SIMILAR PATTERNS OF AMINO ACIDS FOR 6G31_I_ZOLI401
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1rqj | GERANYLTRANSTRANSFERASE (Escherichiacoli) |
PF00348(polyprenyl_synt) | 4 | ASP A 105ASP A 111LYS A 202GLN A 241 | MG A 907 (-2.5A) MG A 909 (-2.4A)RIS A 901 (-2.5A)RIS A 901 ( 3.6A) | 0.95A | 6g31I-1rqjA:23.8 | 6g31I-1rqjA:13.47 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2a3l | AMP DEAMINASE (Arabidopsisthaliana) |
PF00962(A_deaminase) | 4 | ASP A 737ASP A 736LYS A 466GLN A 546 | CF5 A 841 (-2.5A)CF5 A 841 ( 2.5A)NoneNone | 1.34A | 6g31I-2a3lA:undetectable | 6g31I-2a3lA:10.63 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 2dh4 | YPL069C (Saccharomycescerevisiae) |
PF00348(polyprenyl_synt) | 4 | ASP A 80ASP A 84LYS A 174GLN A 211 | MG A 341 (-2.6A) MG A 341 (-3.0A)NoneNone | 0.74A | 6g31I-2dh4A:33.2 | 6g31I-2dh4A:39.56 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2o1o | PUTATIVE FARNESYLPYROPHOSPHATESYNTHASE (Cryptosporidiumparvum) |
PF00348(polyprenyl_synt) | 4 | ASP A 115ASP A 119LYS A 210GLN A 251 | MG A 503 (-2.5A) MG A 502 (-2.4A)RIS A 400 (-2.8A)RIS A 400 (-3.1A) | 0.86A | 6g31I-2o1oA:23.6 | 6g31I-2o1oA:12.85 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 2q80 | GERANYLGERANYLPYROPHOSPHATESYNTHETASE (Homo sapiens) |
PF00348(polyprenyl_synt) | 4 | ASP A 64ASP A 68LYS A 151GLN A 185 | GRG A 500 (-2.4A) MG A 400 (-2.6A)GRG A 500 (-2.8A)GRG A 500 (-3.2A) | 0.62A | 6g31I-2q80A:38.9 | 6g31I-2q80A:93.67 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3q1o | GERANYLTRANSTRANSFERASE (ISPA) (Helicobacterpylori) |
PF00348(polyprenyl_synt) | 4 | ASP A 92ASP A 98LYS A 186GLN A 225 | MG A 400 ( 2.8A) MG A 400 ( 3.2A)DMA A 501 (-3.1A)DMA A 501 ( 3.8A) | 0.83A | 6g31I-3q1oA:22.9 | 6g31I-3q1oA:14.29 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4e1e | FARNESYLPYROPHOSPHATESYNTHASE (Trypanosomacruzi) |
PF00348(polyprenyl_synt) | 4 | ASP A 98ASP A 102LYS A 207GLN A 247 | MG A 403 (-2.5A) MG A 403 (-2.4A)0MW A 404 (-2.8A)0MW A 404 ( 3.8A) | 0.88A | 6g31I-4e1eA:24.5 | 6g31I-4e1eA:11.98 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4jzx | FARNESYLPYROPHOSPHATESYNTHASE (Leishmaniamajor) |
PF00348(polyprenyl_synt) | 4 | ASP A 98ASP A 102LYS A 207GLN A 247 | CA A 403 (-2.5A) CA A 403 (-2.5A)476 A 402 (-2.7A)IPE A 401 (-3.7A) | 0.96A | 6g31I-4jzxA:24.2 | 6g31I-4jzxA:14.01 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4p0v | FARNESYLPYROPHOSPHATESYNTHASE (Homo sapiens) |
PF00348(polyprenyl_synt) | 4 | ASP A 103ASP A 107LYS A 200GLN A 240 | MG A 405 (-2.5A) MG A 405 (-2.4A)ZOL A 401 (-2.7A)ZOL A 401 (-3.5A) | 1.00A | 6g31I-4p0vA:25.3 | 6g31I-4p0vA:15.75 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4rxe | FARNESYLPYROPHOSPHATESYNTHASE (Trypanosomabrucei) |
PF00348(polyprenyl_synt) | 4 | ASP A 103ASP A 107LYS A 212GLN A 252 | MG A3004 (-2.5A) MG A3004 (-2.3A)3YQ A3001 (-2.9A)3YQ A3001 ( 4.2A) | 0.91A | 6g31I-4rxeA:24.8 | 6g31I-4rxeA:11.14 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5ahu | FARNESYLPYROPHOSPHATESYNTHASE (Trypanosomabrucei) |
PF00348(polyprenyl_synt) | 4 | ASP B 103ASP B 107LYS B 212GLN B 252 | MG B1370 (-2.5A) MG B1369 (-2.2A)G76 B1368 (-2.8A)G76 B1368 ( 4.0A) | 0.88A | 6g31I-5ahuB:21.9 | 6g31I-5ahuB:13.60 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5hn7 | FARNESYLPYROPHOSPHATESYNTHASE, PUTATIVE (Plasmodiumvivax) |
PF00348(polyprenyl_synt) | 4 | ASP A 126ASP A 130LYS A 243GLN A 284 | 04M A 401 ( 4.0A)None04M A 401 (-4.5A)None | 0.73A | 6g31I-5hn7A:25.1 | 6g31I-5hn7A:13.10 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6b07 | FARNESYL DIPHOSPHATESYNTHASE (Choristoneurafumiferana) |
no annotation | 4 | ASP A 147ASP A 151LYS A 244GLN A 284 | MG A 402 (-2.6A) MG A 402 (-2.5A)C6M A 401 (-2.6A)C6M A 401 (-3.7A) | 0.90A | 6g31I-6b07A:25.7 | 6g31I-6b07A:24.14 |