PDBID | Molecule/Organism | Pfam | Residues | HETATM | Symmetry | Pubmed | View |
---|---|---|---|---|---|---|---|
1k28 | TAIL-ASSOCIATED LYSOZYMEEscherichia virus T4 | Gp5_CGp5_OBPhage_lysozyme | GLY A 322GLY A 459GLY A 460GLY E 452 | None | heteromercyclic | 11823865 | |
1k6y | INTEGRASEHuman immunodeficiency virus 1 | - | GLY B 189GLY B 190GLY B 193GLY D 190 | None | homomercyclic | 11743009 | |
1ocy | BACTERIOPHAGE T4 SHORT TAIL FIBREEscherichia virus T4 | CollarS_tail_recep_bd | GLY A 397GLY B 402GLY B 404GLY B 431 | None | homomercyclic | 12888344 | |
1tdj | BIOSYNTHETIC THREONINE DEAMINASEEscherichia coli | PALPThr_dehydrat_C | GLY A 424GLY A 425GLY B 424GLY B 425 | None | homomercyclic | 9562556 | |
1ye9 | CATALASE HPIIEscherichia coli | Catalase | GLY A 172GLY A 174GLY D 172GLY D 174 | None | heteromerdihedral | 15823018 | |
2b3z | RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBDBacillus subtilis | RibD_CdCMP_cyt_deam_1 | GLY A 318GLY A 319GLY B 328GLY B 330 | None | homomerdihedral | - | |
2buf | ACETYLGLUTAMATE KINASEPseudomonas aeruginosa | AA_kinase | GLY A 105GLY A 106GLY B 105GLY B 106 | None | homomerdihedral | 16376937 | |
2dv6 | NITRITE REDUCTASEHyphomicrobium denitrificans | Cu-oxidase_3 | GLY A 228GLY A 230GLY A 231GLY C 368 | None | homomerdihedral | 17360521 | |
2epl | N-ACETYL-BETA-D-GLUCOSAMINIDASEStreptococcus gordonii | Glyco_hydro_20 | GLY X 564GLY X 565GLY A 564GLY A 565 | None | homomercyclic | 18237743 | |
2hp3 | IDS-EPIMERASEAgrobacterium tumefaciens | MmgE_PrpD | GLY A 57GLY A 58GLY B 57GLY B 58 | None | homomercyclic | 16934291 | |
2j91 | ADENYLOSUCCINATE LYASEHomo sapiens | ADSL_CLyase_1 | GLY A 5GLY A 8GLY D 5GLY D 8 | None | homomerdihedral | - | |
2nyt | PROBABLE C->U-EDITING ENZYME APOBEC-2Homo sapiens | APOBEC_N | GLY A 37GLY A 38GLY B 37GLY B 38 | None | homomercyclic | 17187054 | |
2ovl | PUTATIVE RACEMASEStreptomyces coelicolor | MR_MLE_CMR_MLE_N | GLY A 97GLY A 98GLY B 97GLY B 98 | None | homomercyclic | - | |
2wzv | NFNB PROTEINMycolicibacterium smegmatis | Nitroreductase | GLY A 157GLY A 160GLY B 157GLY B 160 | None | homomercyclic | 20624223 | |
2ynm | LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEINProchlorococcus marinus | Fer4_NifH | GLY A 38GLY A 39GLY B 38GLY B 39 | ADP A1300ADP B1299AF3 A1299AF3 B1298 | heteromercyclic | 23341615 | |
2zoo | PROBABLE NITRITE REDUCTASEPseudoalteromonas haloplanktis | Cu-oxidaseCu-oxidase_3Cytochrom_C | GLY A 93GLY A 95GLY A 96GLY C 233 | None | homomercyclic | - | |
3c8l | FTSZ-LIKE PROTEIN OF UNKNOWN FUNCTIONNostoc punctiforme | Lin0512_fam | GLY A 88GLY A 89GLY B 88GLY B 89 | GOL A 126 | homomerdihedral | - | |
3csw | PUTATIVE BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASEThermotoga maritima | Aminotran_4 | GLY A 28GLY A 136GLY B 28GLY B 136 | None | homomerdihedral | - | |
3ea0 | ATPASE, PARA FAMILYChlorobaculum tepidum | AAA_31 | GLY A 11GLY A 12GLY B 11GLY B 12 | ATP A 243ATP B 243 | homomercyclic | - | |
3fcy | XYLAN ESTERASE 1Thermoanaerobacterium saccharolyticum | AXE1 | GLY A 127GLY A 128GLY B 127GLY B 128 | None | homomerdihedral | - | |
3fsd | NTF2-LIKE PROTEIN OF UNKNOWN FUNCTION IN NUTRIENT UPTAKERhodospirillum rubrum | DUF4440 | GLY A 82GLY A 85GLY B 82GLY B 85 | None | homomercyclic | - | |
3ged | SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDRHungateiclostridium thermocellum | adh_short_C2 | GLY A 151GLY A 152GLY C 151GLY C 152 | None | homomerdihedral | 19774618 | |
3itw | PROTEIN TIOXMicromonospora sp. ML1 | Glyoxalase | GLY A 44GLY A 45GLY C 44GLY C 45 | None | homomercyclic | 20122935 | |
3r9i | SEPTUM SITE-DETERMINING PROTEIN MINDEscherichia coli | CbiA | GLY A 12GLY A 13GLY B 12GLY B 13 | ADP A 261ADP B 261 | homomercyclic | 21816275 | |
3tsa | NDP-RHAMNOSYLTRANSFERASESaccharopolyspora spinosa | DUF1205 | GLY A 45GLY A 47GLY B 45GLY B 47 | None | homomercyclic | 22283226 | |
3u0g | PUTATIVE BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE ILVEBurkholderia pseudomallei | Aminotran_4 | GLY A 34GLY A 164GLY B 34GLY B 164 | None | homomerdihedral | - | |
3u35 | GENERAL STRESS PROTEINXanthomonas citri | Pyrid_ox_like | GLY A 96GLY B 96GLY C 96GLY D 96 | None | homomerdihedral | 22751670 | |
3ug7 | ARSENICAL PUMP-DRIVING ATPASEMethanocaldococcus jannaschii | ArsA_ATPase | GLY A 35GLY A 36GLY B 35GLY B 36 | ADP A 401ADP B 401 | homomerdihedral | 22124326 | |
3ziy | COPPER-CONTAINING NITRITE REDUCTASERalstonia pickettii | Cu-oxidase_3Cytochrome_CBB3 | GLY A 103GLY A 105GLY A 106GLY C 243 | None | homomercyclic | 23535590 | |
3zq6 | PUTATIVE ARSENICAL PUMP-DRIVING ATPASEMethanothermobacter thermautotrophicus | ArsA_ATPase | GLY A 23GLY A 24GLY B 23GLY B 24 | ADP A 401ADP B 401ALF A 402ALF B 402 | homomercyclic | 21658170 | |
3zqo | TERMINASE SMALL SUBUNITBacillus phage SF6 | Terminase_2 | GLY A 92GLY A 94GLY A 96GLY B 96 | None | homomercyclic | 22207627 | |
3zs9 | ATPASE GET3Saccharomyces cerevisiae | ArsA_ATPase | GLY A 27GLY A 28GLY B 27GLY B 28 | ADP A 401ADP B 401ALF A 402ALF B 402 | heteromercyclic | 21866104 | |
4cr6 | N-ACYLMANNOSAMINE 1-DEHYDROGENASEFlavobacterium sp. 141-8 | adh_short_C2 | GLY A 171GLY A 172GLY C 171GLY C 172 | None | homomerdihedral | 24969681 | |
4fei | HEAT SHOCK PROTEIN-RELATED PROTEINDeinococcus radiodurans | HSP20 | GLY A 129GLY A 130GLY B 129GLY B 130 | None | homomercyclic | 23184973 | |
4h0o | ACETATE KINASEEntamoeba histolytica | Acetate_kinase | GLY A 306GLY A 307GLY B 306GLY B 307 | None | homomercyclic | 23159802 | |
4hia | LOV PROTEINRhodobacter sphaeroides | PAS_9 | GLY A 134GLY A 137GLY B 134GLY B 137 | None | homomercyclic | 23252338 | |
4hr3 | PUTATIVE ACYL-COA DEHYDROGENASEMycobacteroides abscessus | Acyl-CoA_dh_1Acyl-CoA_dh_MAcyl-CoA_dh_N | GLY A 304GLY A 305GLY C 304GLY C 305 | None | homomerdihedral | 25613812 | |
4j8c | HSC70-INTERACTING PROTEINRattus norvegicus | HipN | GLY A 39GLY A 40GLY B 39GLY B 40 | None | homomercyclic | 23812373 | |
4kem | MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYMEAzospirillum lipoferum | MR_MLE_C | GLY A 103GLY A 105GLY B 103GLY B 105 | None | homomercyclic | - | |
4lij | FAR UPSTREAM ELEMENT-BINDING PROTEIN 1Homo sapiens | KH_1 | GLY A 116GLY A 118GLY A 119GLY B 118 | None | homomerasymmetric | - | |
4nn1 | TRANSCRIPTIONAL REGULATORMycobacterium tuberculosis | TetR_N | GLY A 152GLY A 153GLY B 152GLY B 153 | None | homomercyclic | 24424575 | |
4rmm | PUTATIVE UNCHARACTERIZED PROTEINChromobacterium violaceum | 4HBT | GLY A 67GLY A 68GLY B 67GLY B 68 | None | homomercyclic | - | |
4s36 | PHAGE BASEPLATE PROTEINPseudomonas aeruginosa | - | GLY A 165GLY B 169GLY B 170GLY B 171 | None | homomercyclic | - | |
4w97 | HTH-TYPE TRANSCRIPTIONAL REPRESSOR KSTR2Mycobacterium tuberculosis | TetR_N | GLY A 193GLY A 194GLY B 193GLY B 194 | None | homomercyclic | 25406313 | |
5aun | ATPASE INVOLVED IN CHROMOSOME PARTITIONING, PARA/MIND FAMILY, MRP HOMOLOGThermococcus kodakarensis | ParA | GLY B 29GLY B 30GLY D 29GLY D 30 | ADP B 301ADP D 301 | heteromercyclic | 26056269 | |
5ax6 | COFBEscherichia coli | - | GLY A 281GLY A 298GLY A 300GLY C 290 | None | homomercyclic | 26876601 | |
5b5v | MOB KINASE ACTIVATOR 1BMus musculus | Mob1_phocein | GLY A 37GLY A 39GLY C 37GLY C 39 | None | homomercyclic | 27335147 | |
5ce8 | BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASEThermoproteus uzoniensis | Aminotran_4 | GLY A 27GLY A 153GLY D 27GLY D 153 | None | homomerdihedral | 26872794 | |
5fgl | NICRPseudomonas putida | TetR_N | GLY A 224GLY A 225GLY B 224GLY B 225 | None | homomercyclic | - | |
5h69 | CHROMOSOME PARTITION PROTEIN SMCGeobacillus stearothermophilus | SMC_hinge | GLY A 568GLY A 570GLY B 663GLY B 664 | None | homomercyclic | 28286005 | |
5ies | GERMLINE-TARGETING HIV-1 GP120 ENGINEERED OUTER DOMAIN EOD-GT8VRC01CHUGL2 FAB HEAVY CHAINHomo sapiens | C1-setGP120V-setGP120 | GLY H 55GLY H 56GLY C 139GLY C 140 | None | heteromerasymmetric | 27013733 | |
5j1j | SITE-DETERMINING PROTEINPseudomonas aeruginosa | ParA | GLY A 20GLY A 21GLY B 20GLY B 21 | ANP A 301ANP B 501 | homomercyclic | 28065505 | |
5k5z | PARASulfolobus sp. NOB8H2 | AAA_31 | GLY A 13GLY A 14GLY D 13GLY D 14 | ANP A 701ANP D 701 | homomercyclic | 26339031 | |
5ktl | 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASETrichormus variabilis | DHDPS | GLY A 140GLY A 143GLY B 140GLY B 143 | None | homomerdihedral | 27845445 | |
5tb7 | NITRITE REDUCTASENeisseria gonorrhoeae | Cu-oxidaseCu-oxidase_3 | GLY A 143GLY A 145GLY A 146GLY B 283 | PO4 A 503 | homomercyclic | 28584144 | |
5tjz | 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASEMycobacterium tuberculosis | DapB_CDapB_N | GLY A 171GLY A 174GLY D 171GLY D 174 | None | homomerdihedral | - | |
5xux | CONSERVED PROTEINMethanosarcina mazei | RibD_C | GLY A 184GLY A 185GLY B 194GLY B 196 | None | homomercyclic | 29864427 | |
5z2e | DIHYDRODIPICOLINATE REDUCTASEPaenisporosarcina sp. TG-14 | DapB_CDapB_N | GLY A 193GLY A 196GLY B 193GLY B 196 | None | homomerdihedral | 29786696 |