PDBID Molecule/
Organism
Pfam Residues HETATM Symmetry Pubmed View
1e6y METHYL-COENZYME M REDUCTASE I BETA SUBUNIT
METHYL-COENZYME M REDUCTASE SUBUNIT ALPHA
Methanosarcina barkeri
MCR_alpha
MCR_alpha_N
PHE A1267
ALA A1268
ALA A1272
PHE E5404
MHS A1271
heteromer
cyclic
11023796
1h21 SPLIT-SORET CYTOCHROME C
Desulfovibrio desulfuricans
C_GCAxxG_C_CALA A  16
PHE A  17
PHE B  42
ALA B  70
None
homomer
cyclic
12589573
1iom CITRATE SYNTHASE
Thermus thermophilus
Citrate_syntPHE A 191
ALA A 195
PHE B 191
ALA B 195
None
homomer
cyclic
-
1otv COENZYME PQQ SYNTHESIS PROTEIN C
Klebsiella pneumoniae
TENA_THI-4PHE A 123
ALA B 124
ALA B 127
PHE B 213
None
homomer
cyclic
15148379
1q52 MENB
Mycobacterium tuberculosis
ECH_1PHE C 278
ALA C 279
ALA C 282
PHE F 278
None
homomer
dihedral
12909628
1s67 HYPOTHETICAL PROTEIN YDDU
Escherichia coli
PAS_9ALA L  17
ALA L  18
PHE L  23
PHE U  22
None
homomer
cyclic
15005609
1sdo BSTYI
Geobacillus stearothermophilus
Endonuc-BglIIALA A 138
PHE A 142
ALA B 138
PHE B 142
None
homomer
cyclic
15099740
1vlh PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
Thermotoga maritima
CTP_transf_likeALA A  90
PHE A 124
ALA F  90
PHE F 124
None
homomer
dihedral
-
1wn2 PEPTIDYL-TRNA HYDROLASE
Pyrococcus horikoshii
PTH2ALA A  36
ALA A  39
PHE A  47
PHE B  37
None
homomer
cyclic
18391411
1wst MULTIPLE SUBSTRATE AMINOTRANSFERASE
Thermococcus profundus
Aminotran_1_2ALA A  65
PHE A 290
ALA B  65
PHE B 290
None
homomer
cyclic
-
1yox HYPOTHETICAL PROTEIN PA3696
Pseudomonas aeruginosa
-ALA B 235
PHE C 138
PHE C 225
ALA C 229
None
homomer
cyclic
-
1z2i MALATE DEHYDROGENASE
Agrobacterium tumefaciens
Ldh_2ALA A  84
PHE A 113
ALA B  84
PHE B 113
None
homomer
cyclic
-
2h12 CITRATE SYNTHASE
Acetobacter aceti
Citrate_syntALA A 148
ALA A 151
PHE B 128
PHE B 132
None
homomer
dihedral
17087502
2hjp PHOSPHONOPYRUVATE HYDROLASE
Variovorax sp. Pal2
PEP_mutaseALA A  31
ALA A  34
PHE A  36
PHE D 250
None
homomer
dihedral
16981709
2hy5 INTRACELLULAR SULFUR OXIDATION PROTEIN DSRF
PUTATIVE SULFURTRANSFERASE DSRE
Allochromatium vinosum
DrsEALA A 119
PHE B 208
ALA B 332
PHE B 334
None
heteromer
cyclic
-
2oie RS21-C6
Mus musculus
MazG-likeALA A 107
ALA A 108
PHE B  23
PHE B  25
None
homomer
dihedral
17320107
2po3 4-DEHYDRASE
Streptomyces venezuelae
DegT_DnrJ_EryC1ALA A1101
ALA A1102
PHE B2227
PHE B2229
T4K A1500
homomer
cyclic
17630700
3dm8 UNCHARACTERIZED PROTEIN RPA4348
Rhodopseudomonas palustris
SnoaL_2ALA A 106
PHE A 108
ALA B 106
PHE B 108
None
homomer
cyclic
-
3f7x PUTATIVE POLYKETIDE CYCLASE
Pseudomonas putida
SnoaL_2ALA A  76
PHE A 107
ALA B  76
PHE B 107
None
homomer
cyclic
-
3g80 PROTEIN B2
Nodamura virus
-PHE A  46
PHE A  49
ALA B  57
ALA B  60
None
homomer
cyclic
19249868
3hf1 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 B
Homo sapiens
Ribonuc_red_smALA A  97
ALA A  98
PHE A 156
PHE B  42
None
homomer
cyclic
19728742
3hrd NICOTINATE DEHYDROGENASE MEDIUM MOLYBDOPTERIN SUBUNIT
Eubacterium barkeri
Ald_Xan_dh_C2PHE B  27
ALA B 159
PHE F  27
ALA F 159
None
heteromer
cyclic
19549881
3kv1 TRANSCRIPTIONAL REPRESSOR
Aliivibrio fischeri
Sugar-bindALA A 129
PHE A 130
ALA B 129
PHE B 130
None
homomer
cyclic
-
3mkq COATOMER BETA'-SUBUNIT
COATOMER SUBUNIT ALPHA
Saccharomyces cerevisiae
Coatomer_WDAD
Coatomer_WDAD
WD40
WD40
PHE A 697
PHE A 720
ALA B 764
ALA B 768
None
heteromer
cyclic
20579721
3rh7 HYPOTHETICAL OXIDOREDUCTASE
Sinorhizobium meliloti
Flavin_ReductALA A 116
PHE A 118
ALA B  14
PHE B  15
None
homomer
cyclic
-
3ro6 PUTATIVE CHLOROMUCONATE CYCLOISOMERASE
Methylococcus capsulatus
-PHE B 251
ALA B 254
ALA B 255
PHE C 251
None
homomer
cyclic
22392983
4jps PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT ALPHA
PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT ALPHA ISOFORM
Homo sapiens
PI3K_C2
PI3K_P85_iSH2
PI3K_rbd
PI3Ka
PI3_PI4_kinase
SH2
PI3K_p85B
PHE A  95
ALA B 483
ALA B 486
PHE B 487
None
heteromer
asymmetric
23726034
4loc PYRUVATE CARBOXYLASE
Rhizobium etli
HMGL-like
PYC_OADA
ALA A1038
PHE A1051
ALA D1038
PHE D1051
None
homomer
dihedral
25157442
4mmo SSO-CP2 METALLO-CARBOXYPETIDASE
Saccharolobus solfataricus
Peptidase_M20ALA A 212
PHE A 287
ALA B 212
PHE B 287
None
homomer
cyclic
-
4s17 GLUTAMINE SYNTHETASE
Bifidobacterium adolescentis
Gln-synt_C
Gln-synt_N
ALA A 178
PHE A 179
ALA B 260
PHE J 476
None
homomer
dihedral
-
4xgq RIBONUCLEASE VAPC30
Mycobacterium tuberculosis
PINALA A  36
PHE A 101
ALA C  36
PHE C 101
None
heteromer
cyclic
26150422
4ymr PROTEIN SNX21
Mus musculus
-ALA A 277
ALA A 280
PHE B 311
PHE B 315
None
homomer
cyclic
25882846
4zil DSBA OXIDOREDUCTASE
Mycobacterium tuberculosis
DSBAALA A 183
PHE A 187
ALA B 183
PHE B 187
None
homomer
cyclic
26546681
5bpd TRMBL2
Pyrococcus furiosus
-ALA C  26
ALA C  29
PHE C  30
PHE D 233
IMD C 302
homomer
cyclic
26299937
5ibz UNCHARACTERIZED PROTEIN
uncultured organism
CyclaseALA A  62
PHE A 319
ALA C  62
PHE C 319
None
homomer
dihedral
-
5iws PROTEIN-N(PI)-PHOSPHOHISTIDINE-SUGAR PHOSPHOTRANSFERASE (ENZYME II OF THE PHOSPHOTRANSFERASE SYSTEM) (PTS SYSTEM GLUCOSE-SPECIFIC IIBC COMPONENT)
Bacillus cereus
PTS_EIICALA A 344
ALA A 347
PHE B 172
PHE B 173
None
homomer
cyclic
27161976
5iy5 CYTOCHROME C OXIDASE SUBUNIT 1
CYTOCHROME C OXIDASE SUBUNIT 3
Bos taurus
COX1
COX3
ALA A 203
ALA A 204
PHE C  93
PHE C  97
PEK C 303
heteromer
asymmetric
27979921
5le5 PROTEASOME SUBUNIT BETA TYPE-2
PROTEASOME SUBUNIT BETA TYPE-3
Homo sapiens
ProteasomePHE I  27
PHE I  38
ALA I  56
ALA J 123
None
heteromer
cyclic
27493187
5ubm COMPLEMENT C1S SUBCOMPONENT
Homo sapiens
Sushi
Sushi
Trypsin
ALA A 444
PHE A 449
ALA A 584
PHE B 432
None
heteromer
asymmetric
29061764
5vog PUTATIVE PHOSPHORIBOSYLTRANSFERASE
Neisseria gonorrhoeae
PribosyltranALA A  35
PHE A  41
ALA A  57
PHE B  41
None
homomer
cyclic
-
5wur ANTI-SIGMA-W FACTOR RSIW
ECF RNA POLYMERASE SIGMA FACTOR SIGW
Bacillus subtilis
Sigma70_r2
Sigma70_r4_2
zf-HC2
ALA A  49
ALA A  52
PHE A  53
PHE C  63
None
heteromer
asymmetric
28319136
5xtf 2,3-DIHYDROXY-2,3-DIHYDROPHENYLPROPIONATE DEHYDROGENASE
Pseudomonas sp. MC1
adh_short_C2PHE A 110
ALA A 155
PHE D 110
ALA D 159
None
homomer
dihedral
28728845
6bus REGULATORY PROTEIN E2
Deltapapillomavirus 4
PPV_E2_CALA 1 406
PHE 2 328
PHE 2 404
ALA 2 406
None
homomer
cyclic
31299114