PDBID |
Molecule/Organism |
Pfam |
Residues |
HETATM |
Symmetry |
Pubmed |
View |
1cmb | MET APO-REPRESSOREscherichia coli | MetJ | ALA A 60ALA A 64ALA B 60ALA B 64 | None | homomercyclic | 2677753 | |
1khd | ANTHRANILATE PHOSPHORIBOSYLTRANSFERASEPectobacterium carotovorum | Glycos_trans_3NGlycos_transf_3 | ALA A 49ALA A 50ALA D 49ALA D 50 | None | homomercyclic | 12123839 | |
1l7d | NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE, SUBUNIT ALPHA 1Rhodospirillum rubrum | AlaDh_PNT_CAlaDh_PNT_N | ALA A 157ALA B 443ALA B 728ALA B 729 | None | homomercyclic | 12379117 | |
1nxm | DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASEStreptococcus suis | dTDP_sugar_isom | ALA A 87ALA A 137ALA B 87ALA B 137 | None | homomercyclic | 12791259 | |
1ub3 | ALDOLASE PROTEINThermus thermophilus | DeoC | ALA A 78ALA A 82ALA B 78ALA B 82 | None | homomerdihedral | 15388928 | |
1ukk | OSMOTICALLY INDUCIBLE PROTEIN CThermus thermophilus | OsmC | ALA A 6ALA B 51ALA B 52ALA B 55 | None | homomercyclic | 15111059 | |
1vr6 | PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASEThermotoga maritima | DAHP_synth_1 | ALA A 286ALA A 289ALA B 286ALA B 289 | None | homomerdihedral | - | |
1vs1 | 3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASEAeropyrum pernix | DAHP_synth_1 | ALA A 230ALA A 233ALA D 230ALA D 233 | None | homomerdihedral | - | |
1w85 | PYRUVATE DEHYDROGENASE E1 COMPONENT, BETA SUBUNITGeobacillus stearothermophilus | Transket_pyrTransketolase_C | ALA B 270ALA B 274ALA D 270ALA D 274 | None | heteromerasymmetric | 15514159 | |
1yiz | KYNURENINE AMINOTRANSFERASE GLUTAMINE TRANSAMINASEAedes aegypti | Aminotran_1_2 | ALA A 60ALA A 63ALA B 60ALA B 63 | None | homomercyclic | 15853804 | |
2axt | PHOTOSYSTEM II REACTION CENTER D2 PROTEINPHOTOSYSTEM Q(B) PROTEINThermosynechococcus elongatus | Photo_RC | ALA A 146ALA A 276ALA D 212ALA D 216 | LHG A 567PHO A 561 | heteromercyclic | 16355230 | |
2b9c | STRIATED-MUSCLE ALPHA TROPOMYOSINRattus norvegicus | Tropomyosin | ALA A 116ALA A 119ALA A 120ALA B1120 | None | homomerasymmetric | 16365313 | |
2c7y | 3-KETOACYL-COA THIOLASE 2Arabidopsis thaliana | Thiolase_CThiolase_N | ALA A 41ALA B 150ALA B 151ALA B 154 | None | homomercyclic | 16630629 | |
2esn | PROBABLE TRANSCRIPTIONAL REGULATORPseudomonas aeruginosa | HTH_1LysR_substrate | ALA A 78ALA A 81ALA D 78ALA D 81 | None | homomercyclic | - | |
2h6r | TRIOSEPHOSPHATE ISOMERASEMethanocaldococcus jannaschii | TIM | ALA A 126ALA A 129ALA C 126ALA C 129 | None | homomerdihedral | 17242514 | |
2hhz | PYRIDOXAMINE 5'-PHOSPHATE OXIDASE-RELATEDStreptococcus suis | Putative_PNPOx | ALA A 19ALA A 29ALA B 19ALA B 29 | None | homomercyclic | - | |
2iz6 | MOLYBDENUM COFACTOR CARRIER PROTEINChlamydomonas reinhardtii | LDcluster4 | ALA A 114ALA A 117ALA B 114ALA B 117 | None | homomerdihedral | 16873364 | |
2jae | L-AMINO ACID OXIDASERhodococcus opacus | Amino_oxidase | ALA A 147ALA A 152ALA B 147ALA B 152 | None | homomercyclic | 17234209 | |
2np3 | PUTATIVE TETR-FAMILY REGULATORStreptomyces coelicolor | TetR_N | ALA A 203ALA A 206ALA B 203ALA B 206 | None | homomercyclic | - | |
2nql | ISOMERASE/LACTONIZING ENZYMEAgrobacterium fabrum | MR_MLE_CMR_MLE_N | ALA A 77ALA A 80ALA B 77ALA B 80 | None | homomercyclic | - | |
2oxg | SOXY PROTEINSOXZ PROTEINParacoccus denitrificans | - | ALA Z 79ALA Y 67ALA Y 68ALA Y 69 | None | heteromerasymmetric | 17522046 | |
2p10 | MLL9387 PROTEINMesorhizobium japonicum | PEP_hydrolase | ALA A 266ALA A 269ALA B 266ALA B 269 | None | homomerdihedral | - | |
2p12 | HYPOTHETICAL PROTEIN DUF402Rhodococcus jostii | DUF402 | ALA A 152ALA A 153ALA B 152ALA B 153 | None | homomercyclic | - | |
2qkf | 3-DEOXY-D-MANNO-OCTULOSONIC ACID 8- PHOSPHATE SYNTHETASENeisseria meningitidis | DAHP_synth_1 | ALA A 224ALA A 227ALA B 224ALA B 227 | None | homomerdihedral | - | |
2rag | DIPEPTIDASECaulobacter vibrioides | Peptidase_M19 | ALA A 128ALA A 129ALA B 128ALA B 129 | None | homomercyclic | - | |
2zad | MUCONATE CYCLOISOMERASEThermotoga maritima | MR_MLE_CMR_MLE_N | ALA A 62ALA A 65ALA F 62ALA F 65 | None | homomerdihedral | - | |
3cwq | PARA FAMILY CHROMOSOME PARTITIONING PROTEINSynechocystis sp. PCC 6803 | CbiA | ALA A 61ALA A 62ALA B 61ALA B 62 | None | homomercyclic | - | |
3dpi | NAD+ SYNTHETASEBurkholderia pseudomallei | NAD_synthase | ALA A 117ALA A 120ALA B 117ALA B 120 | None | homomerdihedral | - | |
3e0i | 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASEAquifex aeolicus | DAHP_synth_1 | ALA A1210ALA A1213ALA D2210ALA D2213 | None | homomerdihedral | 19228070 | |
3e10 | PUTATIVE NADH OXIDASEClostridium acetobutylicum | Nitroreductase | ALA A 93ALA A 94ALA B 93ALA B 94 | None | homomercyclic | - | |
3ei9 | LL-DIAMINOPIMELATE AMINOTRANSFERASEArabidopsis thaliana | Aminotran_1_2 | ALA A 79ALA A 82ALA B 79ALA B 82 | None | homomercyclic | 18952095 | |
3fa4 | 2,3-DIMETHYLMALATE LYASEAspergillus niger | PEP_mutase | ALA A 247ALA A 250ALA B 247ALA B 250 | None | homomerdihedral | 19133276 | |
3fiu | NH(3)-DEPENDENT NAD(+) SYNTHETASEFrancisella tularensis | NAD_synthase | ALA A 93ALA A 96ALA B 93ALA B 96 | None | homomercyclic | 19204287 | |
3fwy | LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEINRhodobacter sphaeroides | Fer4_NifH | ALA A 122ALA B 192ALA B 193ALA B 196 | None | homomercyclic | 19006326 | |
3hj9 | OXIDOREDUCTASECupriavidus pinatubonensis | Nitroreductase | ALA A 160ALA A 161ALA B 160ALA B 161 | FMN A 300FMN B 300 | homomercyclic | - | |
3hwc | CHLOROPHENOL-4-MONOOXYGENASE COMPONENT 2Burkholderia cepacia | HpaBHpaB_N | ALA A3338ALA A3342ALA C1338ALA C1342 | None | homomerdihedral | 19915006 | |
3jx9 | PUTATIVE PHOSPHOHEPTOSE ISOMERASEExiguobacterium sibiricum | DUF2529 | ALA A 148ALA A 151ALA B 148ALA B 151 | None | homomercyclic | - | |
3kdw | PUTATIVE SUGAR BINDING PROTEINBacteroides vulgatus | DUF3826 | ALA A 102ALA A 106ALA B 102ALA B 106 | None | homomercyclic | - | |
3knb | OBSCURIN-LIKE PROTEIN 1TITINHomo sapiens | I-set | ALA A 10ALA B 98ALA B 99ALA B 100 | None | heteromerasymmetric | 20489725 | |
3lye | OXALOACETATE ACETYL HYDROLASECryphonectria parasitica | PEP_mutase | ALA A 315ALA A 318ALA C 315ALA C 318 | None | homomerdihedral | 20558740 | |
3nvw | XANTHINE DEHYDROGENASE/OXIDASEBos taurus | Ald_Xan_dh_C2Ald_Xan_dh_CFer2Fer2_2 | ALA A 106ALA C 582ALA C 583ALA C 586 | None | heteromercyclic | 24397336 | |
3pde | FARNESYL-DIPHOSPHATE SYNTHASELactobacillus brevis | polyprenyl_synt | ALA A 137ALA A 141ALA B 137ALA B 141 | None | homomercyclic | 23493556 | |
3q4h | PE FAMILY PROTEINMycolicibacterium smegmatis | - | ALA A 20ALA A 23ALA C 20ALA C 23 | None | heteromercyclic | 24312350 | |
3qgu | LL-DIAMINOPIMELATE AMINOTRANSFERASEChlamydomonas reinhardtii | Aminotran_1_2 | ALA A 92ALA A 95ALA B 92ALA B 95 | None | homomercyclic | 21633707 | |
3qke | MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYMEChromohalobacter salexigens | MR_MLE_CMR_MLE_N | ALA A 44ALA A 47ALA B 44ALA B 47 | None | homomercyclic | - | |
3rim | TRANSKETOLASEMycobacterium tuberculosis | Transket_pyrTransketolase_CTransketolase_N | ALA A 511ALA A 514ALA C 511ALA C 514 | None | homomercyclic | 22645655 | |
3s5o | 4-HYDROXY-2-OXOGLUTARATE ALDOLASE, MITOCHONDRIALHomo sapiens | DHDPS | ALA A 229ALA A 232ALA D 229ALA D 232 | None | homomerdihedral | 21998747 | |
3vqj | CARBONYL SULFIDE HYDROLASEThiobacillus thioparus | Pro_CA | ALA A 143ALA A 144ALA B 143ALA B 144 | None | homomerdihedral | 23406161 | |
3zg9 | PENICILLIN-BINDING PROTEIN 4Listeria monocytogenes | TransglyTranspeptidase | ALA A 111ALA B 226ALA B 227ALA B 230 | None | heteromerasymmetric | - | |
4beg | PHOSPHATIDYLETHANOLAMINE BINDING PROTEINMycobacterium tuberculosis | PBP | ALA A 9ALA A 10ALA C 9ALA C 10 | GOL C1177 | homomercyclic | 23907008 | |
4c1k | 2-DEHYDRO-3-DEOXYPHOSPHOHEPTONATE ALDOLASEPyrococcus furiosus | DAHP_synth_1 | ALA A 215ALA A 218ALA B 215ALA B 218 | None | homomerdihedral | 24239948 | |
4ead | THYMIDINE PHOSPHORYLASEEscherichia coli | Glycos_trans_3NGlycos_transf_3PYNP_C | ALA A 40ALA A 41ALA B 40ALA B 41 | None | homomercyclic | - | |
4f0q | RESTRICTION ENDONUCLEASEMycobacterium sp. JLS | Mrr_cat | ALA A 371ALA A 375ALA D 371ALA D 375 | None | homomercyclic | 22848107 | |
4gbu | NADPH DEHYDROGENASE 1Saccharomyces pastorianus | Oxidored_FMN | ALA A 263ALA A 266ALA B 263ALA B 266 | None | homomercyclic | - | |
4giu | ANTHRANILATE PHOSPHORIBOSYLTRANSFERASEMycobacterium tuberculosis | Glycos_trans_3NGlycos_transf_3 | ALA A 60ALA A 63ALA A 64ALA B 63 | None | homomercyclic | 24623674 | |
4hh3 | TRANSCRIPTIONAL REGULATOR, PPSRRhodobacter sphaeroides | PAS_8 | ALA A 22ALA A 23ALA B 22ALA B 23 | None | heteromerasymmetric | 23728293 | |
4izz | TRANSCRIPTION FACTOR HETRFischerella thermalis | Peptidase_S48 | ALA A 24ALA B 45ALA B 46ALA B 49 | None | homomercyclic | 23610410 | |
4lfu | REGULATORY PROTEIN SDIAEscherichia coli | Autoind_bindGerE | ALA A 235ALA A 236ALA B 235ALA B 236 | None | homomercyclic | 24598739 | |
4loc | PYRUVATE CARBOXYLASERhizobium etli | HMGL-likePYC_OADA | ALA A 756ALA A 757ALA B 756ALA B 757 | None | homomerdihedral | 25157442 | |
4lsb | LYASE/MUTASEBurkholderia cenocepacia | PEP_mutase | ALA A 241ALA A 244ALA B 241ALA B 244 | None | homomercyclic | - | |
4mwa | 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASEBacillus anthracis | GcpE | ALA A 219ALA A 220ALA D 219ALA D 220 | None | homomercyclic | - | |
4p6k | COMPUTATIONALLY DESIGNED TRANSPORTER OF ZN(II) AND PROTONsynthetic construct | - | ALA A 12ALA A 15ALA B 12ALA B 15 | None | homomercyclic | 25525248 | |
4q16 | NH(3)-DEPENDENT NAD(+) SYNTHETASEDeinococcus radiodurans | NAD_synthase | ALA A 119ALA A 122ALA B 119ALA B 122 | None | homomercyclic | - | |
4rg1 | C9ORF114Homo sapiens | Methyltrn_RNA_3 | ALA A 362ALA A 363ALA B 362ALA B 363 | None | homomercyclic | - | |
4uwm | 3,6-DIKETOCAMPHANE 1,6 MONOOXYGENASEPseudomonas putida | Bac_luciferase | ALA A 62ALA A 63ALA B 62ALA B 63 | None | homomercyclic | 26527149 | |
4yba | REGULATORY PROTEIN CKlebsiella pneumoniae | HTH_3 | ALA A 16ALA A 19ALA B 16ALA B 19 | None | homomercyclic | - | |
4ybn | FLAVIN-NUCLEOTIDE-BINDING PROTEINMycolicibacterium smegmatis | Pyridox_ox_2 | ALA A 39ALA A 48ALA B 39ALA B 48 | None | homomercyclic | 26434506 | |
5a2d | BETAINE ALDEHYDE DEHYDROGENASE, CHLOROPLASTICSpinacia oleracea | Aldedh | ALA A 245ALA A 248ALA B 245ALA B 248 | None | homomercyclic | 26792760 | |
5awe | PUTATIVE ACETOIN UTILIZATION PROTEIN, ACETOIN DEHYDROGENASEThermus thermophilus | CBS | ALA A 155ALA A 158ALA D 155ALA D 158 | None | homomerdihedral | 26936147 | |
5b0v | MATRIX PROTEIN VP40Marburg marburgvirus | VP40 | ALA A 97ALA A 101ALA B 97ALA B 101 | None | homomercyclic | 26656687 | |
5bnc | HEME BINDING PROTEIN MSMEG_6519Mycolicibacterium smegmatis | DUF2470Pyrid_oxidase_2 | ALA A 47ALA A 57ALA B 47ALA B 57 | None | homomercyclic | 26434506 | |
5dqp | EDTA MONOOXYGENASEEDTA-degrading bacterium BNC1 | Bac_luciferase | ALA A 80ALA A 81ALA B 80ALA B 81 | None | homomercyclic | 26928990 | |
5et3 | FULLERENE ORGANIZING PROTEIN (C60SOL-COP-3)synthetic construct | - | ALA A 10ALA A 13ALA D 17ALA D 20 | 60C A 101 | homomerdihedral | - | |
5exe | OXALATE OXIDOREDUCTASE SUBUNIT ALPHAOXALATE OXIDOREDUCTASE SUBUNIT BETAMoorella thermoacetica | PFOR_IIPOR_N | ALA A 69ALA A 72ALA A 74ALA F 87 | None | heteromercyclic | 26712008 | |
5fmn | INRSSynechocystis sp. PCC 6803 | Trns_repr_metal | ALA A 86ALA A 87ALA D 86ALA D 87 | None | homomerdihedral | 28166209 | |
5jie | PROTEIN DELTAOrsay virus | - | ALA E 13ALA E 16ALA E 17ALA A 11 | None | homomercyclic | 28241071 | |
5m49 | AMINOTRANSFERASE CLASS-IIIRhizobium freirei | Aminotran_3 | ALA A 48ALA A 51ALA A 52ALA B 75 | None | homomercyclic | - | |
5myp | ALDEHYDE DEHYDROGENASETrypanosoma brucei | Aldedh | ALA A 211ALA A 214ALA B 211ALA B 214 | None | homomercyclic | - | |
5odq | HETERODISULFIDE REDUCTASE, SUBUNIT AMethanothermococcus thermolithotrophicus | Fer4_9Pyr_redox_2 | ALA A 552ALA A 556ALA G 552ALA G 556 | None | heteromercyclic | 28818947 | |
5oi0 | UNCHARACTERIZED PROTEINMycolicibacterium hassiacum | - | ALA A 13ALA A 14ALA C 13ALA C 14 | None | homomerdihedral | 31316802 | |
5w4z | RIBOFLAVIN LYASEHerbiconiux | Bac_luciferase | ALA A 94ALA A 95ALA B 94ALA B 95 | None | homomercyclic | - | |
5wgc | DAUNORUBICIN-DOXORUBICIN POLYKETIDE SYNTHASEStreptomyces peucetius | ACP_syn_III_C | ALA A 130ALA A 134ALA B 130ALA B 134 | None | homomercyclic | 29620883 | |
5z9y | THIAZOLE SYNTHASEMycobacterium tuberculosis | ThiG | ALA A 190ALA A 222ALA B 229ALA B 233 | None | homomercyclic | 29428731 | |
6cbl | NEAMINE TRANSAMINASE NEONStreptomyces fradiae | Aminotran_3 | ALA A 65ALA A 68ALA B 65ALA B 68 | None | homomercyclic | 29516565 | |
6h00 | PYRIDOXINE-5'-PHOSPHATE OXIDASEHomo sapiens | PNP_phzG_CPutative_PNPOx | ALA A 84ALA A 94ALA B 84ALA B 94 | None | homomercyclic | - | |