DRUG BINDING INTERFACES MAPPED TO 'CPF'
List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
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Only hits with patterns containing 3-12 residues
DrReposER ID
PDB
Ligand
Organism
Macromolecule
Pfam
Res.
Interface
HETATM
1T9U_A_CPFA5002
1t9u
CPF
DB00537(Ciprofloxacin)
Escherichiacoli
ACRIFLAVINERESISTANCE PROTEIN B
PF00873(ACR_tran)
6
PHE A 664PHE A 666ASN A 667ARG A 717ASN A 719GLN A 830
CPF A5002
2XCT_G_CPFG1020
2xct
CPF
DB00537(Ciprofloxacin)
Staphylococcusaureus;syntheticconstruct
DNA GYRASE SUBUNITB, DNA GYRASESUBUNIT A
PF00521(DNA_topoisoIV)PF00986(DNA_gyraseB_C)PF01751(Toprim)no annotation
3
ARG B 458GLY B 459SER B1084
CPF G1020
2XCT_H_CPFH1020
2xct
CPF
DB00537(Ciprofloxacin)
Staphylococcusaureus;syntheticconstruct
DNA GYRASE SUBUNITB, DNA GYRASESUBUNIT A
no annotation
3
ARG D 458GLU D 477SER D1084
CPF H1020
2XCT_X_CPFX1020
2xct
CPF
DB00537(Ciprofloxacin)
Staphylococcusaureus;syntheticconstruct
DNA GYRASE SUBUNITB, DNA GYRASESUBUNIT A
no annotation
4
ARG S 458GLY S 459GLU S 477SER U1084
CPF X1020
4BVV_A_CPFA1081
4bvv
CPF
DB00537(Ciprofloxacin)
Homo sapiens
APOLIPOPROTEIN(A)
PF00051(Kringle)
9
HIS A 33SER A 34THR A 35ASP A 55ASP A 57TRP A 62TYR A 64LEU A 71PHE A 72
CPF A1081
4KRA_C_CPFC401
4kra
CPF
DB00537(Ciprofloxacin)
Salmonellaenterica
OUTER MEMBRANEPROTEIN F
no annotation
9
ARG C 20TYR C 36ARG C 60ARG C 77TYR C 112GLU C 116GLY C 120THR C 123ARG C 130
CPF C 401
5BTC_G_CPFG101
5btc
CPF
DB00537(Ciprofloxacin)
Mycobacteriumtuberculosis;syntheticconstruct
DNA GYRASE SUBUNITA;DNA GYRASE SUBUNITB;DNA SUBSTRATE 24-MERTTACGTGCATAGTCATTCATGACC
PF00521(DNA_topoisoIV)no annotation
6
SER C 90ARG A 128ARG D 482GLY D 483THR D 500GLU D 501
CPF G 101
5BTC_G_CPFG102
5btc
CPF
DB00537(Ciprofloxacin)
Mycobacteriumtuberculosis;syntheticconstruct
DNA GYRASE SUBUNITA;DNA GYRASE SUBUNITB;DNA SUBSTRATE 24-MERTTACGTGCATAGTCATTCATGACC
PF00521(DNA_topoisoIV)PF00986(DNA_gyraseB_C)PF01751(Toprim)no annotation
6
SER A 90ARG C 128ARG B 482GLY B 483THR B 500GLU B 501
CPF G 102
[["1T9U_A_CPFA5002","1t9u","CPF","DB00537(Ciprofloxacin)","Escherichia coli","ACRIFLAVINE RESISTANCE PROTEIN B","PF00873(ACR_tran)",6,"PHE A 664;PHE A 666;ASN A 667;ARG A 717;ASN A 719;GLN A 830","CPF A5002\r"],["2XCT_G_CPFG1020","2xct","CPF","DB00537(Ciprofloxacin)","Staphylococcus aureus;synthetic construct","DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A","PF00521(DNA_topoisoIV);PF00986(DNA_gyraseB_C);PF01751(Toprim);no annotation",3,"ARG B 458;GLY B 459;SER B1084","CPF G1020\r"],["2XCT_H_CPFH1020","2xct","CPF","DB00537(Ciprofloxacin)","Staphylococcus aureus;synthetic construct","DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A","no annotation",3,"ARG D 458;GLU D 477;SER D1084","CPF H1020\r"],["2XCT_X_CPFX1020","2xct","CPF","DB00537(Ciprofloxacin)","Staphylococcus aureus;synthetic construct","DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A","no annotation",4,"ARG S 458;GLY S 459;GLU S 477;SER U1084","CPF X1020\r"],["4BVV_A_CPFA1081","4bvv","CPF","DB00537(Ciprofloxacin)","Homo sapiens","APOLIPOPROTEIN(A)","PF00051(Kringle)",9,"HIS A 33;SER A 34;THR A 35;ASP A 55;ASP A 57;TRP A 62;TYR A 64;LEU A 71;PHE A 72","CPF A1081\r"],["4KRA_C_CPFC401","4kra","CPF","DB00537(Ciprofloxacin)","Salmonella enterica","OUTER MEMBRANE PROTEIN F","no annotation",9,"ARG C 20;TYR C 36;ARG C 60;ARG C 77;TYR C 112;GLU C 116;GLY C 120;THR C 123;ARG C 130","CPF C 401\r"],["5BTC_G_CPFG101","5btc","CPF","DB00537(Ciprofloxacin)","Mycobacterium tuberculosis;synthetic construct","DNA GYRASE SUBUNIT A;DNA GYRASE SUBUNIT B;DNA SUBSTRATE 24-MER TTACGTGCATAGTCATTCATGACC","PF00521(DNA_topoisoIV);no annotation",6,"SER C 90;ARG A 128;ARG D 482;GLY D 483;THR D 500;GLU D 501","CPF G 101\r"],["5BTC_G_CPFG102","5btc","CPF","DB00537(Ciprofloxacin)","Mycobacterium tuberculosis;synthetic construct","DNA GYRASE SUBUNIT A;DNA GYRASE SUBUNIT B;DNA SUBSTRATE 24-MER TTACGTGCATAGTCATTCATGACC","PF00521(DNA_topoisoIV);PF00986(DNA_gyraseB_C);PF01751(Toprim);no annotation",6,"SER A 90;ARG C 128;ARG B 482;GLY B 483;THR B 500;GLU B 501","CPF G 102\r"]]