DRUG BINDING INTERFACES MAPPED TO '25S RIBOSOMAL RNA'
List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
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Only hits with patterns containing 3-12 residues
DrReposER ID
PDB
Ligand
Organism
Macromolecule
Pfam
Res.
Interface
HETATM
5NDV_1_PAR13407
5ndv
PAR
DB01421(Paromomycin)
;Saccharomycescerevisiae
;25S RIBOSOMAL RNA
no annotation
4
ASNQ0 119GLUM0 150ARGM0 153ARGM0 154
PAR 13407
5NDV_1_PAR13413
5ndv
PAR
DB01421(Paromomycin)
Saccharomycescerevisiae
25S RIBOSOMAL RNA;5S RIBOSOMAL RNA
no annotation
3
LYSL7 121GLUL7 125LYSL7 128
PAR 13413
5NDV_1_PAR13415
5ndv
PAR
DB01421(Paromomycin)
Saccharomycescerevisiae
18S RIBOSOMAL RNA;25S RIBOSOMAL RNA
no annotation
3
GLNL2 24LYSL2 60ILEL2 75
PAR 13415
5NDV_1_PAR13424
5ndv
PAR
DB01421(Paromomycin)
;Saccharomycescerevisiae
;18S RIBOSOMAL RNA;25S RIBOSOMAL RNA
no annotation
3
ARGM9 64SERN2 72LYSN2 74
PAR 13424
5NDV_5_PAR53404
5ndv
PAR
DB01421(Paromomycin)
;Saccharomycescerevisiae
;18S RIBOSOMAL RNA;25S RIBOSOMAL RNA
no annotation
3
ARGm9 64SERn2 72LYSn2 74
PAR 53404
5NDV_5_PAR53423
5ndv
PAR
DB01421(Paromomycin)
Saccharomycescerevisiae
25S RIBOSOMAL RNA;5.8S RIBOSOMAL RNA
no annotation
3
LYSn8 63THRm8 168ARGm8 174
PAR 53423
5OBM_1_LLL13998
5obm
LLL
DB04729(GENTAMICINC1A)
Saccharomycescerevisiae
25S RIBOSOMAL RNA
no annotation
3
TYRN5 46SERN5 48LYSO5 78
LLL 13998
[["5NDV_1_PAR13407","5ndv","PAR","DB01421(Paromomycin)",";Saccharomyces cerevisiae",";25S RIBOSOMAL RNA","no annotation",4,"ASNQ0 119;GLUM0 150;ARGM0 153;ARGM0 154","PAR 13407\r"],["5NDV_1_PAR13413","5ndv","PAR","DB01421(Paromomycin)","Saccharomyces cerevisiae","25S RIBOSOMAL RNA;5S RIBOSOMAL RNA","no annotation",3,"LYSL7 121;GLUL7 125;LYSL7 128","PAR 13413\r"],["5NDV_1_PAR13415","5ndv","PAR","DB01421(Paromomycin)","Saccharomyces cerevisiae","18S RIBOSOMAL RNA;25S RIBOSOMAL RNA","no annotation",3,"GLNL2 24;LYSL2 60;ILEL2 75","PAR 13415\r"],["5NDV_1_PAR13424","5ndv","PAR","DB01421(Paromomycin)",";Saccharomyces cerevisiae",";18S RIBOSOMAL RNA;25S RIBOSOMAL RNA","no annotation",3,"ARGM9 64;SERN2 72;LYSN2 74","PAR 13424\r"],["5NDV_5_PAR53404","5ndv","PAR","DB01421(Paromomycin)",";Saccharomyces cerevisiae",";18S RIBOSOMAL RNA;25S RIBOSOMAL RNA","no annotation",3,"ARGm9 64;SERn2 72;LYSn2 74","PAR 53404\r"],["5NDV_5_PAR53423","5ndv","PAR","DB01421(Paromomycin)","Saccharomyces cerevisiae","25S RIBOSOMAL RNA;5.8S RIBOSOMAL RNA","no annotation",3,"LYSn8 63;THRm8 168;ARGm8 174","PAR 53423\r"],["5OBM_1_LLL13998","5obm","LLL","DB04729(GENTAMICIN C1A)","Saccharomyces cerevisiae","25S RIBOSOMAL RNA","no annotation",3,"TYRN5 46;SERN5 48;LYSO5 78","LLL 13998\r"]]