SIMILAR PATTERNS OF AMINO ACIDS FOR 6DM1_C_CYZC1302

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1b5f PROTEIN (CARDOSIN A)

(Cynara
cardunculus) 		PF00026
(Asp) 		5 ILE A  18
SER A  88
GLY A  19
SER A  61
LEU A  38
 None
 1.36A 6dm1B-1b5fA:
undetectable
6dm1C-1b5fA:
undetectable		 6dm1B-1b5fA:
16.91
6dm1C-1b5fA:
16.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1fon PROCARBOXYPEPTIDASE
A-S6

(Bos taurus) 		PF00089
(Trypsin) 		5 ILE A 129
SER A 187
GLY A 185
LEU A 191
ASP A  93
 None
 1.22A 6dm1B-1fonA:
undetectable
6dm1C-1fonA:
undetectable		 6dm1B-1fonA:
15.65
6dm1C-1fonA:
15.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1hn0 CHONDROITIN ABC
LYASE I

(Proteus
vulgaris) 		PF02278
(Lyase_8)
PF02884
(Lyase_8_C)
PF09092
(Lyase_N)
PF09093
(Lyase_catalyt) 		5 GLY A 534
SER A 474
LEU A 578
SER A 581
ASP A 525
 None
 1.46A 6dm1B-1hn0A:
2.8
6dm1C-1hn0A:
2.1		 6dm1B-1hn0A:
6.61
6dm1C-1hn0A:
6.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1o9b HYPOTHETICAL
SHIKIMATE
5-DEHYDROGENASE-LIKE
PROTEIN YDIB

(Escherichia
coli) 		PF08501
(Shikimate_dh_N) 		5 ILE A  10
GLY A  11
PRO A  23
SER A  20
ASP A 107
 None
None
None
None
PO4  A 302 (-3.0A)
 1.42A 6dm1B-1o9bA:
4.6
6dm1C-1o9bA:
2.3		 6dm1B-1o9bA:
13.59
6dm1C-1o9bA:
13.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ofe FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 2

(Synechocystis
sp. PCC 6803) 		PF00310
(GATase_2)
PF01493
(GXGXG)
PF01645
(Glu_synthase)
PF04898
(Glu_syn_central) 		5 ILE A1342
SER A1312
GLY A1314
LEU A1365
ASP A1008
 None
 1.48A 6dm1B-1ofeA:
2.7
6dm1C-1ofeA:
0.9		 6dm1B-1ofeA:
4.64
6dm1C-1ofeA:
4.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pwe L-SERINE DEHYDRATASE

(Rattus
norvegicus) 		PF00291
(PALP) 		5 ILE A  45
GLY A  46
SER A 147
SER A  39
LYS A  30
 None
 0.90A 6dm1B-1pweA:
undetectable
6dm1C-1pweA:
undetectable		 6dm1B-1pweA:
14.19
6dm1C-1pweA:
14.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qdm PROPHYTEPSIN

(Hordeum vulgare) 		PF00026
(Asp)
PF03489
(SapB_2)
PF05184
(SapB_1) 		5 ILE A  22
SER A  93
SER A  66
LEU A  42
ASP A 103
 None
 1.41A 6dm1B-1qdmA:
undetectable
6dm1C-1qdmA:
undetectable		 6dm1B-1qdmA:
10.35
6dm1C-1qdmA:
10.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1smr RENIN

(Mus musculus) 		PF00026
(Asp) 		5 ILE A  18
SER A  88
GLY A  19
SER A  61
LEU A  38
 None
 1.32A 6dm1B-1smrA:
undetectable
6dm1C-1smrA:
undetectable		 6dm1B-1smrA:
11.88
6dm1C-1smrA:
11.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2d0d 2-HYDROXY-6-OXO-7-ME
THYLOCTA-2,4-DIENOAT
E HYDROLASE

(Pseudomonas
fluorescens) 		PF00561
(Abhydrolase_1) 		5 ILE A 110
SER A 103
GLY A 107
LEU A 235
ASP A 224
 None
CL  A 400 (-2.9A)
None
None
None
 1.34A 6dm1B-2d0dA:
undetectable
6dm1C-2d0dA:
undetectable		 6dm1B-2d0dA:
15.47
6dm1C-2d0dA:
15.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2g1s RENIN

(Homo sapiens) 		PF00026
(Asp) 		5 ILE A  97
SER A   4
GLY A  95
LEU A 148
ASP A 177
 None
 1.32A 6dm1B-2g1sA:
undetectable
6dm1C-2g1sA:
undetectable		 6dm1B-2g1sA:
13.84
6dm1C-2g1sA:
13.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hyt TETR-FAMILY
TRANSCRIPTIONAL
REGULATOR

(Pectobacterium
atrosepticum) 		PF00440
(TetR_N) 		5 ILE A 156
SER A 130
SER A  78
LEU A 160
ASP A  71
 None
None
None
EDO  A 197 ( 4.8A)
None
 1.24A 6dm1B-2hytA:
undetectable
6dm1C-2hytA:
undetectable		 6dm1B-2hytA:
14.78
6dm1C-2hytA:
14.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ivf ETHYLBENZENE
DEHYDROGENASE
ALPHA-SUBUNIT
ETHYLBENZENE
DEHYDROGENASE
BETA-SUBUNIT

(Aromatoleum
aromaticum;
Aromatoleum
aromaticum) 		PF00384
(Molybdopterin)
PF01568
(Molydop_binding)
PF13247
(Fer4_11) 		5 SER B 338
GLY B 342
LEU B 331
SER B 334
ASP A 121
 None
 0.88A 6dm1B-2ivfB:
undetectable
6dm1C-2ivfB:
undetectable		 6dm1B-2ivfB:
12.46
6dm1C-2ivfB:
12.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2q9v MEMBRANE-ASSOCIATED
GUANYLATE KINASE, WW
AND PDZ
DOMAIN-CONTAINING
PROTEIN 1

(Homo sapiens) 		PF00595
(PDZ) 		5 ILE A 867
GLY A 885
MET A 838
SER A 837
LEU A 882
 None
 1.26A 6dm1B-2q9vA:
undetectable
6dm1C-2q9vA:
undetectable		 6dm1B-2q9vA:
17.20
6dm1C-2q9vA:
17.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qs9 RETINOBLASTOMA-BINDI
NG PROTEIN 9

(Homo sapiens) 		PF06821
(Ser_hydrolase) 		5 ILE A  72
SER A  75
GLY A  73
LEU A 174
ASP A 138
 None
 1.27A 6dm1B-2qs9A:
5.0
6dm1C-2qs9A:
3.1		 6dm1B-2qs9A:
13.33
6dm1C-2qs9A:
13.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2v7b BENZOATE-COENZYME A
LIGASE

(Paraburkholderia
xenovorans) 		PF00501
(AMP-binding)
PF13193
(AMP-binding_C) 		5 ILE A 332
GLY A 333
SER A 387
LEU A 381
SER A 410
 None
BEZ  A1529 (-3.6A)
None
None
None
 1.13A 6dm1B-2v7bA:
2.7
6dm1C-2v7bA:
3.7		 6dm1B-2v7bA:
11.30
6dm1C-2v7bA:
11.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2wsb GALACTITOL
DEHYDROGENASE

(Rhodobacter
sphaeroides) 		PF13561
(adh_short_C2) 		5 ILE A 225
SER A  21
LEU A 142
SER A  92
ASP A  42
 None
NAD  A 500 (-2.7A)
NAD  A 500 (-3.7A)
NAD  A 500 (-3.1A)
NAD  A 500 (-2.8A)
 1.29A 6dm1B-2wsbA:
4.9
6dm1C-2wsbA:
4.0		 6dm1B-2wsbA:
14.74
6dm1C-2wsbA:
14.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xub DNA-DIRECTED RNA
POLYMERASE III
SUBUNIT RPC3

(Homo sapiens) 		PF05645
(RNA_pol_Rpc82)
PF08221
(HTH_9) 		5 ILE A 293
SER A 264
PRO A 298
LEU A 308
ASP A 260
 None
 1.43A 6dm1B-2xubA:
5.1
6dm1C-2xubA:
undetectable		 6dm1B-2xubA:
11.09
6dm1C-2xubA:
11.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3cdi POLYNUCLEOTIDE
PHOSPHORYLASE

(Escherichia
coli) 		PF01138
(RNase_PH)
PF03725
(RNase_PH_C)
PF03726
(PNPase) 		5 ILE A 556
SER A 465
GLY A 486
SER A 460
LEU A 350
 None
 1.25A 6dm1B-3cdiA:
undetectable
6dm1C-3cdiA:
undetectable		 6dm1B-3cdiA:
10.86
6dm1C-3cdiA:
10.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3cer POSSIBLE
EXOPOLYPHOSPHATASE-L
IKE PROTEIN

(Bifidobacterium
longum) 		PF02541
(Ppx-GppA) 		5 ILE A 229
SER A 232
GLY A 230
SER A 131
ASP A  22
 None
SO4  A 345 ( 3.4A)
None
None
SO4  A 346 (-3.0A)
 1.47A 6dm1B-3cerA:
undetectable
6dm1C-3cerA:
2.5		 6dm1B-3cerA:
15.15
6dm1C-3cerA:
15.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ftj MACROLIDE EXPORT
ATP-BINDING/PERMEASE
PROTEIN MACB

(Aggregatibacter
actinomycetemcomitans) 		PF12704
(MacB_PCD) 		5 ILE A 472
PRO A 439
LEU A 379
SER A 463
ASP A 404
 None
 1.43A 6dm1B-3ftjA:
undetectable
6dm1C-3ftjA:
undetectable		 6dm1B-3ftjA:
18.91
6dm1C-3ftjA:
18.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3get HISTIDINOL-PHOSPHATE
AMINOTRANSFERASE

(Campylobacter
jejuni) 		PF00155
(Aminotran_1_2) 		5 ILE A  86
SER A  90
GLY A  87
SER A 225
ASP A 190
 None
LLP  A 226 ( 2.9A)
None
LLP  A 226 ( 2.4A)
LLP  A 226 ( 2.6A)
 1.24A 6dm1B-3getA:
3.6
6dm1C-3getA:
4.1		 6dm1B-3getA:
13.92
6dm1C-3getA:
13.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3get HISTIDINOL-PHOSPHATE
AMINOTRANSFERASE

(Campylobacter
jejuni) 		PF00155
(Aminotran_1_2) 		5 ILE A  86
SER A  90
GLY A  87
SER A 225
LEU A  73
 None
LLP  A 226 ( 2.9A)
None
LLP  A 226 ( 2.4A)
None
 1.19A 6dm1B-3getA:
3.6
6dm1C-3getA:
4.1		 6dm1B-3getA:
13.92
6dm1C-3getA:
13.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3glq ADENOSYLHOMOCYSTEINA
SE

(Burkholderia
pseudomallei) 		PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase) 		5 ILE A 246
SER A 241
GLY A 245
LEU A 275
SER A 274
 None
 1.17A 6dm1B-3glqA:
4.8
6dm1C-3glqA:
3.1		 6dm1B-3glqA:
11.84
6dm1C-3glqA:
11.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gme POLYRIBONUCLEOTIDE
NUCLEOTIDYLTRANSFERA
SE

(Escherichia
coli) 		PF01138
(RNase_PH)
PF03725
(RNase_PH_C)
PF03726
(PNPase) 		5 ILE A 533
SER A 442
GLY A 463
SER A 437
LEU A 327
 None
 1.23A 6dm1B-3gmeA:
undetectable
6dm1C-3gmeA:
undetectable		 6dm1B-3gmeA:
10.86
6dm1C-3gmeA:
10.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3h8l NADH OXIDASE

(Acidianus
ambivalens) 		PF07992
(Pyr_redox_2) 		5 ILE A 288
MET A  87
SER A  86
LEU A 274
SER A 277
 None
 1.14A 6dm1B-3h8lA:
undetectable
6dm1C-3h8lA:
undetectable		 6dm1B-3h8lA:
11.93
6dm1C-3h8lA:
11.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hwp PHLG

(Pseudomonas
protegens) 		no annotation 5 SER A 227
MET A 212
SER A 196
LEU A  61
ASP A 271
 None
 1.28A 6dm1B-3hwpA:
undetectable
6dm1C-3hwpA:
undetectable		 6dm1B-3hwpA:
15.47
6dm1C-3hwpA:
15.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3iwt 178AA LONG
HYPOTHETICAL
MOLYBDENUM COFACTOR
BIOSYNTHESIS PROTEIN
B

(Sulfurisphaera
tokodaii) 		PF00994
(MoCF_biosynth) 		5 ILE A  45
GLY A  42
PRO A 154
LEU A 150
ASP A  64
 None
 1.36A 6dm1B-3iwtA:
6.3
6dm1C-3iwtA:
6.4		 6dm1B-3iwtA:
18.23
6dm1C-3iwtA:
18.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3j31 COAT PROTEIN

(Sulfolobus
turreted
icosahedral
virus 1) 		no annotation 5 ILE A 220
GLY A 225
PRO A  56
SER A  54
SER A 268
 None
 1.29A 6dm1B-3j31A:
undetectable
6dm1C-3j31A:
undetectable		 6dm1B-3j31A:
12.70
6dm1C-3j31A:
12.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jcm U4/U6 SMALL NUCLEAR
RIBONUCLEOPROTEIN
PRP4

(Saccharomyces
cerevisiae) 		PF00400
(WD40) 		5 ILE B 373
GLY B 367
SER B 314
LEU B 410
ASP B 444
 None
 1.18A 6dm1B-3jcmB:
undetectable
6dm1C-3jcmB:
undetectable		 6dm1B-3jcmB:
9.73
6dm1C-3jcmB:
9.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jwe MGLL PROTEIN

(Homo sapiens) 		PF12146
(Hydrolase_4) 		5 ILE A 139
SER A 132
GLY A 135
LEU A 260
ASP A 249
 None
F4P  A 314 (-1.2A)
None
None
None
 1.44A 6dm1B-3jweA:
3.9
6dm1C-3jweA:
2.4		 6dm1B-3jweA:
15.00
6dm1C-3jweA:
15.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k3p D-ALANINE--D-ALANINE
LIGASE

(Streptococcus
mutans) 		PF01820
(Dala_Dala_lig_N)
PF07478
(Dala_Dala_lig_C) 		5 PRO A 316
MET A 314
SER A 313
LEU A 285
ASP A 289
 None
 1.05A 6dm1B-3k3pA:
3.0
6dm1C-3k3pA:
3.0		 6dm1B-3k3pA:
14.60
6dm1C-3k3pA:
14.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kio RIBONUCLEASE H2
SUBUNIT A
RIBONUCLEASE H2
SUBUNIT C

(Mus musculus;
Mus musculus) 		PF01351
(RNase_HII)
PF08615
(RNase_H2_suC) 		5 GLY A  12
SER C  62
LEU A 117
SER A 105
ASP C 105
 None
 1.45A 6dm1B-3kioA:
2.1
6dm1C-3kioA:
undetectable		 6dm1B-3kioA:
16.54
6dm1C-3kioA:
16.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lws AROMATIC AMINO ACID
BETA-ELIMINATING
LYASE/THREONINE
ALDOLASE

(Exiguobacterium
sibiricum) 		PF01212
(Beta_elim_lyase) 		5 ILE A 147
GLY A 148
PRO A 143
SER A 286
LEU A 123
 None
 1.18A 6dm1B-3lwsA:
3.4
6dm1C-3lwsA:
2.6		 6dm1B-3lwsA:
14.08
6dm1C-3lwsA:
14.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3pf0 IMELYSIN-LIKE
PROTEIN

(Psychrobacter
arcticus) 		PF09375
(Peptidase_M75) 		5 ILE A 193
GLY A 192
MET A 215
LEU A 130
SER A  99
 None
 1.46A 6dm1B-3pf0A:
3.0
6dm1C-3pf0A:
undetectable		 6dm1B-3pf0A:
14.02
6dm1C-3pf0A:
14.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3pj0 LMO0305 PROTEIN

(Listeria
monocytogenes) 		PF01212
(Beta_elim_lyase) 		5 ILE A 149
GLY A 150
PRO A 145
SER A 288
LEU A 124
 None
 1.17A 6dm1B-3pj0A:
3.3
6dm1C-3pj0A:
2.3		 6dm1B-3pj0A:
13.35
6dm1C-3pj0A:
13.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3pzy MOG

(Mycobacterium
avium) 		PF00994
(MoCF_biosynth) 		5 ILE A  28
GLY A  25
PRO A 132
LEU A 128
ASP A  47
 None
 1.25A 6dm1B-3pzyA:
5.7
6dm1C-3pzyA:
undetectable		 6dm1B-3pzyA:
18.71
6dm1C-3pzyA:
18.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3s51 FANCONI ANEMIA GROUP
I PROTEIN HOMOLOG

(Mus musculus) 		PF14674
(FANCI_S1-cap)
PF14675
(FANCI_S1)
PF14676
(FANCI_S2)
PF14677
(FANCI_S3)
PF14678
(FANCI_S4)
PF14679
(FANCI_HD1)
PF14680
(FANCI_HD2) 		5 ILE A 233
SER A 228
GLY A 232
LEU A 218
SER A 221
 None
 1.10A 6dm1B-3s51A:
2.9
6dm1C-3s51A:
undetectable		 6dm1B-3s51A:
6.07
6dm1C-3s51A:
6.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3v4p INTEGRIN ALPHA-4

(Homo sapiens) 		PF01839
(FG-GAP)
PF08441
(Integrin_alpha2) 		5 ILE A 390
SER A 395
GLY A 387
LEU A  10
SER A 424
 None
 1.44A 6dm1B-3v4pA:
undetectable
6dm1C-3v4pA:
undetectable		 6dm1B-3v4pA:
9.06
6dm1C-3v4pA:
9.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vxi DYP

(Bjerkandera
adusta) 		PF04261
(Dyp_perox) 		5 ILE A  11
GLY A  13
SER A 330
LEU A 198
SER A 216
 None
 1.28A 6dm1B-3vxiA:
undetectable
6dm1C-3vxiA:
undetectable		 6dm1B-3vxiA:
10.14
6dm1C-3vxiA:
10.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3w1j L-SERYL-TRNA(SEC)
SELENIUM TRANSFERASE

(Aquifex
aeolicus) 		PF03841
(SelA) 		5 ILE A  80
PRO A 386
LEU A 286
SER A 250
ASP A 247
 LLP  A 285 (-4.6A)
None
LLP  A 285 ( 4.3A)
None
LLP  A 285 ( 3.0A)
 1.50A 6dm1B-3w1jA:
4.3
6dm1C-3w1jA:
3.1		 6dm1B-3w1jA:
11.58
6dm1C-3w1jA:
11.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3w94 ENTEROPEPTIDASE-1

(Oryzias latipes) 		PF00089
(Trypsin) 		5 ILE A 994
GLY A 995
LEU A 946
ASP A 973
LYS A 795
 None
 1.29A 6dm1B-3w94A:
undetectable
6dm1C-3w94A:
undetectable		 6dm1B-3w94A:
13.54
6dm1C-3w94A:
13.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wbh ALKALINE PHOSPHATASE

(Halomonas sp.
#593) 		PF00245
(Alk_phosphatase) 		5 ILE A  83
SER A  80
PRO A 127
SER A  78
ASP A  59
 None
 1.48A 6dm1B-3wbhA:
undetectable
6dm1C-3wbhA:
undetectable		 6dm1B-3wbhA:
10.93
6dm1C-3wbhA:
10.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wwe OXIDIZED POLYVINYL
ALCOHOL HYDROLASE

(Pseudomonas sp.
VM15C) 		no annotation 5 ILE A  46
GLY A  31
LEU A  74
SER A  83
ASP A  87
 None
 1.40A 6dm1B-3wweA:
4.0
6dm1C-3wweA:
2.5		 6dm1B-3wweA:
15.89
6dm1C-3wweA:
15.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4a5q CHI1

(Yersinia
entomophaga) 		PF00704
(Glyco_hydro_18) 		5 ILE A 212
SER A 116
GLY A 213
LEU A 251
SER A 209
 None
 1.48A 6dm1B-4a5qA:
undetectable
6dm1C-4a5qA:
2.2		 6dm1B-4a5qA:
10.59
6dm1C-4a5qA:
10.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bmd S-M CHECKPOINT
CONTROL PROTEIN RAD4

(Schizosaccharomyces
pombe) 		PF00533
(BRCT)
PF16589
(BRCT_2) 		5 ILE A 473
GLY A 476
SER A 392
LEU A 469
ASP A 480
 None
 1.39A 6dm1B-4bmdA:
2.7
6dm1C-4bmdA:
undetectable		 6dm1B-4bmdA:
14.72
6dm1C-4bmdA:
14.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4da9 SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE

(Sinorhizobium
meliloti) 		PF13561
(adh_short_C2) 		5 GLY A  93
LEU A 168
SER A 164
ASP A 160
LYS A 157
 None
 1.48A 6dm1B-4da9A:
2.3
6dm1C-4da9A:
3.8		 6dm1B-4da9A:
13.69
6dm1C-4da9A:
13.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4dpy MEVALONATE
DIPHOSPHATE
DECARBOXYLASE

(Staphylococcus
epidermidis) 		PF00288
(GHMP_kinases_N) 		5 ILE A 167
GLY A 166
SER A 132
LEU A  34
SER A  35
 None
 1.48A 6dm1B-4dpyA:
2.1
6dm1C-4dpyA:
undetectable		 6dm1B-4dpyA:
14.63
6dm1C-4dpyA:
14.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4h0c PHOSPHOLIPASE/CARBOX
YLESTERASE

(Dyadobacter
fermentans) 		PF02230
(Abhydrolase_2) 		5 ILE A 126
SER A 105
GLY A 103
SER A 154
ASP A 159
 None
CIT  A 301 (-3.1A)
None
None
None
 1.15A 6dm1B-4h0cA:
2.9
6dm1C-4h0cA:
3.2		 6dm1B-4h0cA:
19.63
6dm1C-4h0cA:
19.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4h27 L-SERINE
DEHYDRATASE/L-THREON
INE DEAMINASE

(Homo sapiens) 		PF00291
(PALP) 		5 ILE A  45
GLY A  46
SER A 147
SER A  39
LYS A  30
 LLP  A  41 ( 3.7A)
None
None
LLP  A  41 ( 2.9A)
None
 1.01A 6dm1B-4h27A:
undetectable
6dm1C-4h27A:
undetectable		 6dm1B-4h27A:
13.57
6dm1C-4h27A:
13.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ifd EXOSOME COMPLEX
COMPONENT RRP43

(Saccharomyces
cerevisiae) 		PF01138
(RNase_PH) 		5 ILE C 331
SER C 345
GLY C 298
LEU C  31
SER C 342
 None
 1.36A 6dm1B-4ifdC:
undetectable
6dm1C-4ifdC:
undetectable		 6dm1B-4ifdC:
11.73
6dm1C-4ifdC:
11.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kg7 PEPTIDASE S8 AND
S53, SUBTILISIN,
KEXIN, SEDOLISIN

(Mycolicibacterium
smegmatis) 		PF00082
(Peptidase_S8) 		5 ILE A 134
GLY A 349
PRO A 148
SER A  84
LEU A 152
 None
 1.29A 6dm1B-4kg7A:
5.6
6dm1C-4kg7A:
6.0		 6dm1B-4kg7A:
11.81
6dm1C-4kg7A:
11.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ky0 PROTON/GLUTAMATE
SYMPORTER, SDF
FAMILY

(Thermococcus
kodakarensis) 		PF00375
(SDF) 		5 ILE A 161
SER A  74
GLY A 164
PRO A  77
ASP A 298
 None
 1.42A 6dm1B-4ky0A:
undetectable
6dm1C-4ky0A:
undetectable		 6dm1B-4ky0A:
13.44
6dm1C-4ky0A:
13.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ky0 PROTON/GLUTAMATE
SYMPORTER, SDF
FAMILY

(Thermococcus
kodakarensis) 		PF00375
(SDF) 		5 SER A  74
GLY A 164
PRO A  77
ASP A 298
LYS A 421
 None
 1.31A 6dm1B-4ky0A:
undetectable
6dm1C-4ky0A:
undetectable		 6dm1B-4ky0A:
13.44
6dm1C-4ky0A:
13.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4m47 DNA POLYMERASE BETA

(Homo sapiens) 		PF10391
(DNA_pol_lambd_f)
PF14716
(HHH_8)
PF14791
(DNA_pol_B_thumb)
PF14792
(DNA_pol_B_palm) 		5 ILE A 119
GLY A 118
LEU A 100
SER A  96
ASP A  91
 None
 1.36A 6dm1B-4m47A:
3.1
6dm1C-4m47A:
undetectable		 6dm1B-4m47A:
11.73
6dm1C-4m47A:
11.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4r12 PUTATIVE
UNCHARACTERIZED
PROTEIN

(Dictyostelium
purpureum) 		PF05450
(Nicastrin) 		5 SER A 585
GLY A 570
LEU A 205
SER A 201
ASP A  49
 None
 1.49A 6dm1B-4r12A:
undetectable
6dm1C-4r12A:
undetectable		 6dm1B-4r12A:
8.53
6dm1C-4r12A:
8.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4r39 BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2

(Erythrobacter
litoralis) 		PF07568
(HisKA_2)
PF13581
(HATPase_c_2) 		5 ILE A 303
GLY A 300
LEU A 242
SER A 245
ASP A 216
 None
ANP  A 402 (-3.3A)
None
None
None
 1.47A 6dm1B-4r39A:
undetectable
6dm1C-4r39A:
undetectable		 6dm1B-4r39A:
17.04
6dm1C-4r39A:
17.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rk9 CARBOHYDRATE ABC
TRANSPORTER
SUBSTRATE-BINDING
PROTEIN MSME

(Bacillus
licheniformis) 		PF01547
(SBP_bac_1) 		5 ILE A 144
SER A 301
GLY A 143
LEU A 165
ASP A 298
 None
 0.94A 6dm1B-4rk9A:
5.1
6dm1C-4rk9A:
3.7		 6dm1B-4rk9A:
12.02
6dm1C-4rk9A:
12.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rsw HOPA1

(Pseudomonas
syringae) 		no annotation 5 ILE A 204
GLY A 201
PRO A 187
LEU A 174
LYS A 220
 None
 1.46A 6dm1B-4rswA:
undetectable
6dm1C-4rswA:
undetectable		 6dm1B-4rswA:
13.73
6dm1C-4rswA:
13.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4tr2 SUBTILISIN-LIKE 1
SERINE PROTEASE

(Plasmodium
vivax) 		PF00082
(Peptidase_S8) 		5 PRO A 529
MET A 550
LEU A 513
SER A 517
ASP A 202
 None
 1.33A 6dm1B-4tr2A:
5.8
6dm1C-4tr2A:
6.1		 6dm1B-4tr2A:
8.65
6dm1C-4tr2A:
8.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5aor DOSAGE COMPENSATION
REGULATOR

(Drosophila
melanogaster) 		PF00270
(DEAD)
PF00271
(Helicase_C)
PF04408
(HA2)
PF07717
(OB_NTP_bind) 		5 ILE A 886
SER A 920
SER A1000
ASP A 998
LYS A1149
 None
 1.48A 6dm1B-5aorA:
3.4
6dm1C-5aorA:
undetectable		 6dm1B-5aorA:
5.36
6dm1C-5aorA:
5.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ayn SOLUTE CARRIER
FAMILY 39
(IRON-REGULATED
TRANSPORTER)

(Bdellovibrio
bacteriovorus) 		PF06963
(FPN1) 		5 SER A 355
PRO A 299
SER A 294
LEU A 307
SER A 311
 None
 1.46A 6dm1B-5aynA:
3.1
6dm1C-5aynA:
undetectable		 6dm1B-5aynA:
13.99
6dm1C-5aynA:
13.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b4x REELIN

(Mus musculus) 		PF07974
(EGF_2) 		5 SER A2298
PRO A2039
SER A2036
LEU A2054
SER A2077
 None
 1.47A 6dm1B-5b4xA:
undetectable
6dm1C-5b4xA:
undetectable		 6dm1B-5b4xA:
7.63
6dm1C-5b4xA:
7.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5d39 SIGNAL TRANSDUCER
AND ACTIVATOR OF
TRANSCRIPTION 6

(Homo sapiens) 		PF00017
(SH2)
PF01017
(STAT_alpha)
PF02864
(STAT_bind) 		5 ILE A 606
SER A 627
GLY A 603
SER A 531
LEU A 615
 None
 1.34A 6dm1B-5d39A:
2.3
6dm1C-5d39A:
undetectable		 6dm1B-5d39A:
11.60
6dm1C-5d39A:
11.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5h6s AMIDASE

(Microbacterium
sp. HM58-2) 		PF01425
(Amidase) 		5 ILE A 170
GLY A 171
PRO A  76
LEU A  72
ASP A 105
 None
 1.43A 6dm1B-5h6sA:
2.4
6dm1C-5h6sA:
undetectable		 6dm1B-5h6sA:
8.94
6dm1C-5h6sA:
8.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5hqn SPHINGOMYELIN
PHOSPHODIESTERASE

(Mus musculus) 		PF00149
(Metallophos) 		5 ILE A 277
GLY A 275
PRO A 312
SER A 377
LEU A 294
 None
 1.49A 6dm1B-5hqnA:
undetectable
6dm1C-5hqnA:
undetectable		 6dm1B-5hqnA:
10.11
6dm1C-5hqnA:
10.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ip7 DNA-DIRECTED RNA
POLYMERASE II
SUBUNIT RPB3
DNA-DIRECTED RNA
POLYMERASES I, II,
AND III SUBUNIT
RPABC5

(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		PF01000
(RNA_pol_A_bac)
PF01193
(RNA_pol_L)
PF01194
(RNA_pol_N) 		5 ILE C  46
GLY C  68
LEU C 118
SER C 115
ASP J  16
 None
 1.42A 6dm1B-5ip7C:
undetectable
6dm1C-5ip7C:
undetectable		 6dm1B-5ip7C:
14.29
6dm1C-5ip7C:
14.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ip7 DNA-DIRECTED RNA
POLYMERASE II
SUBUNIT RPB3
DNA-DIRECTED RNA
POLYMERASES I, II,
AND III SUBUNIT
RPABC5

(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		PF01000
(RNA_pol_A_bac)
PF01193
(RNA_pol_L)
PF01194
(RNA_pol_N) 		5 ILE C  46
SER C 237
LEU C 118
SER C 115
ASP J  16
 None
 1.46A 6dm1B-5ip7C:
undetectable
6dm1C-5ip7C:
undetectable		 6dm1B-5ip7C:
14.29
6dm1C-5ip7C:
14.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5kf7 BIFUNCTIONAL PROTEIN
PUTA

(Sinorhizobium
meliloti) 		PF00171
(Aldedh)
PF01619
(Pro_dh)
PF14850
(Pro_dh-DNA_bdg) 		5 ILE A 247
SER A 217
GLY A 261
LEU A 205
SER A 208
 None
 1.31A 6dm1B-5kf7A:
undetectable
6dm1C-5kf7A:
undetectable		 6dm1B-5kf7A:
5.15
6dm1C-5kf7A:
5.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5l1b GLUTAMATE RECEPTOR
2,GLUTAMATE RECEPTOR
2

(Rattus
norvegicus) 		PF00060
(Lig_chan)
PF01094
(ANF_receptor)
PF10613
(Lig_chan-Glu_bd) 		5 MET A 496
SER A 497
LEU A 751
ASP A 760
LYS A 763
 None
 0.99A 6dm1B-5l1bA:
40.1
6dm1C-5l1bA:
40.4		 6dm1B-5l1bA:
100.00
6dm1C-5l1bA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5nfg PROCARDOSIN-B,PROCAR
DOSIN-B

(Cynara
cardunculus) 		no annotation 5 ILE A  66
SER A 137
GLY A  67
SER A 110
LEU A  86
 None
 1.30A 6dm1B-5nfgA:
undetectable
6dm1C-5nfgA:
undetectable		 6dm1B-5nfgA:
11.50
6dm1C-5nfgA:
11.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5w0a GLUCANASE

(Trichoderma
harzianum) 		no annotation 5 ILE A 290
GLY A 225
PRO A 294
LEU A 302
SER A 213
 ILE  A 290 ( 0.7A)
GLY  A 225 ( 0.0A)
PRO  A 294 ( 1.1A)
LEU  A 302 ( 0.6A)
SER  A 213 ( 0.0A)
 1.10A 6dm1B-5w0aA:
undetectable
6dm1C-5w0aA:
undetectable		 6dm1B-5w0aA:
20.93
6dm1C-5w0aA:
20.93
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5wel CHIMERA OF GLUTAMATE
RECEPTOR 2, GERM
CELL-SPECIFIC GENE
1-LIKE PROTEIN

(Mus musculus;
Rattus
norvegicus) 		PF00060
(Lig_chan)
PF01094
(ANF_receptor)
PF07803
(GSG-1)
PF10613
(Lig_chan-Glu_bd) 		7 PRO A 494
MET A 496
SER A 497
LEU A 751
SER A 754
ASP A 760
LYS A 763
 None
 0.73A 6dm1B-5welA:
53.1
6dm1C-5welA:
53.6		 6dm1B-5welA:
100.00
6dm1C-5welA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5weo GLUTAMATE RECEPTOR
2,VOLTAGE-DEPENDENT
CALCIUM CHANNEL
GAMMA-2 SUBUNIT
CHIMERA

(Mus musculus;
Rattus
norvegicus) 		PF00060
(Lig_chan)
PF00822
(PMP22_Claudin)
PF01094
(ANF_receptor)
PF10613
(Lig_chan-Glu_bd) 		7 PRO A 494
MET A 496
SER A 497
LEU A 751
SER A 754
ASP A 760
LYS A 763
 CYZ  A1302 (-4.5A)
CYZ  A1302 (-4.3A)
CYZ  A1302 (-3.2A)
None
CYZ  A1302 ( 4.1A)
CYZ  A1302 (-3.8A)
CYZ  A1302 (-2.9A)
 0.28A 6dm1B-5weoA:
55.9
6dm1C-5weoA:
56.1		 6dm1B-5weoA:
100.00
6dm1C-5weoA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xau LAMININ SUBUNIT
ALPHA-5

(Homo sapiens) 		PF02210
(Laminin_G_2)
PF06009
(Laminin_II) 		5 ILE A3094
GLY A3093
SER A3024
LEU A3103
SER A2944
 None
 1.23A 6dm1B-5xauA:
undetectable
6dm1C-5xauA:
undetectable		 6dm1B-5xauA:
8.30
6dm1C-5xauA:
8.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5yv5 ATPASE RIL

(Pyrococcus
furiosus) 		no annotation 5 ILE A 303
GLY A 302
LEU A 273
SER A 277
LYS A  97
 None
 1.40A 6dm1B-5yv5A:
undetectable
6dm1C-5yv5A:
undetectable		 6dm1B-5yv5A:
undetectable
6dm1C-5yv5A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6d6k POLYRIBONUCLEOTIDE
NUCLEOTIDYLTRANSFERA
SE

(Acinetobacter
baumannii) 		no annotation 5 ILE A 535
SER A 444
GLY A 465
SER A 439
LEU A 329
 None
 1.09A 6dm1B-6d6kA:
undetectable
6dm1C-6d6kA:
undetectable		 6dm1B-6d6kA:
18.82
6dm1C-6d6kA:
18.82