DRUG BINDING INTERFACES MAPPED TO '3v8v'

List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
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DrReposER ID PDB Ligand Organism Macromolecule Pfam Res. Interface HETATM
3V8V_A_SAMA801 3v8v SAM

DB00118
(S-
Adenosylmethionine)
Escherichia coli RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE L
PF01170
(THUMP)
PF02926
(Methyltrans_SAM)
PF10672
(UPF0020)
14 PRO A 172
ILE A 173
MET A 197
GLY A 199
SER A 200
THR A 202
ASP A 262
SER A 263
ASP A 264
ASP A 290
VAL A 291
ASN A 309
PRO A 311
LEU A 325
SAM A 801
3V8V_A_SAMA802 3v8v SAM

DB00118
(S-
Adenosylmethionine)
Escherichia coli RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE L
PF01170
(THUMP)
PF02926
(Methyltrans_SAM)
PF10672
(UPF0020)
9 PHE A 546
TYR A 548
ASP A 568
MET A 569
SER A 570
TYR A 573
ASP A 597
CYS A 598
PRO A 617
SAM A 802
3V8V_B_SAMB801 3v8v SAM

DB00118
(S-
Adenosylmethionine)
Escherichia coli RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE L
None 11 MET B 197
GLY B 199
ASP B 262
SER B 263
ASP B 264
ASP B 290
VAL B 291
ASN B 309
PRO B 311
TYR B 312
LEU B 325
SAM B 801
3V8V_B_SAMB802 3v8v SAM

DB00118
(S-
Adenosylmethionine)
Escherichia coli RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE L
None 13 ARG B 530
PHE B 546
TYR B 548
SER B 551
ASP B 568
MET B 569
SER B 570
TYR B 573
ASP B 597
CYS B 598
ASP B 615
PRO B 617
SER B 620
SAM B 802