PDBID Molecule/
Organism
Pfam Residues HETATM Symmetry Pubmed View
1fd3 BETA-DEFENSIN 2
Homo sapiens
Defensin_betaGLY A   1
ILE A   2
ILE C  27
GLY C  28
None
homomer
cyclic
10906336
1knx PROBABLE HPR(SER) KINASE/PHOSPHATASE
Mycoplasma pneumoniae
Hpr_kinase_C
Hpr_kinase_N
ILE A 158
GLY A 159
ILE A 267
GLY C 270
None
homomer
dihedral
12589763
1p9h INVASIN
Yersinia enterocolitica
YadA_head
YadA_stalk
ILE A  73
ILE B  75
GLY B  76
GLY B  90
None
homomer
cyclic
14765110
1re0 ADP-RIBOSYLATION FACTOR 1
ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR 1
Homo sapiens
Saccharomyces cerevisiae
Arf
Sec7
GLY A  50
GLY B 196
ILE B 201
ILE B 259
None
heteromer
asymmetric
14690595
1v1h FIBRITIN, FIBER PROTEIN
Escherichia virus T4,Human mastadenovirus C
-ILE B 391
GLY C 380
ILE C 391
GLY C 392
None
homomer
asymmetric
15313619
1w5f CELL DIVISION PROTEIN FTSZ
Thermotoga maritima
FtsZ_C
Tubulin
GLY A 203
GLY A 206
ILE B 240
ILE B 322
None
homomer
cyclic
15558053
2ako GLUTAMATE 5-KINASE
Campylobacter jejuni
AA_kinaseILE A  71
GLY B  91
GLY B  92
ILE B 122
None
homomer
cyclic
-
2dc1 L-ASPARTATE DEHYDROGENASE
Archaeoglobus fulgidus
DUF108
NAD_binding_3
GLY A 113
ILE A 202
GLY B1114
ILE B1202
None
homomer
cyclic
17651440
2dt4 HYPOTHETICAL PROTEIN PH0802
Pyrococcus horikoshii
DUF296GLY A  99
ILE B  51
ILE B  64
GLY B 103
None
homomer
cyclic
17295322
2f22 BH3987
Bacillus halodurans
DinBGLY A   5
ILE A 112
GLY B 109
ILE B 112
None
homomer
cyclic
-
2gnu REACTION CENTER PROTEIN L CHAIN
REACTION CENTER PROTEIN M CHAIN
Rhodobacter sphaeroides
Photo_RCILE L 224
GLY L 228
ILE L 229
GLY M  43
U10 L1306
heteromer
asymmetric
17005199
2jbh PHOSPHORIBOSYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1
Homo sapiens
PribosyltranGLY A  47
ILE A  48
GLY B  47
ILE B  48
None
homomer
dihedral
21054786
2jjx URIDYLATE KINASE
Bacillus anthracis
AA_kinaseGLY A  52
ILE A  55
GLY A  78
ILE D  81
None
homomer
dihedral
18625239
2ou5 PYRIDOXAMINE 5'-PHOSPHATE OXIDASE-RELATED, FMN-BINDING
Jannaschia sp. CCS1
Pyridox_oxase_2ILE A  36
GLY A  37
GLY A  40
ILE B  36
None
homomer
cyclic
-
2pm7 PROTEIN TRANSPORT PROTEIN SEC13
PROTEIN TRANSPORT PROTEIN SEC31
Saccharomyces cerevisiae
Sec16_C
WD40
WD40
ILE A 395
GLY A 399
GLY A 401
ILE B  12
None
heteromer
cyclic
17604721
2wd5 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 1A
STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Mus musculus
SMC_hingeILE A 557
ILE A 560
GLY B 665
GLY B 666
None
heteromer
asymmetric
21139566
2xvy CHELATASE, PUTATIVE
Desulfovibrio vulgaris
CbiKILE A 162
GLY A 166
ILE D 162
GLY D 166
None
homomer
dihedral
27486032
2z9v ASPARTATE AMINOTRANSFERASE
Mesorhizobium loti
Aminotran_5GLY A 379
GLY A 381
ILE A 382
ILE D 382
None
homomer
dihedral
17989071
3c75 METHYLAMINE DEHYDROGENASE HEAVY CHAIN
Paracoccus versutus
Me-amine-dh_HILE H  98
GLY H 117
GLY H 118
ILE J 142
None
heteromer
cyclic
18512962
3e86 POTASSIUM CHANNEL PROTEIN
Bacillus cereus
Ion_trans_2GLY A  87
ILE A  88
GLY A  89
ILE C  95
None
homomer
cyclic
19098917
3g7g UPF0311 PROTEIN CA_C3321
Clostridium acetobutylicum
DUF3237GLY A  58
GLY A  59
ILE A  60
ILE D  60
None
homomer
dihedral
-
3ht4 ALUMINUM RESISTANCE PROTEIN
Bacillus cereus
Met_gamma_lyaseILE A 232
ILE A 373
GLY A 375
GLY B  59
None
homomer
dihedral
-
3k9a HIV GLYCOPROTEIN GP41
Human immunodeficiency virus 1
GP41GLY A  40
ILE A  41
GLY A  45
ILE B  41
None
homomer
cyclic
20525690
3lw7 ADENYLATE KINASE RELATED PROTEIN (ADKA-LIKE)
Saccharolobus solfataricus
AAA_18GLY A 154
ILE A 157
GLY B 154
ILE B 157
None
homomer
cyclic
-
3obh UNCHARACTERIZED PROTEIN
Streptococcus pneumoniae
PC4GLY A  61
ILE A  62
GLY B  61
ILE B  62
PEG B   1
homomer
cyclic
-
3q6i 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
Mycobacterium tuberculosis
adh_short_C2GLY A 366
GLY A 369
ILE A 370
ILE B 136
None
homomer
cyclic
-
3zds HOMOGENTISATE 1,2-DIOXYGENASE
Pseudomonas putida
HgmAGLY A 282
ILE G 281
GLY G 282
ILE G 293
None
homomer
dihedral
23858455
4dgu PUTATIVE CELL ADHESION PROTEIN
Bacteroides thetaiotaomicron
-GLY A 256
GLY A 257
ILE B 223
ILE B 232
None
homomer
dihedral
-
4ewt PEPTIDASE, M20/M25/M40 FAMILY
Staphylococcus aureus
Peptidase_M20ILE A 209
ILE B 237
GLY B 238
GLY B 257
None
homomer
dihedral
23385746
4goj ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 3
PROTEIN UNC-119 HOMOLOG A
Homo sapiens
Mus musculus
Arf
GMP_PDE_delta
GLY A  50
GLY A  69
ILE A  74
ILE C 183
GNP A 201
heteromer
asymmetric
22960633
4h87 KANADAPTIN
Homo sapiens
FHAGLY A 260
ILE A 273
GLY B 260
ILE B 273
None
homomer
cyclic
-
4hrn DESIGNED ANKYRIN REPEAT PROTEIN H10-2-G
synthetic construct
Ank_2ILE A 121
GLY A 122
GLY A 124
ILE B 121
None
heteromer
cyclic
24095059
4hwg UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE
Rickettsia bellii
Epimerase_2GLY A  72
ILE A  75
ILE D  71
GLY D  72
None
homomer
dihedral
-
4i4k UNCHARACTERIZED PROTEIN SGCJ
Streptomyces globisporus
DUF4440GLY A  88
GLY A  90
ILE A  91
ILE B  91
None
homomer
cyclic
27406907
4k0j HEAVY METAL CATION TRICOMPONENT EFFLUX PUMP ZNEA(CZCA-LIKE)
Cupriavidus metallidurans
ACR_tranGLY A 214
GLY A 215
ILE B 733
ILE B 737
None
homomer
cyclic
24173033
4muo UNCHARACTERIZED PROTEIN YBIB
Escherichia coli
Glycos_trans_3NGLY A  44
ILE A  47
ILE B   7
GLY B  44
None
homomer
cyclic
26063803
4q4k NITRONATE MONOOXYGENASE
Pseudomonas aeruginosa
NMOGLY A 177
ILE A 178
GLY A 197
ILE B 178
None
homomer
cyclic
25002579
4twk POTASSIUM CHANNEL SUBFAMILY K MEMBER 2
Homo sapiens
Ion_trans_2ILE A 247
ILE A 252
GLY A 253
GLY B 144
  K B 403
homomer
cyclic
-
4uhv VGRG1, VALINE-GLYCINE REPEAT PROTEIN G1
Pseudomonas aeruginosa
-ILE A 524
GLY A 525
ILE C 532
GLY C 533
None
homomer
cyclic
26894532
4v0h METALLO-BETA-LACTAMASE DOMAIN-CONTAINING PROTEIN 1 1
Homo sapiens
-GLY C 118
ILE C 123
GLY A 118
ILE A 123
None
homomer
cyclic
30507380
4v1g F0F1 ATP SYNTHASE SUBUNIT C
Mycolicibacterium phlei
ATP-synt_CGLY A  12
ILE A  15
GLY A  16
ILE B  15
None
homomer
cyclic
26601184
4wjt UNCHARACTERIZED PROTEIN YUIC
Bacillus subtilis
3DGLY A 190
ILE A 192
ILE B 135
GLY B 136
None
homomer
cyclic
26163297
4x4w CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL
Homo sapiens
PolyA_pol
PolyA_pol_RNAbd
GLY A 364
ILE A 367
ILE A 378
GLY B  71
None
homomer
asymmetric
25640237
5b46 2-OXOACID--FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT
2-OXOACID--FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT
Sulfurisphaera tokodaii
PFOR_II
POR
PFO_beta_C
POR_N
TPP_enzyme_C
GLY A 246
GLY A 247
ILE A 429
ILE D 285
None
heteromer
cyclic
27619895
5jh9 VACUOLAR AMINOPEPTIDASE 1
Saccharomyces cerevisiae
Peptidase_M18GLY A 291
ILE A 292
ILE B 229
GLY B 230
None
homomer
tetrahedral
27320913
5nxf LONG-TAIL FIBER PROXIMAL SUBUNIT
Escherichia virus T4
-ILE A1107
GLY A1110
ILE B1113
GLY C1104
ACT A1305
homomer
asymmetric
28665339
5nxh LONG-TAIL FIBER PROXIMAL SUBUNIT
Escherichia virus T4
-GLY A1104
ILE B1107
GLY B1110
ILE C1113
None
homomer
asymmetric
28665339
5odq METHYL-VIOLOGEN REDUCING HYDROGENASE, SUBUNIT A
METHYL-VIOLOGEN REDUCING HYDROGENASE, SUBUNIT G
Methanothermococcus thermolithotrophicus
NiFeSe_Hases
NiFeSe_Hases
Oxidored_q6
GLY E  14
ILE E  17
GLY F  62
ILE F 162
SF4 E 301
heteromer
cyclic
28818947
5yfj RIBOSE 1,5-BISPHOSPHATE ISOMERASE
Pyrococcus horikoshii
IF-2BGLY A 121
ILE A 293
ILE A 298
GLY B 248
None
homomer
dihedral
29382938
6bkx ISOCITRATE DEHYDROGENASE [NADP] CYTOPLASMIC
Homo sapiens
-ILE C 154
GLY C 181
ILE A 154
GLY A 181
None
homomer
cyclic
30004704