DRUG BINDING INTERFACES MAPPED TO 'NVP'
List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
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Only hits with patterns containing 3-12 residues
DrReposER ID
PDB
Ligand
Organism
Macromolecule
Pfam
Res.
Interface
HETATM
1FKP_A_NVPA999
1fkp
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 RT, A-CHAIN
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
11
PRO A 95LEU A 100ASN A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
1JLB_A_NVPA999
1jlb
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 RT A-CHAIN
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
8
LEU A 100VAL A 106CYS A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
1JLF_A_NVPA999
1jlf
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 RT A-CHAIN;HIV-1 RT B-CHAIN
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
8
LEU A 100VAL A 106GLU B 138TYR A 181CYS A 188GLY A 190TRP A 229TYR A 318
NVP A 999
1LW0_A_NVPA999
1lw0
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
10
LEU A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
1LWC_A_NVPA999
1lwc
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
11
PRO A 95LEU A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
1LWE_A_NVPA999
1lwe
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
7
LEU A 100VAL A 106TYR A 181TYR A 188GLY A 190TRP A 229TYR A 318
NVP A 999
1LWF_A_NVPA999
1lwf
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
9
LEU A 100VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
1S1U_A_NVPA999
1s1u
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
10
ILE A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
1S1X_A_NVPA999
1s1x
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
8
LEU A 100VAL A 106TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
1VRT_A_NVPA999
1vrt
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
9
LEU A 100VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
2HND_A_NVPA999
2hnd
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE/RIBONUCLEASE H
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
10
LEU A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
2HNY_A_NVPA999
2hny
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE/RIBONUCLEASE H
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
10
LEU A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 999
3HVT_A_NVPA557
3hvt
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE(SUBUNIT P66)
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
9
LEU A 100LYS A 103VAL A 106TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 319
NVP A 557
3LP0_A_NVPA701
3lp0
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE/RIBONUCLEASE H
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
9
LEU A 100VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 701
3LP1_A_NVPA701
3lp1
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE/RIBONUCLEASE H
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
10
LEU A 100ASN A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 701
3QIP_A_NVPA561
3qip
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSE HIV-1REVERSETRANSCRIPTASE P66
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
10
LEU A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 561
3V81_A_NVPA901
3v81
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE P66SUBUNIT
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
8
LEU A 100LYS A 103VAL A 179TYR A 181TYR A 188TRP A 229LEU A 234TYR A 318
NVP A 901
3V81_C_NVPC901
3v81
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE P66SUBUNIT
no annotation
8
LEU C 100VAL C 106VAL C 179TYR C 181TYR C 188TRP C 229LEU C 234TYR C 318
NVP C 901
4B3Q_A_NVPA999
4b3q
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE/RIBONUCLEASE H
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
7
LEU A 100LYS A 103VAL A 106TYR A 181TYR A 188LEU A 234TYR A 318
NVP A 999
4PUO_A_NVPA901
4puo
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE, P66SUBUNIT
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
9
PRO A 95LEU A 100VAL A 106VAL A 179TYR A 181TYR A 188TRP A 229LEU A 234TYR A 318
NVP A 901
4PUO_C_NVPC901
4puo
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE, P66SUBUNIT
no annotation
8
LEU C 100VAL C 106VAL C 179TYR C 181TYR C 188TRP C 229LEU C 234TYR C 318
NVP C 901
4PWD_A_NVPA901
4pwd
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE, P66SUBUNIT
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
8
PRO A 95LEU A 100VAL A 106VAL A 179TYR A 181TYR A 188TRP A 229LEU A 234
NVP A 901
4PWD_C_NVPC901
4pwd
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE, P66SUBUNIT
no annotation
8
LEU C 100VAL C 106VAL C 179TYR C 181TYR C 188TRP C 229LEU C 234TYR C 318
NVP C 901
4Q0B_A_NVPA901
4q0b
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE, P66SUBUNIT
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
8
LEU A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188TRP A 229LEU A 234
NVP A 901
4Q0B_C_NVPC901
4q0b
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
HIV-1 REVERSETRANSCRIPTASE, P66SUBUNIT
no annotation
9
LEU C 100LYS C 103VAL C 106VAL C 179TYR C 181TYR C 188TRP C 229LEU C 234TYR C 318
NVP C 901
5HBM_A_NVPA601
5hbm
NVP
DB00238(Nevirapine)
Humanimmunodeficiency virus 1
REVERSETRANSCRIPTASE/RIBONUCLEASE H
PF00075(RNase_H)PF00078(RVT_1)PF06815(RVT_connect)PF06817(RVT_thumb)
11
PRO A 95LEU A 100LYS A 103VAL A 106VAL A 179TYR A 181TYR A 188GLY A 190TRP A 229LEU A 234TYR A 318
NVP A 601
[["1FKP_A_NVPA999","1fkp","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 RT, A-CHAIN","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",11,"PRO A 95;LEU A 100;ASN A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["1JLB_A_NVPA999","1jlb","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 RT A-CHAIN","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",8,"LEU A 100;VAL A 106;CYS A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["1JLF_A_NVPA999","1jlf","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 RT A-CHAIN;HIV-1 RT B-CHAIN","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",8,"LEU A 100;VAL A 106;GLU B 138;TYR A 181;CYS A 188;GLY A 190;TRP A 229;TYR A 318","NVP A 999\r"],["1LW0_A_NVPA999","1lw0","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",10,"LEU A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["1LWC_A_NVPA999","1lwc","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",11,"PRO A 95;LEU A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["1LWE_A_NVPA999","1lwe","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",7,"LEU A 100;VAL A 106;TYR A 181;TYR A 188;GLY A 190;TRP A 229;TYR A 318","NVP A 999\r"],["1LWF_A_NVPA999","1lwf","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",9,"LEU A 100;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["1S1U_A_NVPA999","1s1u","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",10,"ILE A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["1S1X_A_NVPA999","1s1x","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",8,"LEU A 100;VAL A 106;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["1VRT_A_NVPA999","1vrt","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",9,"LEU A 100;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["2HND_A_NVPA999","2hnd","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE\/RIBONUCLEASE H","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",10,"LEU A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["2HNY_A_NVPA999","2hny","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE\/RIBONUCLEASE H","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",10,"LEU A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 999\r"],["3HVT_A_NVPA557","3hvt","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",9,"LEU A 100;LYS A 103;VAL A 106;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 319","NVP A 557\r"],["3LP0_A_NVPA701","3lp0","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE\/RIBONUCLEASE H","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",9,"LEU A 100;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 701\r"],["3LP1_A_NVPA701","3lp1","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE\/RIBONUCLEASE H","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",10,"LEU A 100;ASN A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 701\r"],["3QIP_A_NVPA561","3qip","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE HIV-1 REVERSE TRANSCRIPTASE P66","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",10,"LEU A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 561\r"],["3V81_A_NVPA901","3v81","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",8,"LEU A 100;LYS A 103;VAL A 179;TYR A 181;TYR A 188;TRP A 229;LEU A 234;TYR A 318","NVP A 901\r"],["3V81_C_NVPC901","3v81","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT","no annotation",8,"LEU C 100;VAL C 106;VAL C 179;TYR C 181;TYR C 188;TRP C 229;LEU C 234;TYR C 318","NVP C 901\r"],["4B3Q_A_NVPA999","4b3q","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE\/RIBONUCLEASE H","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",7,"LEU A 100;LYS A 103;VAL A 106;TYR A 181;TYR A 188;LEU A 234;TYR A 318","NVP A 999\r"],["4PUO_A_NVPA901","4puo","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",9,"PRO A 95;LEU A 100;VAL A 106;VAL A 179;TYR A 181;TYR A 188;TRP A 229;LEU A 234;TYR A 318","NVP A 901\r"],["4PUO_C_NVPC901","4puo","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT","no annotation",8,"LEU C 100;VAL C 106;VAL C 179;TYR C 181;TYR C 188;TRP C 229;LEU C 234;TYR C 318","NVP C 901\r"],["4PWD_A_NVPA901","4pwd","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",8,"PRO A 95;LEU A 100;VAL A 106;VAL A 179;TYR A 181;TYR A 188;TRP A 229;LEU A 234","NVP A 901\r"],["4PWD_C_NVPC901","4pwd","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT","no annotation",8,"LEU C 100;VAL C 106;VAL C 179;TYR C 181;TYR C 188;TRP C 229;LEU C 234;TYR C 318","NVP C 901\r"],["4Q0B_A_NVPA901","4q0b","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",8,"LEU A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;TRP A 229;LEU A 234","NVP A 901\r"],["4Q0B_C_NVPC901","4q0b","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT","no annotation",9,"LEU C 100;LYS C 103;VAL C 106;VAL C 179;TYR C 181;TYR C 188;TRP C 229;LEU C 234;TYR C 318","NVP C 901\r"],["5HBM_A_NVPA601","5hbm","NVP","DB00238(Nevirapine)","Human immunodeficiency virus 1","REVERSE TRANSCRIPTASE\/RIBONUCLEASE H","PF00075(RNase_H);PF00078(RVT_1);PF06815(RVT_connect);PF06817(RVT_thumb)",11,"PRO A 95;LEU A 100;LYS A 103;VAL A 106;VAL A 179;TYR A 181;TYR A 188;GLY A 190;TRP A 229;LEU A 234;TYR A 318","NVP A 601\r"]]