DRUG BINDING INTERFACES MAPPED TO 'Rhodobacter sphaeroides'
List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
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Only hits with patterns containing 3-12 residues
DrReposER ID
PDB
Ligand
Organism
Macromolecule
Pfam
Res.
Interface
HETATM
1NW5_A_SAMA401
1nw5
SAM
DB00118(S-Adenosylmethionine)
Rhodobactersphaeroides
MODIFICATIONMETHYLASE RSRI
PF01555(N6_N4_Mtase)
15
ASP A 46CYS A 47ASP A 65PRO A 67TRP A 84HIS A 223THR A 225LYS A 227PHE A 250GLY A 252SER A 253VAL A 255ASP A 271ALA A 272ALA A 273
SAM A 401
3DTU_A_CUA1023
3dtu
CU
DB09130(Copper)
Rhodobactersphaeroides
CYTOCHROME C OXIDASESUBUNIT 1
PF00115(COX1)
3
HIS A 284HIS A 333HIS A 334
CU A1023
3DTU_B_CUB1004
3dtu
CU
DB09130(Copper)
Rhodobactersphaeroides
CYTOCHROME C OXIDASESUBUNIT 2
PF00116(COX2_TM)PF02790(COX2)
4
HIS B 217CYS B 252CYS B 256MET B 263
CU B1004
3DTU_B_CUB1022
3dtu
CU
DB09130(Copper)
Rhodobactersphaeroides
CYTOCHROME C OXIDASESUBUNIT 2
PF00116(COX2_TM)PF02790(COX2)
3
CYS B 252CYS B 256HIS B 260
CU B1022
3DTU_C_CUC569
3dtu
CU
DB09130(Copper)
Rhodobactersphaeroides
CYTOCHROME C OXIDASESUBUNIT 1
None
3
HIS C 284HIS C 333HIS C 334
CU C 569
3DTU_C_DXCC576
3dtu
DXC
DB03619(DeoxycholicAcid)
Rhodobactersphaeroides
CYTOCHROME C OXIDASESUBUNIT 1;CYTOCHROME C OXIDASESUBUNIT 2
None
8
HIS D 96GLU D 101THR D 105PRO C 315ALA C 319ALA C 322PRO C 358ILE C 361
DXC C 576
3DTU_D_CUD3
3dtu
CU
DB09130(Copper)
Rhodobactersphaeroides
CYTOCHROME C OXIDASESUBUNIT 2
None
3
CYS D 252CYS D 256HIS D 260
CU D 3
3DTU_D_CUD4
3dtu
CU
DB09130(Copper)
Rhodobactersphaeroides
CYTOCHROME C OXIDASESUBUNIT 2
None
4
HIS D 217CYS D 252CYS D 256MET D 263
CU D 4
3IV6_A_SAMA301
3iv6
SAM
DB00118(S-Adenosylmethionine)
Rhodobactersphaeroides
PUTATIVEZN-DEPENDENT ALCOHOLDEHYDROGENASE
None
15
ASN A 5TRP A 11PHE A 18PRO A 28GLY A 50SER A 52THR A 53ASP A 71PHE A 72SER A 73ASP A 95ILE A 96THR A 97ASP A 114LEU A 116
SAM A 301
3IV6_B_SAMB301
3iv6
SAM
DB00118(S-Adenosylmethionine)
Rhodobactersphaeroides
PUTATIVEZN-DEPENDENT ALCOHOLDEHYDROGENASE
None
12
TRP B 11PHE B 18GLY B 50SER B 52THR B 53ASP B 71PHE B 72ASP B 95ILE B 96ASP B 114LEU B 116ARG B 119
SAM B 301
3IV6_C_SAMC301
3iv6
SAM
DB00118(S-Adenosylmethionine)
Rhodobactersphaeroides
PUTATIVEZN-DEPENDENT ALCOHOLDEHYDROGENASE
None
15
TRP C 11PHE C 18ARG C 27PRO C 28GLY C 50SER C 52THR C 53ASP C 71PHE C 72SER C 73ASP C 95ILE C 96ASP C 114ARG C 115LEU C 116
SAM C 301
3IV6_D_SAMD301
3iv6
SAM
DB00118(S-Adenosylmethionine)
Rhodobactersphaeroides
PUTATIVEZN-DEPENDENT ALCOHOLDEHYDROGENASE
None
14
TRP D 11PHE D 18GLY D 50SER D 52THR D 53ASP D 71PHE D 72SER D 73ASP D 95ILE D 96ASP D 114ARG D 115LEU D 116ARG D 119
SAM D 301
5KKZ_A_ASCA1004
5kkz
ASC
DB00126(VitaminC)
Rhodobactersphaeroides
CYTOCHROME B;UBIQUINOL-CYTOCHROMEC REDUCTASEIRON-SULFUR SUBUNIT
NonePF00032(Cytochrom_B_C)PF00033(Cytochrome_B)
6
HIS G 152HIS A 291VAL A 293TYR A 302ARG A 306GLN A 384
ASC A1004
5KKZ_E_ASCE1004
5kkz
ASC
DB00126(VitaminC)
Rhodobactersphaeroides
CYTOCHROME B;UBIQUINOL-CYTOCHROMEC REDUCTASEIRON-SULFUR SUBUNIT
NonePF00355(UCR_Fe-S_N)PF10399(Rieske)
7
HIS C 152HIS E 291ILE E 292VAL E 293TYR E 302ARG E 306GLN E 384
ASC E1004
5KKZ_K_ASCK1004
5kkz
ASC
DB00126(VitaminC)
Rhodobactersphaeroides
CYTOCHROME B;UBIQUINOL-CYTOCHROMEC REDUCTASEIRON-SULFUR SUBUNIT
None
7
HIS Q 152HIS K 291ILE K 292VAL K 293TYR K 302ARG K 306GLN K 384
ASC K1004
5KKZ_O_ASCO1004
5kkz
ASC
DB00126(VitaminC)
Rhodobactersphaeroides
CYTOCHROME B;UBIQUINOL-CYTOCHROMEC REDUCTASEIRON-SULFUR SUBUNIT
None
7
HIS M 152HIS O 291ILE O 292VAL O 293TYR O 302ARG O 306GLN O 384
ASC O1004
6D8A_F_ACTF803
6d8a
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
None
4
MET F 528TYR F 571ARG F 606LEU F 608
ACT F 803
6D8F_A_ACTA803
6d8f
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
PF02171(Piwi)
3
GLU A 377LEU A 380ARG A 384
ACT A 803
6D8P_A_ACTA810
6d8p
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
PF02171(Piwi)
6
HIS A 516TYR A 557TYR A 717GLU A 720GLN A 721LYS A 724
ACT A 810
6D8P_A_ACTA814
6d8p
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
PF02171(Piwi)
5
TYR A 494GLN A 497ASN A 498THR A 733LEU A 734
ACT A 814
6D8P_A_ACTA816
6d8p
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
PF02171(Piwi)
3
ARG A 322ARG A 681ASP A 716
ACT A 816
6D8P_B_ACTB803
6d8p
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
None
4
MET B 528TYR B 571ARG B 606LEU B 608
ACT B 803
6D8P_B_ACTB804
6d8p
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
None
4
HIS B 639VAL B 685LEU B 702ALA B 737
ACT B 804
6D9K_F_ACTF802
6d9k
ACT
DB03166(Aceticacid)
Rhodobactersphaeroides
UNCHARACTERIZEDPROTEIN
None
3
TYR F 571ALA F 604LEU F 608
ACT F 802
[["1NW5_A_SAMA401","1nw5","SAM","DB00118(S-Adenosylmethionine)","Rhodobacter sphaeroides","MODIFICATION METHYLASE RSRI","PF01555(N6_N4_Mtase)",15,"ASP A 46;CYS A 47;ASP A 65;PRO A 67;TRP A 84;HIS A 223;THR A 225;LYS A 227;PHE A 250;GLY A 252;SER A 253;VAL A 255;ASP A 271;ALA A 272;ALA A 273","SAM A 401\r"],["3DTU_A_CUA1023","3dtu","CU","DB09130(Copper)","Rhodobacter sphaeroides","CYTOCHROME C OXIDASE SUBUNIT 1","PF00115(COX1)",3,"HIS A 284;HIS A 333;HIS A 334"," CU A1023\r"],["3DTU_B_CUB1004","3dtu","CU","DB09130(Copper)","Rhodobacter sphaeroides","CYTOCHROME C OXIDASE SUBUNIT 2","PF00116(COX2_TM);PF02790(COX2)",4,"HIS B 217;CYS B 252;CYS B 256;MET B 263"," CU B1004\r"],["3DTU_B_CUB1022","3dtu","CU","DB09130(Copper)","Rhodobacter sphaeroides","CYTOCHROME C OXIDASE SUBUNIT 2","PF00116(COX2_TM);PF02790(COX2)",3,"CYS B 252;CYS B 256;HIS B 260"," CU B1022\r"],["3DTU_C_CUC569","3dtu","CU","DB09130(Copper)","Rhodobacter sphaeroides","CYTOCHROME C OXIDASE SUBUNIT 1","None",3,"HIS C 284;HIS C 333;HIS C 334"," CU C 569\r"],["3DTU_C_DXCC576","3dtu","DXC","DB03619(Deoxycholic Acid)","Rhodobacter sphaeroides","CYTOCHROME C OXIDASE SUBUNIT 1;CYTOCHROME C OXIDASE SUBUNIT 2","None",8,"HIS D 96;GLU D 101;THR D 105;PRO C 315;ALA C 319;ALA C 322;PRO C 358;ILE C 361","DXC C 576\r"],["3DTU_D_CUD3","3dtu","CU","DB09130(Copper)","Rhodobacter sphaeroides","CYTOCHROME C OXIDASE SUBUNIT 2","None",3,"CYS D 252;CYS D 256;HIS D 260"," CU D 3\r"],["3DTU_D_CUD4","3dtu","CU","DB09130(Copper)","Rhodobacter sphaeroides","CYTOCHROME C OXIDASE SUBUNIT 2","None",4,"HIS D 217;CYS D 252;CYS D 256;MET D 263"," CU D 4\r"],["3IV6_A_SAMA301","3iv6","SAM","DB00118(S-Adenosylmethionine)","Rhodobacter sphaeroides","PUTATIVE ZN-DEPENDENT ALCOHOL DEHYDROGENASE","None",15,"ASN A 5;TRP A 11;PHE A 18;PRO A 28;GLY A 50;SER A 52;THR A 53;ASP A 71;PHE A 72;SER A 73;ASP A 95;ILE A 96;THR A 97;ASP A 114;LEU A 116","SAM A 301\r"],["3IV6_B_SAMB301","3iv6","SAM","DB00118(S-Adenosylmethionine)","Rhodobacter sphaeroides","PUTATIVE ZN-DEPENDENT ALCOHOL DEHYDROGENASE","None",12,"TRP B 11;PHE B 18;GLY B 50;SER B 52;THR B 53;ASP B 71;PHE B 72;ASP B 95;ILE B 96;ASP B 114;LEU B 116;ARG B 119","SAM B 301\r"],["3IV6_C_SAMC301","3iv6","SAM","DB00118(S-Adenosylmethionine)","Rhodobacter sphaeroides","PUTATIVE ZN-DEPENDENT ALCOHOL DEHYDROGENASE","None",15,"TRP C 11;PHE C 18;ARG C 27;PRO C 28;GLY C 50;SER C 52;THR C 53;ASP C 71;PHE C 72;SER C 73;ASP C 95;ILE C 96;ASP C 114;ARG C 115;LEU C 116","SAM C 301\r"],["3IV6_D_SAMD301","3iv6","SAM","DB00118(S-Adenosylmethionine)","Rhodobacter sphaeroides","PUTATIVE ZN-DEPENDENT ALCOHOL DEHYDROGENASE","None",14,"TRP D 11;PHE D 18;GLY D 50;SER D 52;THR D 53;ASP D 71;PHE D 72;SER D 73;ASP D 95;ILE D 96;ASP D 114;ARG D 115;LEU D 116;ARG D 119","SAM D 301\r"],["5KKZ_A_ASCA1004","5kkz","ASC","DB00126(Vitamin C)","Rhodobacter sphaeroides","CYTOCHROME B;UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT","None;PF00032(Cytochrom_B_C);PF00033(Cytochrome_B)",6,"HIS G 152;HIS A 291;VAL A 293;TYR A 302;ARG A 306;GLN A 384","ASC A1004\r"],["5KKZ_E_ASCE1004","5kkz","ASC","DB00126(Vitamin C)","Rhodobacter sphaeroides","CYTOCHROME B;UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT","None;PF00355(UCR_Fe-S_N);PF10399(Rieske)",7,"HIS C 152;HIS E 291;ILE E 292;VAL E 293;TYR E 302;ARG E 306;GLN E 384","ASC E1004\r"],["5KKZ_K_ASCK1004","5kkz","ASC","DB00126(Vitamin C)","Rhodobacter sphaeroides","CYTOCHROME B;UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT","None",7,"HIS Q 152;HIS K 291;ILE K 292;VAL K 293;TYR K 302;ARG K 306;GLN K 384","ASC K1004\r"],["5KKZ_O_ASCO1004","5kkz","ASC","DB00126(Vitamin C)","Rhodobacter sphaeroides","CYTOCHROME B;UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT","None",7,"HIS M 152;HIS O 291;ILE O 292;VAL O 293;TYR O 302;ARG O 306;GLN O 384","ASC O1004\r"],["6D8A_F_ACTF803","6d8a","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","None",4,"MET F 528;TYR F 571;ARG F 606;LEU F 608","ACT F 803\r"],["6D8F_A_ACTA803","6d8f","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","PF02171(Piwi)",3,"GLU A 377;LEU A 380;ARG A 384","ACT A 803\r"],["6D8P_A_ACTA810","6d8p","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","PF02171(Piwi)",6,"HIS A 516;TYR A 557;TYR A 717;GLU A 720;GLN A 721;LYS A 724","ACT A 810\r"],["6D8P_A_ACTA814","6d8p","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","PF02171(Piwi)",5,"TYR A 494;GLN A 497;ASN A 498;THR A 733;LEU A 734","ACT A 814\r"],["6D8P_A_ACTA816","6d8p","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","PF02171(Piwi)",3,"ARG A 322;ARG A 681;ASP A 716","ACT A 816\r"],["6D8P_B_ACTB803","6d8p","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","None",4,"MET B 528;TYR B 571;ARG B 606;LEU B 608","ACT B 803\r"],["6D8P_B_ACTB804","6d8p","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","None",4,"HIS B 639;VAL B 685;LEU B 702;ALA B 737","ACT B 804\r"],["6D9K_F_ACTF802","6d9k","ACT","DB03166(Acetic acid)","Rhodobacter sphaeroides","UNCHARACTERIZED PROTEIN","None",3,"TYR F 571;ALA F 604;LEU F 608","ACT F 802\r"]]