Saccharolobus solfataricus
-LEU F  57
LEU F  61
LEU G  57
LEU G  61
None
homomer
dihedral
24171432
4ifd EXOSOME COMPLEX COMPONENT RRP43
EXOSOME COMPLEX COMPONENT RRP46
Saccharomyces cerevisiae
RNase_PH
RNase_PH
RNase_PH_C
LEU C 360
LEU D 180
LEU D 191
LEU D 195
None
heteromer
asymmetric
23376952
4ipe TNF RECEPTOR-ASSOCIATED PROTEIN 1
Danio rerio
HATPase_c_3
HSP90
LEU A 120
LEU A 415
LEU B 120
LEU B 415
None
homomer
cyclic
24462206
4lrv DNA SULFUR MODIFICATION PROTEIN DNDE
Escherichia coli
DndELEU A  60
LEU A  62
LEU M  35
LEU M 106
None
homomer
dihedral
22525332
4m37 PROTEIN ARGININE N-METHYLTRANSFERASE 7
Trypanosoma brucei
PrmALEU A  64
LEU A 130
LEU A 133
LEU B 238
SAH A 401
homomer
cyclic
24726341
4nzp ARGININOSUCCINATE SYNTHASE
Campylobacter jejuni
Arginosuc_synthLEU A 309
LEU A 333
LEU D 309
LEU D 333
None
homomer
dihedral
-
4ub6 PHOTOSYSTEM II REACTION CENTER PROTEIN L
PHOTOSYSTEM II REACTION CENTER PROTEIN M
Thermosynechococcus vulcanus
PsbL
PsbM
LEU L  12
LEU L  17
LEU L  21
LEU M  22
LHG L 101
heteromer
asymmetric
25470056
4wnn HISTONE H2A.1
HISTONE H2B.1
Saccharomyces cerevisiae
Histone
Histone
Histone_H2A_C
LEU A  59
LEU A  97
LEU B 105
LEU B 109
None
heteromer
asymmetric
26455391
4xtr ATPASE GET3
PEP12P
Saccharomyces cerevisiae
ArsA_ATPaseLEU A 183
LEU A 187
LEU A 219
LEU G 271
None
heteromer
asymmetric
25745174
4ymr PROTEIN SNX21
Mus musculus
-LEU A 300
LEU A 303
LEU B 312
LEU B 316
None
homomer
cyclic
25882846
4zur ACETYLPOLYAMINE AMINOHYDROLASE
Mycoplana ramosa
Hist_deacetylLEU A  18
LEU A  23
LEU B  18
LEU B  23
None
homomer
cyclic
26200446
5d1r RV1816 TRANSCRIPTIONAL REGULATOR
Mycobacterium tuberculosis
TetR_NLEU A 191
LEU A 227
LEU B 191
LEU B 227
None
homomer
cyclic
26396194
5du1 MAMBALGIN-1
Dendroaspis polylepis
-LEU C  30
LEU C  32
LEU D  30
LEU D  32
None
homomer
dihedral
26680001
5dvw MINOR NUCLEOPROTEIN VP30
Zaire ebolavirus
Transcript_VP30LEU A 170
LEU A 173
LEU B 261
LEU B 264
None
homomer
cyclic
-
5fii PHENYLALANINE-4-HYDROXYLASE
Homo sapiens
ACTLEU A  48
LEU A  52
LEU C  48
LEU C  52
PHE A 901
PHE C 901
homomer
cyclic
27049649
5gi4 ATP-DEPENDENT RNA HELICASE DEAD
Escherichia coli
Helicase_CLEU A 407
LEU A 424
LEU A 428
LEU B 429
None
homomer
cyclic
29107486
5h3j GOLGI REASSEMBLY-STACKING PROTEIN 2
GOLGIN-45
Mus musculus
GRASP55_65LEU A  55
LEU A  59
LEU A  96
LEU B 403
None
heteromer
asymmetric
28049725
5hsi PUTATIVE DECARBOXYLASE
Lactobacillus brevis
Pyridoxal_deCLEU A  31
LEU A  35
LEU A 109
LEU B  75
None
homomer
cyclic
27292129
5jho ELECTRONEUTRAL SODIUM BICARBONATE EXCHANGER 1
Homo sapiens
Band_3_cytoLEU A 110
LEU B 110
LEU B 113
LEU B 337
None
homomer
cyclic
28935959
5lsw CELL DIFFERENTIATION PROTEIN RCD1 HOMOLOG
LD12033P
Drosophila melanogaster
Homo sapiens
Rcd1LEU A 137
LEU A 177
LEU B 801
LEU B 805
None
heteromer
cyclic
28165457
5t6j KINETOCHORE PROTEIN SPC24
KINETOCHORE PROTEIN SPC25
KINETOCHORE-ASSOCIATED PROTEIN DSN1
Saccharomyces cerevisiae
Spc24LEU A 164
LEU B 206
LEU C 563
LEU C 566
None
heteromer
asymmetric
27881300
5teo HIV-1 GAG CTD-SP1
Human immunodeficiency virus 1
Gag_p24LEU A 151
LEU A 189
LEU B 151
LEU B 189
None
homomer
cyclic
-
5tw1 DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA
RNA POLYMERASE SIGMA FACTOR SIGA
Mycolicibacterium smegmatis
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
Sigma70_r4
LEU C 811
LEU C 812
LEU F 398
LEU F 461
None
heteromer
asymmetric
28067618
5vk3 HISTONE-LYSINE N-METHYLTRANSFERASE EZH2,POLYCOMB PROTEIN SUZ12
POLYCOMB PROTEIN EED
Chaetomium thermophilum
SET
VEFS-Box
WD40
WD40
LEU A 254
LEU A 267
LEU A 315
LEU B 224
None
heteromer
asymmetric
28607149
5w8x LIPID-A-DISACCHARIDE SYNTHASE
Escherichia coli
LpxBLEU A 194
LEU A 196
LEU A 272
LEU B 341
None
homomer
cyclic
29371662
5xaq PROBABLE D-TYROSYL-TRNA(TYR) DEACYLASE 2
Mus musculus
Tyr_DeacylaseLEU A  13
LEU A 165
LEU B  13
LEU B 165
None
homomer
cyclic
29410408
5xog RNA POLYMERASE II SUBUNIT B12.5
RNA POLYMERASE II THIRD LARGEST SUBUNIT B44, PART OF CENTRAL CORE
Komagataella phaffii
RNA_pol_A_bac
RNA_pol_L_2
LEU C  28
LEU C  32
LEU C 251
LEU K  45
None
heteromer
asymmetric
28775211
5y7d PROTEIN CXORF40A
Homo sapiens
-LEU A 107
LEU A 116
LEU A 121
LEU B 159
None
homomer
cyclic
-
6d14 TNF RECEPTOR-ASSOCIATED PROTEIN 1
Danio rerio
HATPase_c_3
HSP90
LEU A 665
LEU A 683
LEU A 711
LEU B 712
None
homomer
cyclic
29991590
6gud SIDEROPHORE ESTERASE IROE-LIKE, PUTATIVE
Aspergillus fumigatus
EsteraseLEU A  10
LEU A  59
LEU B  10
LEU B  59
None
homomer
cyclic
30070018