PDBID Molecule/
Organism
Pfam Residues HETATM Symmetry Pubmed View
1a0s SUCROSE-SPECIFIC PORIN
Salmonella enterica
LamBGLY P  82
GLY Q 185
GLY Q 209
None
homomer
cyclic
9437428
1abi ALPHA-THROMBIN (LARGE SUBUNIT)
HIRULOG 3
Hirudo medicinalis
Homo sapiens
TrypsinGLY H 193
GLY I   5
GLY I   6
HMR I   3
heteromer
asymmetric
1445905
1ahs AFRICAN HORSE SICKNESS VIRUS (SEROTYPE 4) VP7
African horse sickness virus
Orbi_VP7GLY A 199
GLY B 199
GLY C 199
None
homomer
cyclic
8648715
1b7y PROTEIN (PHENYLALANYL-TRNA SYNTHETASE)
Thermus thermophilus
B3_4
B5
FDX-ACB
tRNA-synt_2d
tRNA-synt_2d
tRNA_bind
GLY A  98
GLY B 504
GLY B 506
None
heteromer
cyclic
10092459
1cn3 COAT PROTEIN VP1
FRAGMENT OF COAT PROTEIN VP2
Mus musculus polyomavirus 1
Polyomavirus sp.
Polyoma_coat
Polyoma_coat2
GLY E 241
GLY F   7
GLY F   8
None
heteromer
asymmetric
9628860
1dmh CATECHOL 1,2-DIOXYGENASE
Acinetobacter sp. ADP1
Dioxygenase_C
Dioxygenase_N
GLY A  25
GLY A  26
GLY B 216
None
homomer
cyclic
10801478
1dqu ISOCITRATE LYASE
Aspergillus nidulans
ICLGLY A 174
GLY A 175
GLY B 202
None
homomer
dihedral
10801489
1ept PORCINE E-TRYPSIN
Sus scrofa
TrypsinGLY A  43
GLY A  44
GLY C 196
None
heteromer
asymmetric
7947985
1gme HEAT SHOCK PROTEIN 16.9B
Triticum aestivum
HSP20GLY A  63
GLY A 128
GLY B 128
None
homomer
dihedral
11702068
1h6w BACTERIOPHAGE T4 SHORT TAIL FIBRE
Escherichia virus T4
Collar
gp12-short_mid
GLY A 311
GLY A 312
GLY E 317
None
homomer
cyclic
11743729
1hm9 UDP-N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE
Streptococcus pneumoniae
Hexapep
Hexapep_2
NTP_transferase
GLY A 440
GLY B 440
GLY C 440
None
homomer
cyclic
11118459
1hqs ISOCITRATE DEHYDROGENASE
Bacillus subtilis
Iso_dhGLY A  99
GLY B 222
GLY B 230
None
homomer
cyclic
11290745
1i2m GTP-BINDING NUCLEAR PROTEIN RAN
REGULATOR OF CHROMOSOME CONDENSATION 1
Homo sapiens
RCC1
RCC1
Ras
GLY A  19
GLY A  20
GLY B 151
SO4 A1250
heteromer
asymmetric
11336674
1icf PROTEIN (CATHEPSIN L: HEAVY CHAIN)
PROTEIN (INVARIANT CHAIN)
Homo sapiens
Peptidase_C1
Thyroglobulin_1
GLY A  23
GLY A  67
GLY I 210
None
heteromer
asymmetric
10022822
1jb0 PHOTOSYSTEM 1 REACTION CENTRE SUBUNIT IV
PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2
Synechococcus elongatus
PSI_PsaE
PsaA_PsaB
GLY B 569
GLY B 571
GLY E  47
None
heteromer
cyclic
11418848
1k28 TAIL-ASSOCIATED LYSOZYME
Escherichia virus T4
Gp5_C
Gp5_OB
Phage_lysozyme
GLY A 322
GLY A 459
GLY E 452
None
heteromer
cyclic
11823865
1k6y INTEGRASE
Human immunodeficiency virus 1
-GLY B 189
GLY B 190
GLY D 190
None
homomer
cyclic
11743009
1kvd SMK TOXIN
Millerozyma farinosa
-GLY A  74
GLY A  75
GLY B 155
None
heteromer
asymmetric
9016714
1me8 INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE
Tritrichomonas suis
CBS
IMPDH
GLY A 314
GLY A 315
GLY C 486
 NA A 901
CSO A 319
homomer
cyclic
12235158
1o54 SAM-DEPENDENT O-METHYLTRANSFERASE
Thermotoga maritima
GCD14GLY A  52
GLY B 193
GLY B 194
None
homomer
dihedral
-
1o97 ELECTRON TRANSFERRING FLAVOPROTEIN ALPHA-SUBUNIT
ELECTRON TRANSFERRING FLAVOPROTEIN BETA-SUBUNIT
Methylophilus methylotrophus
ETF
ETF
ETF_alpha
GLY C 166
GLY C 167
GLY D 254
FAD D1319
heteromer
asymmetric
12567183
1ocy BACTERIOPHAGE T4 SHORT TAIL FIBRE
Escherichia virus T4
Collar
S_tail_recep_bd
GLY A 397
GLY B 402
GLY B 431
None
homomer
cyclic
12888344
1onw ISOASPARTYL DIPEPTIDASE
Escherichia coli
Amidohydro_1GLY A  79
GLY E 192
GLY E 193
EDO E 804
homomer
dihedral
12718528
1ozh ACETOLACTATE SYNTHASE, CATABOLIC
Klebsiella pneumoniae
TPP_enzyme_C
TPP_enzyme_M
TPP_enzyme_N
GLY A 190
GLY D 190
GLY D 322
None
homomer
dihedral
14557277
1pyo CASPASE-2
Homo sapiens
Peptidase_C14GLY A  56
GLY A  57
GLY B 236
None
heteromer
cyclic
12920126
1qge PROTEIN (TRIACYLGLYCEROL HYDROLASE)
Burkholderia glumae
Abhydrolase_1GLY D 183
GLY D 193
GLY E 274
None
heteromer
asymmetric
-
1qps ENDONUCLEASE ECORI
Escherichia coli
EcoRIGLY A  78
GLY A  79
GLY B 210
None
homomer
cyclic
-
1r8o KUNITZ TRYPSIN INHIBITOR
Copaifera langsdorffii
Kunitz_legumeGLY A  75
GLY B 113
GLY B 114
None
heteromer
asymmetric
15134830
1rgx RESISTIN
Mus musculus
ResistinGLY A  63
GLY B  63
GLY C  63
None
homomer
cyclic
15155948
1s2d PURINE TRANS DEOXYRIBOSYLASE
Lactobacillus helveticus
Nuc_deoxyrib_trGLY A  60
GLY A  61
GLY E 165
None
homomer
dihedral
14992575
1s4d UROPORPHYRIN-III C-METHYLTRANSFERASE
Pseudomonas denitrificans (nomen rejiciendum)
TP_methylaseGLY A 172
GLY B 172
GLY B 176
None
homomer
cyclic
15522295
1sff 4-AMINOBUTYRATE AMINOTRANSFERASE
Escherichia coli
Aminotran_3GLY A  18
GLY A  20
GLY B 292
None
homomer
dihedral
15323550
1sgj CITRATE LYASE, BETA SUBUNIT
Deinococcus radiodurans
HpcH_HpaIGLY A 161
GLY A 162
GLY C 214
None
homomer
cyclic
-
1vf7 MULTIDRUG RESISTANCE PROTEIN MEXA
Pseudomonas aeruginosa
-GLY K 232
GLY K 234
GLY L 252
None
homomer
helical
15117957
1vq8 50S RIBOSOMAL PROTEIN L2P
50S RIBOSOMAL PROTEIN L37AE
Haloarcula marismortui
Ribosomal_L2
Ribosomal_L37ae
Ribosomal_L2_C
GLY A 161
GLY A 162
GLY Z  67
None
heteromer
asymmetric
16285925
1wdj HYPOTHETICAL PROTEIN TT1808
Thermus thermophilus
Uma2GLY A  42
GLY A  43
GLY B 105
None
homomer
asymmetric
-
1xx7 OXETANOCIN-LIKE PROTEIN
Pyrococcus furiosus
HD_3GLY A 139
GLY B 139
GLY C 139
None
homomer
dihedral
-
1y7r HYPOTHETICAL PROTEIN SA2161
Staphylococcus aureus
Acetyltransf_10GLY A  34
GLY B  60
GLY B  61
None
homomer
cyclic
-
1ya7 PROTEASOME BETA SUBUNIT
Thermoplasma acidophilum
ProteasomeGLY H  50
GLY I 117
GLY I 118
None
heteromer
dihedral
15916965
1yb0 PROPHAGE LAMBDABA02, N-ACETYLMURAMOYL-L-ALANINE AMIDASE, FAMILY 2
Bacillus anthracis
Amidase_2GLY A 134
GLY B 134
GLY C 134
None
homomer
cyclic
16103125
1yu0 MAJOR TROPISM DETERMINANT (MTD-P1)
Bordetella virus BPP1
Mtd_NGLY A 314
GLY B 314
GLY C 314
None
homomer
cyclic
16170324
1ze3 CHAPERONE PROTEIN FIMC
FIMH PROTEIN
Escherichia coli
Fimbrial
PapD_C
PapD_N
GLY C   5
GLY H 159
GLY H 160
EDO H2012
heteromer
asymmetric
15920478
1zs6 NUCLEOSIDE DIPHOSPHATE KINASE 3
Homo sapiens
NDKGLY A 119
GLY B 119
GLY F 119
None
homomer
dihedral
-
1zzg GLUCOSE-6-PHOSPHATE ISOMERASE
Thermus thermophilus
PGIGLY A 270
GLY A 280
GLY B 302
None
homomer
cyclic
-
2ahy POTASSIUM CHANNEL PROTEIN
Bacillus cereus
Ion_trans_2GLY A  67
GLY B  67
GLY C  67
 CA A 114
 CA C 114
homomer
cyclic
16467789
2b2h AMMONIUM TRANSPORTER
Archaeoglobus fulgidus
Ammonium_transpGLY A   4
GLY B   4
GLY C   4
None
homomer
cyclic
16214888
2b3z RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD
Bacillus subtilis
RibD_C
dCMP_cyt_deam_1
GLY A 318
GLY A 319
GLY B 330
None
homomer
dihedral
-
2bfd 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT
Homo sapiens
E1_dhGLY A 236
GLY C 245
GLY C 247
None
heteromer
cyclic
16472748
2bi0 HYPOTHETICAL PROTEIN RV0216
Mycobacterium tuberculosis
-GLY A  35
GLY B  35
GLY C  35
None
homomer
cyclic
15987908
2bwn 5-AMINOLEVULINATE SYNTHASE
Rhodobacter capsulatus
Aminotran_1_2GLY A  53
GLY B  81
GLY B  82
SIN A1398
homomer
cyclic
16121195
2c42 PYRUVATE-FERREDOXIN OXIDOREDUCTASE
Desulfovibrio africanus
EKR
Fer4_16
PFOR_II
POR
POR_N
TPP_enzyme_C
GLY A 429
GLY A 432
GLY B1209
None
homomer
cyclic
16472741
2c4w 3-DEHYDROQUINATE DEHYDRATASE
Helicobacter pylori
DHquinase_IIGLY A 123
GLY A 124
GLY B 128
GOL B1162
IMD B1164
homomer
cyclic
16480265
2dc1 L-ASPARTATE DEHYDROGENASE
Archaeoglobus fulgidus
DUF108
NAD_binding_3
GLY A 113
GLY A 114
GLY B1114
None
homomer
cyclic
17651440
2dt4 HYPOTHETICAL PROTEIN PH0802
Pyrococcus horikoshii
DUF296GLY A  95
GLY A  99
GLY B 103
None
homomer
cyclic
17295322
2dv6 NITRITE REDUCTASE
Hyphomicrobium denitrificans
Cu-oxidase_3GLY A 228
GLY A 231
GLY C 368
None
homomer
dihedral
17360521
2eis HYPOTHETICAL PROTEIN TTHB207
Thermus thermophilus
4HBTGLY A  13
GLY C  13
GLY E  13
None
homomer
dihedral
-
2epi UPF0045 PROTEIN MJ1052
Methanocaldococcus jannaschii
Thiamine_BPGLY A  17
GLY D  17
GLY D  19
None
homomer
dihedral
-
2f0c PHAGE TP901-1 ORF49 (BPP)
Lactococcus phage TP901-1
Caudo_bapla_RBPGLY A 127
GLY A 128
GLY C 146
None
homomer
cyclic
16549427
2fco RECOMBINATION PROTEIN U (PENICILLIN-BINDING PROTEIN RELATED FACTOR A)
Geobacillus kaustophilus
RecUGLY A  93
GLY B 129
GLY B 130
None
homomer
cyclic
17557334
2fgq OUTER MEMBRANE PORIN PROTEIN 32
Delftia acidovorans
Porin_4GLY X  70
GLY A  70
GLY B  70
 CA A 502
 CA B 502
 CA X 502
homomer
cyclic
16434398
2g40 CONSERVED HYPOTHETICAL PROTEIN
Deinococcus radiodurans
LUD_domGLY A 177
GLY B 185
GLY B 186
None
homomer
cyclic
-
2gnu REACTION CENTER PROTEIN L CHAIN
REACTION CENTER PROTEIN M CHAIN
Rhodobacter sphaeroides
Photo_RCGLY L 225
GLY L 228
GLY M  43
U10 L1306
heteromer
asymmetric
17005199
2i7n PANTOTHENATE KINASE 1
Homo sapiens
FumbleGLY A 441
GLY A 445
GLY B 498
None
homomer
cyclic
17631502
2is8 MOLYBDOPTERIN BIOSYNTHESIS ENZYME, MOAB
Thermus thermophilus
MoCF_biosynthGLY A 103
GLY B 103
GLY C 103
None
homomer
cyclic
-
2ivf ETHYLBENZENE DEHYDROGENASE ALPHA-SUBUNIT
ETHYLBENZENE DEHYDROGENASE BETA-SUBUNIT
Aromatoleum aromaticum
Fer4_11
Molybdopterin
Molydop_binding
GLY A 154
GLY A 156
GLY B 108
None
heteromer
asymmetric
16962969
2iz6 MOLYBDENUM COFACTOR CARRIER PROTEIN
Chlamydomonas reinhardtii
LDcluster4GLY A  89
GLY D  87
GLY D  89
None
homomer
dihedral
16873364
2j7q MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPECIFIC PROTEASE, M48USP
UBIQUITIN
Homo sapiens
Murid betaherpesvirus 1
Herpes_teg_N
ubiquitin
GLY A 111
GLY A 112
GLY B  47
None
heteromer
asymmetric
17349955
2jlp EXTRACELLULAR SUPEROXIDE DISMUTASE (CU-ZN)
Homo sapiens
Sod_CuGLY A 101
GLY A 157
GLY B 193
None
homomer
cyclic
19289127
2nr4 CONSERVED HYPOTHETICAL PROTEIN
Methanosarcina mazei
DUF447GLY A  28
GLY B 195
GLY B 196
None
homomer
cyclic
-
2ns9 HYPOTHETICAL PROTEIN APE2225
Aeropyrum pernix
COXGGLY A 130
GLY B 130
GLY B 131
None
homomer
cyclic
-
2nvu MALTOSE BINDING PROTEIN/NEDD8-ACTIVATING ENZYME E1 CATALYTIC SUBUNIT CHIMERA
NEDD8
Homo sapiens
E2_bind
SBP_bac_8
ThiF
ubiquitin
GLY B2181
GLY I  75
GLY I  76
ATP B 103
heteromer
asymmetric
17220875
2nyt PROBABLE C->U-EDITING ENZYME APOBEC-2
Homo sapiens
APOBEC_NGLY A  37
GLY B  35
GLY B  37
None
homomer
cyclic
17187054
2o0r RV0858C (N-SUCCINYLDIAMINOPIMELATE AMINOTRANSFERASE)
Mycobacterium tuberculosis
Aminotran_1_2GLY A 238
GLY B 265
GLY B 266
None
homomer
cyclic
17292400
2o6f 34 KDA MEMBRANE ANTIGEN
Treponema pallidum
Iron_transportGLY A  85
GLY B 120
GLY B 122
None
homomer
cyclic
17192261
2ogj DIHYDROOROTASE
Agrobacterium fabrum
Amidohydro_1GLY A  83
GLY A  84
GLY B 116
None
homomer
dihedral
-
2opl HYPOTHETICAL PROTEIN
Geobacter sulfurreducens
OsmCGLY A   9
GLY B  41
GLY B  42
None
homomer
cyclic
-
2oul CHAGASIN
FALCIPAIN 2
Plasmodium falciparum
Trypanosoma cruzi
Inhibitor_I42
Peptidase_C1
GLY A  23
GLY A  65
GLY B  66
None
heteromer
asymmetric
17502099
2ozn HYALURONONGLUCOSAMINIDASE
O-GLCNACASE NAGJ
Clostridium perfringens
Cohesin
FIVAR
Dockerin_1
GLY A 886
GLY A 890
GLY B1589
None
heteromer
asymmetric
18716000
2phk PHOSPHORYLASE KINASE
Oryctolagus cuniculus
PkinaseGLY A  55
GLY A  56
GLY C 225
None
homomer
cyclic
9362479
2php UNCHARACTERIZED PROTEIN MJ0236
Methanocaldococcus jannaschii
ThiP_synthGLY A 388
GLY A 389
GLY B 391
None
homomer
dihedral
-
2pt7 CAG-ALFA
Helicobacter pylori
T2SSEGLY A 178
GLY A 179
GLY F 264
None
heteromer
cyclic
17972918
2q8n GLUCOSE-6-PHOSPHATE ISOMERASE
Thermotoga maritima
PGIGLY A 284
GLY A 297
GLY B 319
None
homomer
dihedral
-
2qma DIAMINOBUTYRATE-PYRUVATE TRANSAMINASE AND L-2,4-DIAMINOBUTYRATE DECARBOXYLASE
Vibrio parahaemolyticus
Pyridoxal_deCGLY A 656
GLY B 684
GLY B 686
None
homomer
cyclic
-
2r85 PURP PROTEIN PF1517
Pyrococcus furiosus
DUF1246
DUF1297
GLY A 211
GLY B 211
GLY C 211
None
homomer
cyclic
18069798
2rij PUTATIVE 2,3,4,5-TETRAHYDROPYRIDINE-2-CARBOXYLATE N- SUCCINYLTRANSFERASE
Campylobacter jejuni
Hexapep_2
THDPS_M
THDPS_N
GLY A 368
GLY B 368
GLY C 368
None
homomer
dihedral
-
2v36 GAMMA-GLUTAMYLTRANSPEPTIDASE LARGE CHAIN
GAMMA-GLUTAMYLTRANSPEPTIDASE SMALL CHAIN
Bacillus subtilis
G_glu_transpeptGLY A  44
GLY A  47
GLY B 581
None
heteromer
asymmetric
-
2vji TAILSPIKE PROTEIN
Salmonella virus HK620
Phage_spike_2GLY A 187
GLY A 188
GLY B 196
None
homomer
cyclic
18547389
2wc0 INSULIN A CHAIN
INSULIN-DEGRADING ENZYME
Homo sapiens
Insulin
Peptidase_M16_C
Peptidase_M16
Peptidase_M16_C
Peptidase_M16_M
GLY A 339
GLY A 361
GLY C   1
None
heteromer
asymmetric
19321446
2we8 XANTHINE DEHYDROGENASE
Mycolicibacterium smegmatis
XdhC_C
XdhC_CoxI
GLY A 339
GLY A 340
GLY B 360
ACT A1369
homomer
cyclic
-
2wn3 DISCOIDIN-1 SUBUNIT A
Dictyostelium discoideum
F5_F8_type_C
H_lectin
GLY A  25
GLY B  25
GLY C  25
None
homomer
cyclic
20580724
2wnx GLYCOSIDE HYDROLASE, FAMILY 9
Hungateiclostridium thermocellum
CBM_3GLY A 108
GLY A 109
GLY B 112
None
homomer
cyclic
20057047
2wp4 MOLYBDOPTERIN-CONVERTING FACTOR SUBUNIT 2 1
Mycobacterium tuberculosis
MoaEGLY A  35
GLY A  36
GLY B  42
None
homomer
cyclic
-
2wqp POLYSIALIC ACID CAPSULE BIOSYNTHESIS PROTEIN SIAC
Neisseria meningitidis
NeuB
SAF
GLY A 196
GLY B 272
GLY B 273
None
homomer
cyclic
19719325
2x0x RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA
Escherichia coli
ATP-cone
Ribonuc_red_lgC
Ribonuc_red_lgN
GLY A 295
GLY A 296
GLY G 327
None
homomer
dihedral
20518462
2x3h K5 LYASE
Escherichia virus K1-5
-GLY A 423
GLY C 432
GLY C 433
 BR A1505
homomer
cyclic
20519506
2x5d PROBABLE AMINOTRANSFERASE
Pseudomonas aeruginosa
-GLY B 122
GLY B 143
GLY D 122
None
homomer
dihedral
20419351
2xgf LONG TAIL FIBER PROTEIN P37
Escherichia virus T4
Collar
Phage_fiber
GLY A 913
GLY A 914
GLY C 978
None
homomer
cyclic
21041684
2y5t C1
CIIC1 FAB FRAGMENT HEAVY CHAIN
Mus musculus
C1-set
V-set
GLY A 102
GLY E  16
GLY G  16
None
heteromer
asymmetric
22127694
2y7e 3-KETO-5-AMINOHEXANOATE CLEAVAGE ENZYME
Candidatus Cloacimonas acidaminovorans
BKACEGLY A 148
GLY C 177
GLY C 178
None
homomer
dihedral
21632536
2ynm LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B
Prochlorococcus marinus
Oxidored_nitro
PCP_red
GLY B 123
GLY D  66
GLY D  67
None
heteromer
cyclic
23341615
2yny GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN
Saccharomyces cerevisiae,Salmonella enterica
-GLY A 266
GLY A 267
GLY B 293
None
homomer
cyclic
23213248
2yzk OROTATE PHOSPHORIBOSYLTRANSFERASE
Aeropyrum pernix
PribosyltranGLY A  36
GLY B  85
GLY B 102
None
homomer
cyclic
-
2z1u HYDROGENASE EXPRESSION/FORMATION PROTEIN HYPE
Desulfovibrio vulgaris
AIRS
AIRS_C
GLY A  13
GLY A  14
GLY B 222
None
homomer
cyclic
17706667
2zbt PYRIDOXAL BIOSYNTHESIS LYASE PDXS
Thermus thermophilus
SOR_SNZGLY A   3
GLY A   4
GLY B  15
None
homomer
dihedral
-
2zog CYTOSOLIC NON-SPECIFIC DIPEPTIDASE
Mus musculus
Peptidase_M20GLY A 230
GLY B 415
GLY B 416
BES B1081
homomer
cyclic
18550540
2zon DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE
Achromobacter xylosoxidans
Cu-oxidase
Cu-oxidase_3
GLY A  98
GLY A 101
GLY B 252
None
heteromer
asymmetric
19890332
2zoo PROBABLE NITRITE REDUCTASE
Pseudoalteromonas haloplanktis
Cu-oxidase
Cu-oxidase_3
Cytochrom_C
GLY A  93
GLY A  96
GLY C 233
None
homomer
cyclic
-
2zuv LACTO-N-BIOSE PHOSPHORYLASE
Bifidobacterium longum
LBP_C
LBP_M
Lact_bio_phlase
GLY A 264
GLY A 265
GLY B 554
None
homomer
cyclic
19124470
3a12 RIBULOSE BISPHOSPHATE CARBOXYLASE
Thermococcus kodakarensis
-GLY D 260
GLY I 260
GLY I 262
None
homomer
dihedral
20926376
3a1m CHIMERA OF THROMBIN CLEAVAGE SITE, TAIL-ASSOCIATED LYSOZYME, FIBRITIN
Escherichia virus T4
Fibritin_C
Gp5_C
GLY A  66
GLY B  73
GLY B  74
None
homomer
dihedral
20661999
3a1p 30S RIBOSOMAL PROTEIN S19
RIBOSOME MATURATION FACTOR RIMM
Thermus thermophilus
PRC
Ribosomal_S19
RimM
GLY A   7
GLY A  23
GLY B  84
None
heteromer
asymmetric
-
3amj ZINC PEPTIDASE ACTIVE SUBUNIT
ZINC PEPTIDASE INACTIVE SUBUNIT
Sphingomonas sp. A1
Peptidase_M16
Peptidase_M16_C
GLY B 370
GLY A 103
GLY A 104
None
homomer
cyclic
21262231
3aqj BASEPLATE ASSEMBLY PROTEIN V
Escherichia virus P2
Phage_base_VGLY A 101
GLY B 107
GLY B 108
None
homomer
cyclic
21821878
3b77 UNCHARACTERIZED PROTEIN
Exiguobacterium sibiricum
YvbH_ext
bPH_1
GLY A 158
GLY A 159
GLY B 159
None
homomer
cyclic
19913036
3bc8 O-PHOSPHOSERYL-TRNA(SEC) SELENIUM TRANSFERASE
Mus musculus
SepSecSGLY A  71
GLY A  73
GLY C 402
None
homomer
dihedral
18093968
3bex TYPE III PANTOTHENATE KINASE
Thermotoga maritima
Pan_kinaseGLY A 142
GLY A 143
GLY B 176
None
homomer
cyclic
18186650
3c85 PUTATIVE GLUTATHIONE-REGULATED POTASSIUM-EFFLUX SYSTEM PROTEIN KEFB
Vibrio parahaemolyticus
TrkA_NGLY A  47
GLY A  49
GLY C 160
None
homomer
cyclic
-
3can PYRUVATE-FORMATE LYASE-ACTIVATING ENZYME
Bacteroides vulgatus
Radical_SAMGLY A   7
GLY A   8
GLY B  14
None
homomer
cyclic
-
3ce6 ADENOSYLHOMOCYSTEINASE
Mycobacterium tuberculosis
AdoHcyaseGLY A 275
GLY A 298
GLY D 318
None
homomer
dihedral
18815415
3d9x ADHESIN A
Bartonella henselae
YadA_stalkGLY A 385
GLY A 386
GLY C 402
None
homomer
cyclic
18688279
3df0 CALPAIN-2 CATALYTIC SUBUNIT
CALPASTATIN
Rattus norvegicus
Calpain_III
Calpain_inhib
Peptidase_C2
EF-hand_8
GLY A 103
GLY A 197
GLY C 176
None
heteromer
asymmetric
19020622
3dmb PUTATIVE GENERAL STRESS PROTEIN 26 WITH A PNP-OXIDASE LIKE FOLD
Xanthomonas campestris
Pyrid_ox_likeGLY A 145
GLY E  45
GLY E  46
None
homomer
dihedral
-
3enn GLUCOSE/RIBITOL DEHYDROGENASE
Brucella melitensis
adh_short_C2GLY A 142
GLY A 145
GLY C 161
None
homomer
dihedral
-
3f08 UNCHARACTERIZED PROTEIN Q6HG14
Bacillus thuringiensis
Polyketide_cyc2GLY A  23
GLY B  42
GLY B  43
None
homomer
cyclic
-
3f75 CATHEPSIN L PROPEPTIDE
CATHEPSIN L PROTEASE
Toxoplasma gondii
Inhibitor_I29
Peptidase_C1
GLY A  29
GLY A  73
GLY P 179
None
heteromer
asymmetric
19596863
3ff1 GLUCOSE-6-PHOSPHATE ISOMERASE
Staphylococcus aureus
PGIGLY A 288
GLY A 293
GLY B 315
None
homomer
cyclic
-
3fhk UPF0403 PROTEIN YPHP
Bacillus subtilis
Disulph_isomerGLY A  54
GLY A  58
GLY E  24
None
homomer
cyclic
19653655
3flh UNCHARACTERIZED PROTEIN LP_1913
Lactobacillus plantarum
RhodaneseGLY A  81
GLY A  82
GLY B  82
None
homomer
cyclic
-
3fsy TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE
Mycobacterium tuberculosis
Hexapep_2
THDPS_M
GLY A 296
GLY B 296
GLY C 296
None
homomer
cyclic
19394346
3g40 NA-K-CL COTRANSPORTER
Methanosarcina acetivorans
-GLY A 508
GLY B 624
GLY B 626
None
homomer
cyclic
19368887
3g6e 50S RIBOSOMAL PROTEIN L2P
50S RIBOSOMAL PROTEIN L37AE
Haloarcula marismortui
Ribosomal_L2
Ribosomal_L2_C
Ribosomal_L37ae
GLY A 161
GLY A 162
GLY Z  91
None
heteromer
asymmetric
19362093
3g7q VALINE-PYRUVATE AMINOTRANSFERASE
Salmonella enterica
Aminotran_1_2GLY A 254
GLY B 282
GLY B 283
None
homomer
cyclic
-
3gw6 ENDO-N-ACETYLNEURAMINIDASE
Enterobacteria phage K1F
End_tail_spike
Peptidase_S74
GLY A 825
GLY B 842
GLY B 843
None
homomer
cyclic
20118935
3gzn NEDD8
NEDD8-ACTIVATING ENZYME E1 CATALYTIC SUBUNIT
Homo sapiens
E2_bind
ubiquitin
ThiF
GLY B 202
GLY I  75
GLY I  76
B39 I 464
heteromer
asymmetric
20129059
3h0w S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME
Homo sapiens
SAM_decarboxGLY B  28
GLY B  30
GLY A 103
None
heteromer
asymmetric
19527050
3h6j NEURAMINIDASE
Pseudomonas aeruginosa
BNR_2GLY A 248
GLY B 331
GLY B 332
None
homomer
cyclic
19284989
3h8t HMUY
Porphyromonas gingivalis
HmuYGLY A 130
GLY A 133
GLY C 170
HEM C 301
homomer
dihedral
19424422
3hdc THIOREDOXIN FAMILY PROTEIN
Geobacter metallireducens
AhpC-TSAGLY A  24
GLY B 152
GLY B 153
None
homomer
cyclic
-
3hn6 GLUCOSAMINE-6-PHOSPHATE DEAMINASE
Borreliella burgdorferi
Glucosamine_isoGLY A 219
GLY C 219
GLY E 219
None
homomer
dihedral
-
3hrz COBRA VENOM FACTOR
COMPLEMENT FACTOR B
Homo sapiens
Naja kaouthia
A2M_recep
Sushi
NTR
Sushi
Trypsin
VWA
GLY C1529
GLY D 370
GLY D 371
None
heteromer
asymmetric
19574954
3hsh COLLAGEN ALPHA-1(XVIII) CHAIN
Homo sapiens
EndostatinGLY A   2
GLY B   2
GLY C   2
None
homomer
cyclic
19631658
3hwu PUTATIVE DNA-BINDING PROTEIN
Cupriavidus pinatubonensis
DUF296GLY A 129
GLY B 129
GLY C 129
None
homomer
cyclic
-
3hx9 PROTEIN RV3592
Mycobacterium tuberculosis
ABMGLY A  99
GLY A 100
GLY B  38
None
homomer
cyclic
19917297
3io1 AMINOBENZOYL-GLUTAMATE UTILIZATION PROTEIN
Klebsiella pneumoniae
Peptidase_M20GLY A 279
GLY B 284
GLY B 286
None
homomer
dihedral
-
3k1j ATP-DEPENDENT PROTEASE LON
Thermococcus onnurineus
AAA_32
Lon_C
Mg_chelatase
GLY A 314
GLY B 382
GLY B 383
None
homomer
cyclic
20834233
3k2n SIGMA-54-DEPENDENT TRANSCRIPTIONAL REGULATOR
Chlorobaculum tepidum
GAF_2GLY A  13
GLY B 125
GLY B 126
None
homomer
cyclic
-
3k6m SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE 1, MITOCHONDRIAL
Sus scrofa
CoA_transGLY A 110
GLY A 112
GLY B 352
None
homomer
cyclic
20606260
3k8t RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN 1
Saccharomyces cerevisiae
Ribonuc_red_lgC
Ribonuc_red_lgN
GLY A 267
GLY B 289
GLY B 290
DGT A 890
homomer
cyclic
19681093
3lsj DEST
Pseudomonas aeruginosa
TetR_NGLY A  27
GLY B 116
GLY B 117
None
homomer
cyclic
20639888
3lyc PUTATIVE PECTINASE
Parabacteroides distasonis
DUF2807GLY A 120
GLY A 141
GLY B 239
None
homomer
cyclic
-
3mkh NITROALKANE OXIDASE
Podospora anserina
Acyl-CoA_dh_1
Acyl-CoA_dh_N
GLY A 138
GLY A 139
GLY B 302
FAD A 500
homomer
dihedral
20481475
3n5f N-CARBAMOYL-L-AMINO ACID HYDROLASE
Geobacillus stearothermophilus
Peptidase_M20GLY A 263
GLY B 270
GLY B 271
None
homomer
cyclic
22904279
3nct PROTEIN PSIB
Escherichia coli
PsiBGLY A  53
GLY C  95
GLY C  96
None
homomer
cyclic
20659894
3nhe UBIQUITIN
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2
Homo sapiens
UCH
ubiquitin
GLY A 555
GLY A 556
GLY B  75
None
heteromer
asymmetric
-
3ntn USPA1
Moraxella catarrhalis
YadA_head
YadA_stalk
GLY A 196
GLY A 210
GLY C 205
None
homomer
cyclic
21876142
3ond ADENOSYLHOMOCYSTEINASE
Lupinus luteus
AdoHcyaseGLY A 262
GLY A 285
GLY D 305
None
homomer
dihedral
22349223
3ow2 -
-
-GLY A 160
GLY A 161
GLY Y  66
None
heteromer
asymmetric
3pfe SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE
Legionella pneumophila
Peptidase_M20GLY A 225
GLY B 411
GLY B 412
 CL B 505
GOL B 518
homomer
cyclic
-
3pk0 SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR
Mycolicibacterium smegmatis
adh_short_C2GLY A 146
GLY A 158
GLY C 166
None
homomer
dihedral
25613812
3pnr FALCIPAIN 2
PBICP-C
Plasmodium berghei
Plasmodium falciparum
Inhibitor_I71
Peptidase_C1
GLY A  40
GLY A  82
GLY B 311
None
heteromer
asymmetric
21742259
3po1 THROMBIN HEAVY CHAIN
Homo sapiens
TrypsinGLY B  65
GLY C 236
GLY C 237
None
heteromer
asymmetric
22726924
3pp4 GA101 FAB HEAVY CHAIN
GA101 FAB LIGHT CHAIN
Mus musculus
C1-set
V-set
GLY H  44
GLY L 105
GLY L 106
None
heteromer
asymmetric
21444918
3pqi GENE PRODUCT 138
unidentified phage
Gp138_NGLY A 181
GLY A 182
GLY C 190
None
homomer
cyclic
22325780
3q6i 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
Mycobacterium tuberculosis
adh_short_C2GLY A 143
GLY B 350
GLY B 353
None
homomer
cyclic
-
3qbr BCL-2 HOMOLOGOUS ANTAGONIST/KILLER
SJCHGC06286 PROTEIN
Homo sapiens
Schistosoma japonicum
Bcl-2GLY A 102
GLY B   6
GLY B   9
None
heteromer
asymmetric
21444803
3qgz HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1
Oryctolagus cuniculus
HITGLY A  93
GLY B 101
GLY B 104
None
homomer
cyclic
21697598
3qr7 BASEPLATE ASSEMBLY PROTEIN V
Escherichia virus P2
Phage_spikeGLY A 178
GLY C 184
GLY C 185
None
homomer
cyclic
22325780
3r5d TETRAHYDRODIPICOLINATE N-SUCCINYLETRANSFERASE
Pseudomonas aeruginosa
Hexapep_2
THDPS_M
THDPS_N
GLY A 323
GLY B 323
GLY C 323
None
homomer
cyclic
22359568
3rmu METHYLMALONYL-COA EPIMERASE, MITOCHONDRIAL
Homo sapiens
Glyoxalase_4GLY A 118
GLY A 119
GLY B 168
EDO B  10
homomer
cyclic
-
3rrl SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE SUBUNIT A
SUCCINYL-COA:3-KETOACID-COENZYME A TRANSFERASE SUBUNIT B
Helicobacter pylori
CoA_transGLY A 111
GLY A 113
GLY D  90
None
heteromer
cyclic
-
3ru4 CHYMOTRYPSINOGEN A
Bos taurus
TrypsinGLY D  43
GLY C 196
GLY C 197
None
heteromer
asymmetric
-
3so5 LEUCINE-RICH REPEATS AND IMMUNOGLOBULIN-LIKE DOMAINS PROTEIN 3
Mus musculus
Ig_3GLY A 557
GLY B 556
GLY B 557
None
homomer
cyclic
-
3std PROTEIN (SCYTALONE DEHYDRATASE)
Pyricularia grisea
Scytalone_dhGLY A  88
GLY B  88
GLY C  88
None
homomer
cyclic
9922139
3t6e PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT
REACTION CENTER PROTEIN M CHAIN
Blastochloris viridis
CytoC_RC
Photo_RC
GLY C 217
GLY M 101
GLY M 167
GOL C 354
heteromer
asymmetric
22054235
3tk8 2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-SUCCINYLTRANSFERASE
Burkholderia pseudomallei
Hexapep
Hexapep_2
THDPS_N_2
GLY A 116
GLY B 116
GLY C 116
None
homomer
cyclic
-
3tqf HPR(SER) KINASE
Coxiella burnetii
Hpr_kinase_CGLY A 149
GLY B 149
GLY C 149
None
homomer
cyclic
26033498
3u0b OXIDOREDUCTASE, SHORT CHAIN DEHYDROGENASE/REDUCTASE FAMILY PROTEIN
Mycolicibacterium smegmatis
adh_short_C2GLY A 139
GLY B 346
GLY B 349
None
homomer
cyclic
25613812
3u35 GENERAL STRESS PROTEIN
Xanthomonas citri
Pyrid_ox_likeGLY A 165
GLY D  65
GLY D  66
None
homomer
dihedral
22751670
3u88 HISTONE-LYSINE N-METHYLTRANSFERASE 2A
MENIN
Homo sapiens
MeninGLY A 326
GLY M  14
GLY M  23
SO4 M   2
heteromer
asymmetric
22327296
3uuw PUTATIVE OXIDOREDUCTASE WITH NAD(P)-BINDING ROSSMANN-FOLD DOMAIN
Clostridioides difficile
GFO_IDH_MocAGLY A 218
GLY B 246
GLY B 247
None
homomer
dihedral
-
3vp6 GLUTAMATE DECARBOXYLASE 1
Homo sapiens
Pyridoxal_deCGLY A 275
GLY B 302
GLY B 304
None
homomer
cyclic
23126365
3vr4 V-TYPE SODIUM ATPASE CATALYTIC SUBUNIT A
V-TYPE SODIUM ATPASE SUBUNIT B
Enterococcus hirae
ATP-synt_ab
ATP-synt_ab
ATP-synt_ab_Xtn
ATP-synt_ab_N
GLY A 343
GLY D 269
GLY D 275
None
heteromer
asymmetric
23334411
3wit PUTATIVE VGR PROTEIN
Escherichia coli
-GLY A 622
GLY C 627
GLY C 628
None
homomer
cyclic
24307403
3x1l CMR4
Archaeoglobus fulgidus
RAMPsGLY C 337
GLY D  47
GLY D 126
None
heteromer
asymmetric
25921071
3x2r CSGG
Escherichia coli
CsgGGLY A 152
GLY A 153
GLY B 220
None
homomer
cyclic
25453093
3ziy COPPER-CONTAINING NITRITE REDUCTASE
Ralstonia pickettii
Cu-oxidase_3
Cytochrome_CBB3
GLY A 103
GLY A 106
GLY C 243
None
homomer
cyclic
23535590
3zj5 CATALASE-3
Neurospora crassa
Catalase
Catalase-rel
GLY A  60
GLY A  61
GLY C 168
None
homomer
dihedral
23832201
3zqo TERMINASE SMALL SUBUNIT
Bacillus phage SF6
Terminase_2GLY A  94
GLY A  96
GLY B  96
None
homomer
cyclic
22207627
3zsc PECTATE TRISACCHARIDE-LYASE
Thermotoga maritima
Pec_lyase_CGLY A 223
GLY B 248
GLY B 250
None
homomer
cyclic
-
4aue CATALASE-PHENOL OXIDASE
Mycothermus thermophilus
Catalase
Catalase-rel
GLY A  40
GLY A  41
GLY D 148
None
homomer
dihedral
23519415
4bem F1FO ATPASE C1 SUBUNIT
F1FO ATPASE C2 SUBUNIT
Acetobacterium woodii
ATP-synt_C
ATP-synt_C
ATP-synt_C
GLY A  24
GLY A  26
GLY J 124
None
heteromer
asymmetric
25381992
4c7r GLYCINE BETAINE TRANSPORTER BETP
Corynebacterium glutamicum
BCCTGLY A 335
GLY A 338
GLY B 349
None
homomer
cyclic
24141878
4cad ANTIBODY FAB FRAGMENT HEAVY CHAIN
RAS AND A-FACTOR CONVERTING ENZYME 1, RCE1
Methanococcus maripaludis
Mus musculus
Abi
C1-set
V-set
GLY B 106
GLY C 118
GLY C 119
None
heteromer
asymmetric
24291792
4cof GAMMA-AMINOBUTYRIC ACID RECEPTOR SUBUNIT BETA-3
Homo sapiens
Neur_chan_LBD
Neur_chan_memb
GLY A   7
GLY B  32
GLY B  33
None
homomer
cyclic
24909990
4cqm ESTRADIOL 17-BETA-DEHYDROGENASE 8
Homo sapiens
-GLY I 159
GLY I 162
GLY L 178
GOL I 401
heteromer
cyclic
25203508
4cvn 30S RIBOSOMAL PROTEIN S11
PUTATIVE ADENYLATE KINASE
Pyrococcus abyssi
-GLY D 178
GLY D 179
GLY F  35
None
heteromer
asymmetric
24823650
4dqn PUTATIVE BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE ILVE
Streptococcus mutans
Aminotran_4GLY A  53
GLY B 186
GLY B 187
None
homomer
cyclic
22868765
4dx5 ACRIFLAVINE RESISTANCE PROTEIN B
Escherichia coli
ACR_tranGLY A  51
GLY A 755
GLY C 217
GOL A1110
heteromer
asymmetric
22451937
4dxt SUN DOMAIN-CONTAINING PROTEIN 2
Homo sapiens
Sad1_UNCGLY A 522
GLY B 522
GLY C 522
None
homomer
cyclic
22632968
4e3e MAOC DOMAIN PROTEIN DEHYDRATASE
Chloroflexus aurantiacus
MaoC_dehydratasGLY A  32
GLY B  32
GLY C  32
None
homomer
cyclic
-
4egu HISTIDINE TRIAD (HIT) PROTEIN
Clostridioides difficile
HITGLY A  83
GLY B  91
GLY B  94
None
homomer
cyclic
-
4fay MICROCOMPARTMENTS PROTEIN
Lactobacillus reuteri
BMCGLY A  86
GLY B  86
GLY C  86
GOL A 306
homomer
cyclic
23151629
4ffb PROTEIN STU2
TUBULIN ALPHA-1 CHAIN
Saccharomyces cerevisiae
Tubulin
Tubulin_C
GLY A 411
GLY A 413
GLY C 195
None
heteromer
asymmetric
22904013
4fp9 METHYLTRANSFERASE NSUN4
Homo sapiens
Methyltr_RsmB-FGLY A 148
GLY A 151
GLY D  57
None
heteromer
asymmetric
22949673
4g1p CYS-GLY METALLODIPEPTIDASE DUG1
Saccharomyces cerevisiae
Peptidase_M20GLY A 235
GLY B 420
GLY B 421
None
homomer
cyclic
-
4gif POLYCYSTIC KIDNEY DISEASE 2-LIKE 1 PROTEIN
Homo sapiens
Fer4_24GLY A 699
GLY A 700
GLY B 704
None
homomer
cyclic
23212381
4gsx ENVELOPE PROTEIN E
Dengue virus
Flavi_glycop_C
Flavi_glycoprot
GLY A  14
GLY B  14
GLY C  14
None
homomer
cyclic
23236058
4i3s HEAVY CHAIN OF VRC-PG04 FAB
OUTER DOMAIN OF HIV-1 GP120 (KER2018 OD4.2.2)
Homo sapiens
Human immunodeficiency virus
C1-set
GP120
V-set
GP120
GLY G 458
GLY G 459
GLY H  59
None
heteromer
asymmetric
23236069
4i42 1,4-DIHYDROXY-2-NAPHTHOYL-COA SYNTHASE
Escherichia coli
ECH_1GLY A 160
GLY F 263
GLY F 266
None
homomer
dihedral
23658663
4i4z NAPHTHOATE SYNTHASE
Synechocystis sp. PCC 6803
ECH_1GLY A 150
GLY F 253
GLY F 256
None
homomer
dihedral
23658663
4ii2 UBIQUITIN-60S RIBOSOMAL PROTEIN L40
UBIQUITIN-ACTIVATING ENZYME E1 1
Schizosaccharomyces pombe
E1_UFD
ThiF
ThiF
ubiquitin
GLY A 560
GLY B  75
GLY B  76
ATP A1103
heteromer
asymmetric
23416107
4jiv TAIL-ASSOCIATED LYSOZYME
Escherichia virus T4
Gp5_CGLY A 540
GLY B 547
GLY B 548
None
heteromer
asymmetric
23925114
4k0j HEAVY METAL CATION TRICOMPONENT EFFLUX PUMP ZNEA(CZCA-LIKE)
Cupriavidus metallidurans
ACR_tranGLY A  55
GLY C 214
GLY C 215
None
homomer
cyclic
24173033
4kht 8066 HEAVY CHAIN
8066 LIGHT CHAIN
Homo sapiens
C1-set
V-set
GLY H  44
GLY L 101
GLY L 102
None
heteromer
asymmetric
24244293
4kqw KETOL-ACID REDUCTOISOMERASE
Slackia exigua
IlvC
IlvN
GLY A 211
GLY A 212
GLY B 273
None
homomer
cyclic
23776225
4kt0 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1
PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2
Synechocystis sp. PCC 6803
PsaA_PsaBGLY A 465
GLY B  97
GLY B  99
None
heteromer
asymmetric
24473073
4lbh 5-CHLORO-2-HYDROXYHYDROQUINONE DEHYDROCHLORINASE (TFTG)
Burkholderia cepacia
YCIIGLY A  38
GLY A  39
GLY B  94
PEG A 201
homomer
dihedral
23955343
4lij FAR UPSTREAM ELEMENT-BINDING PROTEIN 1
Homo sapiens
KH_1GLY A 112
GLY A 116
GLY B 118
None
homomer
asymmetric
-
4lw4 CYSTEINE SULFINATE DESULFINASE
Escherichia coli
Aminotran_5GLY A  48
GLY B  20
GLY B 349
None
heteromer
cyclic
23913692
4m38 HISTONE H4
PROTEIN ARGININE N-METHYLTRANSFERASE 7
Homo sapiens
Trypanosoma brucei
PrmAGLY A 175
GLY A 180
GLY E   5
None
homomer
cyclic
24726341
4mt4 CMEC
Campylobacter jejuni
OEPGLY A  91
GLY C 327
GLY C 328
C8E A1009
homomer
cyclic
24753291
4n9o MAJOR PRION PROTEIN
NANOBODY NB484
Homo sapiens
Lama glama
Prion
V-set
GLY A 123
GLY A 124
GLY B 101
None
heteromer
asymmetric
24400836
4njx HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 2, MITOCHONDRIAL
Homo sapiens
HITGLY A 130
GLY C 138
GLY C 141
None
homomer
cyclic
-
4noo PUTATIVE UNCHARACTERIZED PROTEIN
VGRG PROTEIN
Vibrio cholerae
-GLY A 944
GLY B  89
GLY B  90
None
heteromer
asymmetric
24699653
4ob0 COBALT-CONTAINING NITRILE HYDRATASE SUBUNIT ALPHA
COBALT-CONTAINING NITRILE HYDRATASE SUBUNIT BETA
Pseudonocardia thermophila
NHase_alpha
NHase_beta
GLY A  87
GLY B 125
GLY B 126
None
heteromer
asymmetric
24383915
4oc8 RESTRICTION ENDONUCLEASE ASPBHI
Azoarcus sp. BH72
Mrr_catGLY A 208
GLY A 209
GLY B 383
None
homomer
cyclic
24604015
4oje EFF-1A
Caenorhabditis elegans
EFF-AFFGLY H 259
GLY A 259
GLY B 259
None
homomer
cyclic
24725407
4pch VP1
Human polyomavirus 7
Polyoma_coatGLY A 127
GLY B 207
GLY B 208
None
homomer
cyclic
25008942
4pd6 NUPC FAMILY PROTEIN
Vibrio cholerae
Gate
Nucleos_tra2_C
Nucleos_tra2_N
GLY A  70
GLY A  73
GLY B 272
None
homomer
cyclic
25082345
4pj2 LYSOZYME
PUTATIVE EXPORTED PROTEIN
Aeromonas hydrophila
Meretrix lusoria
PliIGLY A 103
GLY A 105
GLY D  95
None
heteromer
asymmetric
25664745
4pv2 L-ASPARAGINASE ALPHA SUBUNIT
L-ASPARAGINASE BETA SUBUNIT
Phaseolus vulgaris
Asparaginase_2GLY A   2
GLY A   3
GLY B 298
None
heteromer
cyclic
25004963
4q1k POLYKETIDE BIOSYNTHESIS ENOYL-COA ISOMERASE PKSI
Bacillus subtilis
ECH_1GLY A 174
GLY B 174
GLY C 174
None
homomer
cyclic
-
4qoy PYRUVATE DEHYDROGENASE E1 COMPONENT
Escherichia coli
Transketolase_NGLY A 284
GLY B 280
GLY B 284
None
heteromer
asymmetric
25210042
4qvs S-LAYER DOMAIN-CONTAINING PROTEIN
Hungateiclostridium thermocellum
Laminin_G_3GLY A 280
GLY A 283
GLY B 389
None
homomer
cyclic
-
4r42 ALR3090 PROTEIN
Nostoc sp. PCC 7120
Mn_catalaseGLY A  98
GLY B 119
GLY B 120
None
homomer
dihedral
26826576
4rit PYRIDOXAL-DEPENDENT DECARBOXYLASE
Sphaerobacter thermophilus
Pyridoxal_deCGLY B 201
GLY B 203
GLY A 173
None
homomer
cyclic
-
4rzi 3-KETOACYL-ACYL CARRIER PROTEIN REDUCTASE
Synechocystis sp. PCC 6803
adh_short_C2GLY A 137
GLY A 140
GLY D 156
None
homomer
dihedral
26358291
4s36 PHAGE BASEPLATE PROTEIN
Pseudomonas aeruginosa
-GLY A 165
GLY B 170
GLY B 171
None
homomer
cyclic
-
4tw1 POSSIBLE LEUKOCIDIN SUBUNIT
Staphylococcus aureus
LeukocidinGLY A  62
GLY A 226
GLY B 182
None
heteromer
cyclic
25371205
4ufq HYALURONIDASE
Streptomyces koganeiensis
-GLY B 191
GLY B 192
GLY A 178
None
homomer
cyclic
27311405
4ug1 CELL CYCLE PROTEIN GPSB
Listeria monocytogenes
DivIVAGLY A  26
GLY B  23
GLY B  26
None
homomer
cyclic
26575090
4uhv VGRG1, VALINE-GLYCINE REPEAT PROTEIN G1
Pseudomonas aeruginosa
-GLY A 598
GLY C 605
GLY C 606
None
homomer
cyclic
26894532
4usx TRIMERIC AUTOTRANSPORTER ADHESIN
Burkholderia pseudomallei
YadA_head
YadA_stalk
GLY A 707
GLY A 708
GLY C 740
None
homomer
cyclic
26527140
4wes NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN
NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN
Clostridium pasteurianum
Oxidored_nitroGLY A 474
GLY A 475
GLY B 214
None
heteromer
cyclic
25664737
4wjt UNCHARACTERIZED PROTEIN YUIC
Bacillus subtilis
3DGLY A 136
GLY B 188
GLY B 190
None
homomer
cyclic
26163297
4wza NITROGENASE IRON PROTEIN 1
NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN
Azotobacter vinelandii
Fer4_NifH
Oxidored_nitro
GLY A 160
GLY E 133
GLY E 134
None
heteromer
cyclic
25522159
4xk8 PUTATIVE UNCHARACTERIZED PROTEIN
UNCHARACTERIZED PROTEIN
Glycine max
Pisum sativum
PsaD
PsaL
GLY D  88
GLY D  89
GLY L  17
None
heteromer
asymmetric
26023133
4xt6 RV2671
Mycobacterium tuberculosis
RibD_CGLY A 200
GLY B 221
GLY B 222
None
homomer
cyclic
26848874
4xym ALPHA SUBUNIT OF ACYL-COA SYNTHETASE (NDP FORMING)
Candidatus Korarchaeum cryptofilum
CoA_binding_2
Succ_CoA_lig
GLY A 169
GLY C 415
GLY C 416
None
heteromer
cyclic
26787904
4y28 PHOTOSYSTEM I REACTION CENTER SUBUNIT II, CHLOROPLASTIC
PUTATIVE UNCHARACTERIZED PROTEIN
Pisum sativum
PsaD
PsaL
GLY L  67
GLY D  89
GLY D  90
None
heteromer
asymmetric
26076232
4ypo KETOL-ACID REDUCTOISOMERASE
Mycobacterium tuberculosis
IlvC
IlvN
GLY A 198
GLY A 199
GLY B 260
None
homomer
cyclic
26876563
4zla CYTOSOL AMINOPEPTIDASE
Helicobacter pylori
Peptidase_M17
Peptidase_M17_N
GLY A 375
GLY A 377
GLY E 434
None
homomer
dihedral
26616008
4zur ACETYLPOLYAMINE AMINOHYDROLASE
Mycoplana ramosa
Hist_deacetylGLY A  20
GLY A  21
GLY B  85
GOL B 405
homomer
cyclic
26200446
5a8s POLYHEDRIN
Cypovirus 4
CPV_PolyhedrinGLY A 197
GLY B 197
GLY C 197
None
homomer
cyclic
26291392
5aa5 NIFE-HYDROGENASE LARGE SUBUNIT, HOFG
NIFE-HYDROGENASE SMALL SUBUNIT, HOFK
Cupriavidus necator
NiFeSe_Hases
NiFeSe_Hases
NiFe_hyd_SSU_C
Oxidored_q6
GLY A 276
GLY A 277
GLY C 202
None
heteromer
dihedral
26749450
5akr COPPER-CONTAINING NITRITE REDUCTASE
Achromobacter cycloclastes
Cu-oxidase
Cu-oxidase_3
GLY A 104
GLY A 107
GLY B 258
None
homomer
cyclic
26175905
5ax6 COFB
Escherichia coli
-GLY A 281
GLY A 298
GLY C 290
None
homomer
cyclic
26876601
5b0o FLAGELLAR ASSEMBLY PROTEIN FLIH
FLAGELLUM-SPECIFIC ATP SYNTHASE
Salmonella enterica
ATP-synt_ab
FliH
GLY A  29
GLY A  43
GLY E 213
None
heteromer
asymmetric
26984495
5c1f SEPTATION PROTEIN IMP2
Schizosaccharomyces pombe
FCHGLY A  15
GLY B 271
GLY B 273
None
homomer
cyclic
26776521
5c2v HYDRAZINE SYNTHASE BETA SUBUNIT
HYDRAZINE SYNTHASE GAMMA SUBUNIT
Candidatus Kuenenia stuttgartiensis
Cytochrom_C
Cytochrom_D1
GLY B 198
GLY C 114
GLY C 307
 CA C 401
heteromer
cyclic
26479033
5cdd STRUCTURAL POLYPROTEIN, VP1
STRUCTURAL POLYPROTEIN, VP2
Israeli acute paralysis virus
CRPV_capsid
Rhv
GLY A 195
GLY C 173
GLY C 176
None
heteromer
dihedral
27279610
5ctd COLLAGEN ALPHA-1(I) CHAIN,COLLAGEN ALPHA-3(IX) CHAIN
COLLAGEN ALPHA-2(I) CHAIN,COLLAGEN ALPHA-2(IX) CHAIN
Homo sapiens
CollagenGLY B   6
GLY C   1
GLY C   3
None
heteromer
asymmetric
27897211
5cyx PROTEIN CDHR2
Mus musculus
CadherinGLY A 120
GLY B 120
GLY C 120
None
homomer
cyclic
-
5e0s ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1
ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 2
Mycobacterium tuberculosis
CLP_proteaseGLY C 145
GLY J 127
GLY J 128
None
heteromer
cyclic
26858247
5e33 DIPEPTIDYL PEPTIDASE 3
MET-ENKEPHALIN
Homo sapiens
Peptidase_M49GLY A 389
GLY B   2
GLY B   3
 ZN A 801
monomer
asymmetric
27025154
5e3q 2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-SUCCINYLTRANSFERASE
Corynebacterium glutamicum
Hexapep_2
THDPS_M
GLY A 277
GLY B 277
GLY C 277
None
homomer
cyclic
26602189
5e9g ISOCITRATE LYASE
Pyricularia oryzae
ICLGLY A 183
GLY A 184
GLY C 211
None
homomer
dihedral
27016285
5ehk LANTIBIOTIC DEHYDRATASE
Microbispora corallina
Lant_dehydr_C
Lant_dehydr_N
GLY A 888
GLY B 815
GLY B 817
None
homomer
cyclic
26877024
5enq MULTIDRUG EFFLUX PUMP SUBUNIT ACRB,MULTIDRUG EFFLUX PUMP SUBUNIT ACRB
Escherichia coli
ACR_tranGLY A 217
GLY B 751
GLY B 755
None
heteromer
cyclic
26976576
5fif CARBOXYLASE
Deinococcus radiodurans
-GLY C 453
GLY C 456
GLY D 231
None
homomer
dihedral
27396827
5fyd OXIDOREDUCTASE, SHORT CHAIN DEHYDROGENASE/REDUCTASE FAMILY PROTEIN
Collinsella aerofaciens
adh_shortGLY A 200
GLY A 201
GLY B 187
None
homomer
cyclic
27006087
5gml GOLGI REASSEMBLY-STACKING PROTEIN 2
Mus musculus
GRASP55_65GLY A   2
GLY C 185
GLY C 186
None
homomer
dihedral
-
5gvi UBIQUITIN
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 30
Danio rerio
Mus musculus
UCH
ubiquitin
GLY A 441
GLY B  75
GLY B  76
None
heteromer
asymmetric
28945247
5h69 CHROMOSOME PARTITION PROTEIN SMC
Geobacillus stearothermophilus
SMC_hingeGLY A 568
GLY A 570
GLY B 664
None
homomer
cyclic
28286005
5h9f CRISPR SYSTEM CASCADE SUBUNIT CASC
Escherichia coli
Cas_CT1975GLY D  32
GLY D  33
GLY E 303
None
heteromer
asymmetric
26863189
5hh3 OXYA PROTEIN
Actinoplanes teichomyceticus
p450GLY A 176
GLY C  44
GLY C  45
GOL C 405
homomer
asymmetric
26820384
5hsi PUTATIVE DECARBOXYLASE
Lactobacillus brevis
Pyridoxal_deCGLY A 225
GLY B 252
GLY B 254
None
homomer
cyclic
27292129
5hu3 CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE II ALPHA CHAIN
POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN EAG
Drosophila melanogaster
PkinaseGLY A 173
GLY B 791
GLY B 792
None
monomer
asymmetric
30381148
5ies GERMLINE-TARGETING HIV-1 GP120 ENGINEERED OUTER DOMAIN EOD-GT8
VRC01CHUGL2 FAB HEAVY CHAIN
Homo sapiens
C1-set
GP120
V-set
GP120
GLY H  56
GLY C 139
GLY C 140
None
heteromer
asymmetric
27013733
5iu0 RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN
Arabidopsis thaliana
RuBisCO_large
RuBisCO_large_N
GLY A 273
GLY B 272
GLY B 273
None
heteromer
cyclic
29372894
5j49 UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
Paraburkholderia xenovorans
NTP_transferaseGLY A 138
GLY A 251
GLY C 293
None
homomer
dihedral
-
5jbx 3-HYDROXYBUTYRYL-COA DEHYDRATASE
Myxococcus xanthus
ECH_1GLY A 217
GLY B 217
GLY C 217
None
homomer
cyclic
27271456
5jic TYPE II PANTOTHENATE KINASE
Staphylococcus aureus
FumbleGLY A 122
GLY A 126
GLY B 177
ADP A 302
homomer
cyclic
27759386
5kbe MOPR
Acinetobacter calcoaceticus
V4R
XylR_N
GLY A  34
GLY B 107
GLY B 110
None
homomer
cyclic
27362503
5kkv GCN4-P2L
Eukaryota
-GLY A   1
GLY B   1
GLY C   1
None
homomer
cyclic
27500907
5ko5 PURINE NUCLEOSIDE PHOSPHORYLASE
Schistosoma mansoni
PNP_UDP_1GLY A 144
GLY B 144
GLY C 144
None
homomer
cyclic
30192840
5kxh COAGULATION FACTOR VII
GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
Mus musculus
EGF
O-FucT
GLY A  47
GLY B  99
GLY B 100
None
heteromer
asymmetric
28530709
5l8s AMINO ACYL PEPTIDASE
Sporosarcina psychrophila
Peptidase_S9GLY A  95
GLY A  96
GLY C 335
None
homomer
cyclic
27739253
5leo GLY-GLY-GLY-GLY-GLY
LYSOSTAPHIN
Staphylococcaceae
SH3_5GLY A 430
GLY H   3
GLY H   4
None
monomer
asymmetric
-
5mdr CHITOPORIN
Vibrio harveyi
Porin_4GLY A  90
GLY B  90
GLY C  90
None
homomer
cyclic
29335469
5mwn TYPE VI SECRETION PROTEIN
Escherichia coli
T6SS_VasEGLY A 110
GLY A 111
GLY C 137
None
heteromer
asymmetric
28650463
5n1t CYTOCHROME C
FLAVIN-BINDING SUBUNIT OF SULFIDE DEHYDROGENASE
Thioalkalivibrio paradoxus
Cytochrom_C
FCSD-flav_bind
Pyr_redox_2
GLY A 414
GLY B  23
GLY B  24
None
heteromer
asymmetric
29968673
5ntd LEUCYL AMINOPEPTIDASE
Trypanosoma brucei
-GLY C 347
GLY B 347
GLY A 347
None
homomer
dihedral
28815215
5nx1 AMYLOID-BETA A4 PROTEIN
Homo sapiens
Kunitz_BPTIGLY B  12
GLY D  39
GLY D  40
None
heteromer
asymmetric
29934309
5nxh LONG-TAIL FIBER PROXIMAL SUBUNIT
Escherichia virus T4
-GLY A1110
GLY B1116
GLY B1117
None
homomer
asymmetric
28665339
5o5c PUTATIVE DECARBOXYLASE INVOLVED IN DESFERRIOXAMINE BIOSYNTHESIS
Erwinia amylovora
Pyridoxal_deCGLY A 197
GLY B 225
GLY B 227
None
homomer
cyclic
29428557
5obt VACUOLAR-PROCESSING ENZYME GAMMA-ISOZYME
Arabidopsis thaliana
Peptidase_C13GLY A  89
GLY A  90
GLY E 329
None
heteromer
asymmetric
29628443
5olc GALACTONATE DEHYDRATASE
Zobellia galactanivorans
MR_MLE_C
MR_MLE_N
GLY A  73
GLY E 122
GLY E 123
None
homomer
dihedral
29162826
5ovk 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE FABG
Mycolicibacterium smegmatis
adh_short_C2GLY A 151
GLY A 154
GLY C 170
None
homomer
dihedral
29717709
5ow3 PROTEIN HAPLESS 2
Arabidopsis thaliana
HAP2-GCS1GLY A 242
GLY B 245
GLY B 246
None
homomer
cyclic
30102690
5oy0 PHOTOSYSTEM I REACTION CENTER SUBUNIT II
PHOTOSYSTEM I REACTION CENTER SUBUNIT XI
Synechocystis sp. PCC 6803
PsaD
PsaL
GLY 4  16
GLY 4  17
GLY 0  18
None
heteromer
cyclic
29414678
5svb ACETONE CARBOXYLASE ALPHA SUBUNIT
ACETONE CARBOXYLASE BETA SUBUNIT
Xanthobacter autotrophicus
Hydant_A_N
Hydantoinase_B
Hydantoinase_A
GLY A 501
GLY A 580
GLY B 101
None
heteromer
cyclic
28775283
5tb7 NITRITE REDUCTASE
Neisseria gonorrhoeae
Cu-oxidase
Cu-oxidase_3
GLY A 143
GLY A 146
GLY B 283
None
homomer
cyclic
28584144
5tow ADENOSYLHOMOCYSTEINASE
Thermotoga maritima
AdoHcyaseGLY A 196
GLY A 219
GLY D 239
None
homomer
cyclic
28629859
5u8p SHORT CHAIN DEHYDROGENASE
Burkholderia cenocepacia
adh_short_C2GLY A 316
GLY B 324
GLY B 326
None
homomer
dihedral
-
5v13 AAEL008620-PA ODORANT-BINDING PROTEIN
Aedes aegypti
PBP_GOBPGLY B 166
GLY A 159
GLY A 161
None
homomer
cyclic
28751377
5v5h RNA-DIRECTED RNA POLYMERASE L
UBIQUITIN VARIANT CC.2
Crimean-Congo hemorrhagic fever orthonairovirus
synthetic construct
OTU
ubiquitin
GLY A 100
GLY B  74
GLY B  75
None
heteromer
asymmetric
28542609
5v6l ENVELOPE GLYCOPROTEIN, V3 REGION
HEAVY CHAIN OF FAB FRAGMENT OF RABBIT ANTI-HIV1 GP120 V3 MAB 10A37
Human immunodeficiency virus 1
Oryctolagus cuniculus
C1-set
V-set
GLY H 100
GLY P 312
GLY P 314
None
heteromer
asymmetric
29343576
5vym BETA-GALACTOSIDASE BGAB
Bifidobacterium adolescentis
Glyco_hydro_42MGLY A  84
GLY A  85
GLY B 200
None
homomer
cyclic
-
5was HOMOSERINE KINASE
Corynebacterium glutamicum
GHMP_kinases_NGLY A 147
GLY A 148
GLY C 300
None
heteromer
cyclic
30023797
5whk DX-2507 FAB LIGHT CHAIN
IGG RECEPTOR FCRN LARGE SUBUNIT P51
Homo sapiens
C1-set
C1-set
V-set
MHC_I
GLY L  52
GLY A  83
GLY A  84
EDO A 303
heteromer
asymmetric
28878017
5wmf EPSTEIN-BARR NUCLEAR ANTIGEN 1
Human gammaherpesvirus 4
EBV-NA1GLY B 511
GLY B 512
GLY C 548
None
homomer
cyclic
28701406
5xea ENVELOPE GLYCOPROTEIN
Thogoto thogotovirus
-GLY B  82
GLY C 460
GLY C 461
None
homomer
cyclic
29073031
5xlu GAMMA GLUTAMYL TRANSPEPTIDASE
Bacillus licheniformis
G_glu_transpeptGLY A  40
GLY A  43
GLY B 577
None
heteromer
asymmetric
-
5xod MOTHERS AGAINST DECAPENTAPLEGIC HOMOLOG 2
SKI ONCOGENE
Homo sapiens
MH2GLY A 444
GLY B  33
GLY B  34
None
heteromer
cyclic
29588413
5xqg PCRGLX PROTEIN
Penicillium chrysogenum
-GLY A 295
GLY A 296
GLY D 886
None
homomer
cyclic
29574769
5xux CONSERVED PROTEIN
Methanosarcina mazei
RibD_CGLY A 184
GLY A 185
GLY B 196
None
homomer
cyclic
29864427
5yn3 XYLOSE ISOMERASE
Piromyces sp. E2
AP_endonuc_2GLY A  62
GLY A  63
GLY C 147
None
homomer
dihedral
29385668
5yzc GLYCOPROTEIN F1,MEASLES VIRUS FUSION PROTEIN
Measles morbillivirus
Fusion_glyGLY B 120
GLY B 124
GLY D 384
None
heteromer
cyclic
29463726
5z2e DIHYDRODIPICOLINATE REDUCTASE
Paenisporosarcina sp. TG-14
DapB_C
DapB_N
GLY A 211
GLY B 221
GLY B 222
None
homomer
dihedral
29786696
6b9x HEPATITIS B VIRUS X INTERACTING PROTEIN
RAGULATOR COMPLEX PROTEIN LAMTOR3
Homo sapiens
LAMTOR5
MAPKK1_Int
GLY C 101
GLY E 110
GLY E 125
None
heteromer
asymmetric
29107538
6bsg REVERSE TRANSCRIPTASE P51 SUBUNIT
REVERSE TRANSCRIPTASE P66 SUBUNIT
Human immunodeficiency virus 1
RNase_H
RVT_thumb
RVT_1
RVT_connect
RVT_thumb
GLY A 543
GLY A 544
GLY B 285
None
heteromer
asymmetric
29295939
6chu CITRATE LYASE SUBUNIT BETA-LIKE PROTEIN
Mycobacterium tuberculosis
HpcH_HpaIGLY A 144
GLY A 145
GLY C 202
None
homomer
cyclic
31320588
6dzs HOMOSERINE DEHYDROGENASE
Mycolicibacterium hassiacum
ACT
Homoserine_dh
NAD_binding_3
GLY A 332
GLY B 331
GLY B 332
None
homomer
cyclic
-
6ehp RAGULATOR COMPLEX PROTEIN LAMTOR3
RAGULATOR COMPLEX PROTEIN LAMTOR5
Homo sapiens
LAMTOR5
MAPKK1_Int
GLY A 101
GLY C  28
GLY C  43
None
heteromer
asymmetric
28935770
6f3p ADENOSYLHOMOCYSTEINASE
Pseudomonas aeruginosa
AdoHcyase
AdoHcyase_NAD
GLY A 221
GLY A 244
GLY B 264
None
homomer
dihedral
30054521
6g96 ACETYLTRANSFERASE
Salmonella enterica
-GLY B 126
GLY B 127
GLY A  42
None
homomer
cyclic
29777131
7ahl ALPHA-HEMOLYSIN
Staphylococcus aureus
LeukocidinGLY A 126
GLY B 133
GLY B 134
None
homomer
cyclic
8943190