DRUG BINDING INTERFACES MAPPED TO 'RETROPEPSIN'
List of Binding Interfaces (Click on the entry ID to view details of interfaces and pattern clusters) (Note that ASSAM search use only 3-12 residue containing patterns)DrReposER ID | PDB | Ligand | Organism | Macromolecule | Pfam | Res. | Interface | HETATM |
---|---|---|---|---|---|---|---|---|
1RL8_A_RITA9001 | 1rl8 | RIT DB00503(Ritonavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 24 | ARG B 8ARG A 8LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASP B 30ASP A 30VAL A 32GLY A 49GLY B 49ILE B 50ILE A 50PRO B 81PRO A 81ALA B 82ALA A 82ILE A 84ILE B 84 | RIT A9001 |
1SDT_B_MK1B902 | 1sdt | MK1 DB00224(Indinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 22 | ARG A 8LEU A 23ASP A 25ILE A 47GLY A 48GLY A 49ILE A 50PRO A 81VAL A 82ILE A 84ASP B 125GLY B 127ALA B 128ASP B 129ASP B 130VAL B 132ILE B 147GLY B 149ILE B 150PRO B 181VAL B 182ILE B 184 | MK1 B 902 |
1SDU_B_MK1B902 | 1sdu | MK1 DB00224(Indinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 24 | ARG A 8LEU A 23ASP A 25ALA A 28ILE A 47GLY A 48GLY A 49ILE A 50PRO A 81VAL A 82ILE A 84ARG B 108ASP B 125GLY B 127ALA B 128ASP B 129ASP B 130VAL B 132ILE B 147GLY B 149ILE B 150PRO B 181VAL B 182ILE B 184 | MK1 B 902 |
1SDV_B_MK1B902 | 1sdv | MK1 DB00224(Indinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 21 | ARG A 8LEU A 23ASP A 25ALA A 28ILE A 47GLY A 48GLY A 49ILE A 50PRO A 81ILE A 84ASP B 125GLY B 127ALA B 128ASP B 129ASP B 130VAL B 132ILE B 147GLY B 149ILE B 150PRO B 181ILE B 184 | MK1 B 902 |
1T3R_A_017A1200 | 1t3r | 017 DB01264(Darunavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 21 | ARG B 8LEU B 23LEU A 23ASP B 25ASP A 25GLY A 27ALA B 28ALA A 28ASP A 29ASP A 30ASP B 30VAL B 32ILE A 47GLY B 49GLY A 49ILE B 50ILE A 50PRO B 81VAL A 82VAL B 82ILE B 84 | 017 A1200 |
2PYM_A_1UNA1001 | 2pym | 1UN DB00220(Nelfinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 29 | ARG B 8ARG A 8LEU A 23LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASN A 30ASN B 30VAL B 32VAL A 32ILE B 47GLY A 49GLY B 49ILE B 50ILE A 50THR A 80THR B 80PRO B 81PRO A 81VAL A 82VAL B 82ILE A 84ILE B 84 | 1UN A1001 |
2PYN_A_1UNA1001 | 2pyn | 1UN DB00220(Nelfinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 29 | ARG B 8LEU A 23LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASN A 30ASN B 30VAL B 32VAL A 32ILE A 47ILE B 47GLY A 49GLY B 49ILE B 50ILE A 50THR A 80THR B 80PRO A 81PRO B 81VAL A 82VAL B 82ILE A 84ILE B 84 | 1UN A1001 |
2Q63_A_1UNA1001 | 2q63 | 1UN DB00220(Nelfinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 30 | ARG B 8ARG A 8LEU A 23LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASN A 30ASN B 30VAL B 32VAL A 32ILE A 47ILE B 47GLY A 49GLY B 49ILE B 50ILE A 50THR A 80THR B 80PRO A 81PRO B 81VAL A 82VAL B 82ILE A 84ILE B 84 | 1UN A1001 |
2Q64_B_1UNB1001 | 2q64 | 1UN DB00220(Nelfinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 30 | ARG B 8ARG A 8LEU A 23LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASN A 30ASN B 30VAL B 32VAL A 32ILE A 47ILE B 47GLY A 49GLY B 49ILE B 50ILE A 50THR A 80THR B 80PRO A 81PRO B 81VAL A 82VAL B 82ILE A 84ILE B 84 | 1UN B1001 |
2QAK_A_1UNA1001 | 2qak | 1UN DB00220(Nelfinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 30 | ARG B 8ARG A 8LEU A 23LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASN A 30ASN B 30VAL B 32VAL A 32ILE A 47ILE B 47GLY A 49GLY B 49ILE B 50ILE A 50THR A 80THR B 80PRO A 81PRO B 81VAL A 82VAL B 82ILE A 84ILE B 84 | 1UN A1001 |
2QHC_B_AB1B9001 | 2qhc | AB1 DB01601(Lopinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 23 | ARG B 8ARG A 8ASP A 25ASP B 25GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASP B 30ASP A 30VAL B 32VAL A 32GLY A 49GLY B 49ILE B 50ILE A 50PRO B 81PRO A 81VAL A 82VAL B 82ILE A 84ILE B 84 | AB1 B9001 |
2RKF_A_AB1A501 | 2rkf | AB1 DB01601(Lopinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 25 | ARG A 8LEU A 23LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASP B 30ASP A 30ILE B 32ILE A 32GLY A 49GLY B 49ILE B 50ILE A 50PRO B 81PRO A 81ALA B 82ALA A 82ILE A 84ILE B 84 | AB1 A 501 |
2RKG_B_AB1B501 | 2rkg | AB1 DB01601(Lopinavir) | Humanimmunodeficiencyvirus 1 | PROTEASE RETROPEPSIN | PF00077(RVP)no annotation | 24 | LEU A 23LEU B 23ASP A 25ASP B 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASP B 30ASP A 30ILE B 32ILE A 32VAL A 48VAL B 48GLY A 50GLY B 50ILE B 51ILE A 51PRO B 82PRO A 82ILE A 85ILE B 85 | AB1 B 501 |
3BVB_B_017B401 | 3bvb | 017 DB01264(Darunavir) | Humanimmunodeficiencyvirus 1 | PROTEASE(RETROPEPSIN) | PF00077(RVP)no annotation | 26 | ARG A 8LEU A 23LEU B 23ASN B 25ASN A 25GLY A 27GLY B 27ALA B 28ALA A 28ASP A 29ASP B 29ASP B 30ASP A 30VAL B 32VAL A 32ILE A 47GLY A 49GLY B 49ILE B 50ILE A 50PRO A 81PRO B 81VAL A 82VAL B 82ILE A 84ILE B 84 | 017 B 401 |