DRUG BINDING INTERFACES MAPPED TO 'CAPSID'
List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
Filter list by:
All hits
Sort hits by ligand
Sort hits by residue numbers
Only hits with patterns containing 3-12 residues
DrReposER ID
PDB
Ligand
Organism
Macromolecule
Pfam
Res.
Interface
HETATM
2PXC_A_SAMA500
2pxc
SAM
DB00118(S-Adenosylmethionine)
Murray Valleyencephalitisvirus
GENOME POLYPROTEIN[CONTAINS: CAPSIDPROTEIN C (COREPROTEIN); ENVELOPE PROTEIN M(MATRIX PROTEIN); MAJOR ENVELOPEPROTEIN E; NON-STRUCTURALPROTEIN 1 (NS1); NON-STRUCTURALPROTEIN 2A (NS2A); FLAVIVIRIN PROTEASENS2B REGULATORYSUBUNIT; FLAVIVIRIN PROTEASENS3 CATALYTICSUBUNIT; NON-STRUCTURALPROTEIN 4A (NS4A); NON-STRUCTURALPROTEIN 4B (NS4B); RNA-DIRECTED RNAPOLYMERASE (EC2.7.7.48) (NS5)]
PF01728(FtsJ)
14
SER A 56GLY A 58GLY A 81GLY A 83GLY A 86TRP A 87THR A 104LYS A 105HIS A 110GLU A 111ASP A 131VAL A 132ASP A 146ILE A 147
SAM A 500
4J4V_A_SVRA301
4j4v
SVR
DB04786(Suramin)
SFTS phlebovirus
NUCLEOCAPSID PROTEIN
PF05733(Tenui_N)
11
GLY A 65ASN A 66LYS A 67ARG A 95ALA A 96VAL A 105GLN A 109PRO A 127MET A 147PHE A 177ILE A 181
SVR A 301
4J4V_B_SVRB301
4j4v
SVR
DB04786(Suramin)
SFTS phlebovirus
NUCLEOCAPSID PROTEIN
no annotation
10
GLY B 65ASN B 66LYS B 67ARG B 95ALA B 96VAL B 105GLN B 109PRO B 127MET B 147PHE B 177
SVR B 301
4J4V_C_SVRC301
4j4v
SVR
DB04786(Suramin)
SFTS phlebovirus
NUCLEOCAPSID PROTEIN
no annotation
8
GLY C 65ASN C 66LYS C 67ARG C 95PRO C 127MET C 147PHE C 177ILE C 181
SVR C 301
4J4V_D_SVRD301
4j4v
SVR
DB04786(Suramin)
SFTS phlebovirus
NUCLEOCAPSID PROTEIN
no annotation
11
GLY D 65ASN D 66LYS E 74ARG D 95ALA D 96VAL D 105GLN D 109PRO D 127MET D 147PHE D 177ILE D 181
SVR D 301
4J4V_E_SVRE301
4j4v
SVR
DB04786(Suramin)
SFTS phlebovirus
NUCLEOCAPSID PROTEIN
PF05733(Tenui_N)no annotation
10
GLY E 65ASN E 66LYS A 74ARG E 95ALA E 96VAL E 105GLN E 109PRO E 127MET E 147PHE E 177
SVR E 301
5G4B_A_PZEA1268
5g4b
PZE
DB00592(Piperazine)
Aura virus
CAPSID PROTEIN
PF00944(Peptidase_S3)
5
MET A 135GLU A 136LYS A 138TYR A 183TRP A 250
PZE A1268
[["2PXC_A_SAMA500","2pxc","SAM","DB00118(S-Adenosylmethionine)","Murray Valley encephalitis virus","GENOME POLYPROTEIN [CONTAINS: CAPSID PROTEIN C (CORE PROTEIN); ENVELOPE PROTEIN M (MATRIX PROTEIN); MAJOR ENVELOPE PROTEIN E; NON-STRUCTURAL PROTEIN 1 (NS1); NON-STRUCTURAL PROTEIN 2A (NS2A); FLAVIVIRIN PROTEASE NS2B REGULATORY SUBUNIT; FLAVIVIRIN PROTEASE NS3 CATALYTIC SUBUNIT; NON-STRUCTURAL PROTEIN 4A (NS4A); NON-STRUCTURAL PROTEIN 4B (NS4B); RNA-DIRECTED RNA POLYMERASE (EC 2.7.7.48) (NS5)]","PF01728(FtsJ)",14,"SER A 56;GLY A 58;GLY A 81;GLY A 83;GLY A 86;TRP A 87;THR A 104;LYS A 105;HIS A 110;GLU A 111;ASP A 131;VAL A 132;ASP A 146;ILE A 147","SAM A 500\r"],["4J4V_A_SVRA301","4j4v","SVR","DB04786(Suramin)","SFTS phlebovirus","NUCLEOCAPSID PROTEIN","PF05733(Tenui_N)",11,"GLY A 65;ASN A 66;LYS A 67;ARG A 95;ALA A 96;VAL A 105;GLN A 109;PRO A 127;MET A 147;PHE A 177;ILE A 181","SVR A 301\r"],["4J4V_B_SVRB301","4j4v","SVR","DB04786(Suramin)","SFTS phlebovirus","NUCLEOCAPSID PROTEIN","no annotation",10,"GLY B 65;ASN B 66;LYS B 67;ARG B 95;ALA B 96;VAL B 105;GLN B 109;PRO B 127;MET B 147;PHE B 177","SVR B 301\r"],["4J4V_C_SVRC301","4j4v","SVR","DB04786(Suramin)","SFTS phlebovirus","NUCLEOCAPSID PROTEIN","no annotation",8,"GLY C 65;ASN C 66;LYS C 67;ARG C 95;PRO C 127;MET C 147;PHE C 177;ILE C 181","SVR C 301\r"],["4J4V_D_SVRD301","4j4v","SVR","DB04786(Suramin)","SFTS phlebovirus","NUCLEOCAPSID PROTEIN","no annotation",11,"GLY D 65;ASN D 66;LYS E 74;ARG D 95;ALA D 96;VAL D 105;GLN D 109;PRO D 127;MET D 147;PHE D 177;ILE D 181","SVR D 301\r"],["4J4V_E_SVRE301","4j4v","SVR","DB04786(Suramin)","SFTS phlebovirus","NUCLEOCAPSID PROTEIN","PF05733(Tenui_N);no annotation",10,"GLY E 65;ASN E 66;LYS A 74;ARG E 95;ALA E 96;VAL E 105;GLN E 109;PRO E 127;MET E 147;PHE E 177","SVR E 301\r"],["5G4B_A_PZEA1268","5g4b","PZE","DB00592(Piperazine)","Aura virus","CAPSID PROTEIN","PF00944(Peptidase_S3)",5,"MET A 135;GLU A 136;LYS A 138;TYR A 183;TRP A 250","PZE A1268\r"]]