SIMILAR PATTERNS OF AMINO ACIDS FOR 5X7R_B_ACRB1481

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1dex RHAMNOGALACTURONAN
ACETYLESTERASE

(Aspergillus
aculeatus) 		PF13472
(Lipase_GDSL_2) 		4 SER A  98
ARG A  50
GLU A 105
TYR A 100
 None
 1.29A 5x7rB-1dexA:
undetectable		 5x7rB-1dexA:
11.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1g38 MODIFICATION
METHYLASE TAQI

(Thermus
aquaticus) 		PF07669
(Eco57I)
PF12950
(TaqI_C) 		4 SER A 370
ARG A 406
GLU A 408
TYR A 409
 None
 1.47A 5x7rB-1g38A:
0.0		 5x7rB-1g38A:
14.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1j0n XANTHAN LYASE

(Bacillus sp.
GL1) 		PF02278
(Lyase_8)
PF02884
(Lyase_8_C)
PF08124
(Lyase_8_N) 		4 TRP A 199
SER A 258
GLU A 310
TYR A 255
 None
CEG  A 780 ( 4.7A)
CEG  A 780 ( 4.3A)
CEG  A 780 (-4.4A)
 1.30A 5x7rB-1j0nA:
5.8		 5x7rB-1j0nA:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1kcm PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
ALPHA

(Mus musculus) 		PF02121
(IP_trans) 		4 HIS A 127
ARG A   8
GLU A   6
TYR A 194
 None
 1.17A 5x7rB-1kcmA:
0.0		 5x7rB-1kcmA:
12.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1lln ANTIVIRAL PROTEIN 3

(Phytolacca
americana) 		PF00161
(RIP) 		4 SER A 116
ARG A 127
GLU A 121
TYR A 117
 MLY  A 115 ( 4.2A)
None
None
None
 1.43A 5x7rB-1llnA:
0.0		 5x7rB-1llnA:
11.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1mk2 SMAD 3

(Homo sapiens) 		PF03166
(MH2) 		4 SER A 235
HIS A 398
ARG A 372
GLU A 396
 None
None
ACY  A   2 (-4.5A)
None
 1.19A 5x7rB-1mk2A:
0.0		 5x7rB-1mk2A:
10.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ms8 TRANS-SIALIDASE

(Trypanosoma
cruzi) 		PF13385
(Laminin_G_3)
PF13859
(BNR_3) 		4 SER A 343
ARG A  35
GLU A 357
TYR A 342
 None
DAN  A 700 (-3.0A)
None
DAN  A 700 (-3.5A)
 1.29A 5x7rB-1ms8A:
5.6		 5x7rB-1ms8A:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1nw1 CHOLINE KINASE (49.2
KD)

(Caenorhabditis
elegans) 		PF01633
(Choline_kinase) 		4 TRP A 201
HIS A 121
GLU A 303
TYR A 304
 None
 1.35A 5x7rB-1nw1A:
undetectable		 5x7rB-1nw1A:
15.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1o7f CAMP-DEPENDENT RAP1
GUANINE-NUCLEOTIDE
EXCHANGE FACTOR

(Mus musculus) 		PF00027
(cNMP_binding)
PF00610
(DEP) 		4 HIS A 359
ARG A 429
GLU A 357
TYR A 377
 None
 1.45A 5x7rB-1o7fA:
2.7		 5x7rB-1o7fA:
16.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ru4 PECTATE LYASE

(Dickeya
chrysanthemi) 		PF13229
(Beta_helix) 		4 TRP A 229
HIS A 172
ARG A 116
GLU A 148
 None
 1.29A 5x7rB-1ru4A:
undetectable		 5x7rB-1ru4A:
15.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wzc MANNOSYL-3-PHOSPHOGL
YCERATE PHOSPHATASE

(Pyrococcus
horikoshii) 		PF08282
(Hydrolase_3) 		4 SER A 118
ARG A 140
GLU A 144
TYR A 115
 None
 1.17A 5x7rB-1wzcA:
undetectable		 5x7rB-1wzcA:
11.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM

(Rattus
norvegicus) 		PF02121
(IP_trans) 		4 HIS A 126
ARG A   8
GLU A   6
TYR A 193
 None
 1.15A 5x7rB-2a1lA:
undetectable		 5x7rB-2a1lA:
11.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2a8i THREONINE ASPARTASE
1

(Homo sapiens) 		PF01112
(Asparaginase_2) 		4 SER A 134
ARG A 172
GLU A 168
TYR A 171
 None
 0.97A 5x7rB-2a8iA:
undetectable		 5x7rB-2a8iA:
16.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2lqt COILED-COIL-HELIX-CO
ILED-COIL-HELIX
DOMAIN-CONTAINING
PROTEIN 7

(Homo sapiens) 		no annotation 4 SER A  23
ARG A  43
GLU A  19
TYR A  40
 None
 1.45A 5x7rB-2lqtA:
undetectable		 5x7rB-2lqtA:
4.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2v6o THIOREDOXIN
GLUTATHIONE
REDUCTASE

(Schistosoma
mansoni) 		PF00462
(Glutaredoxin)
PF02852
(Pyr_redox_dim)
PF07992
(Pyr_redox_2) 		4 SER A 307
HIS A 173
ARG A 187
GLU A 176
 None
 1.43A 5x7rB-2v6oA:
undetectable		 5x7rB-2v6oA:
18.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2vpj KELCH-LIKE PROTEIN
12

(Homo sapiens) 		PF01344
(Kelch_1) 		4 SER A 464
ARG A 392
GLU A 417
TYR A 434
 None
None
ACT  A1569 (-3.8A)
None
 1.14A 5x7rB-2vpjA:
3.8		 5x7rB-2vpjA:
13.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3fgt PUTATIVE
PHOSPHOLIPASE B-LIKE
2 28 KDA FORM

(Mus musculus) 		PF04916
(Phospholip_B) 		4 SER A  68
HIS A  85
ARG A  79
GLU A  81
 None
 1.29A 5x7rB-3fgtA:
undetectable		 5x7rB-3fgtA:
10.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hxk SUGAR HYDROLASE

(Lactococcus
lactis) 		PF00326
(Peptidase_S9) 		4 TRP A 161
SER A 127
HIS A 231
GLU A  61
 None
 1.42A 5x7rB-3hxkA:
undetectable		 5x7rB-3hxkA:
11.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ppz SERINE/THREONINE-PRO
TEIN KINASE CTR1

(Arabidopsis
thaliana) 		PF07714
(Pkinase_Tyr) 		4 TRP A 717
SER A 679
ARG A 635
TYR A 634
 None
None
STU  A   1 (-2.9A)
None
 1.41A 5x7rB-3ppzA:
2.0		 5x7rB-3ppzA:
13.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3rmh YEAST CDC13 OB4

([Candida]
glabrata) 		no annotation 4 SER A 722
ARG A 652
GLU A 650
TYR A 675
 None
 1.32A 5x7rB-3rmhA:
undetectable		 5x7rB-3rmhA:
7.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gvf BETA-HEXOSAMINIDASE

(Salmonella
enterica) 		PF00933
(Glyco_hydro_3) 		4 SER A 225
HIS A 213
ARG A 264
GLU A 253
 None
 1.34A 5x7rB-4gvfA:
1.2		 5x7rB-4gvfA:
14.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4l6y PROTEIN REGULATOR OF
CYTOKINESIS 1

(Homo sapiens) 		PF03999
(MAP65_ASE1) 		4 TRP A 436
HIS A 439
ARG A 392
GLU A 369
 None
 1.43A 5x7rB-4l6yA:
undetectable		 5x7rB-4l6yA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4nzm INOSITOL
HEXAKISPHOSPHATE AND
DIPHOSPHOINOSITOL-PE
NTAKISPHOSPHATE
KINASE 2

(Homo sapiens) 		no annotation 4 SER A 331
HIS A 258
ARG A 281
GLU A 260
 None
 1.48A 5x7rB-4nzmA:
undetectable		 5x7rB-4nzmA:
14.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4p2b GLUTAMINE
AMINOACYL-TRNA
SYNTHETASE

(Toxoplasma
gondii) 		PF00749
(tRNA-synt_1c)
PF03950
(tRNA-synt_1c_C) 		4 SER A 114
HIS A 212
GLU A  88
TYR A 112
 None
 1.22A 5x7rB-4p2bA:
undetectable		 5x7rB-4p2bA:
18.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4sli INTRAMOLECULAR
TRANS-SIALIDASE

(Macrobdella
decora) 		PF02973
(Sialidase)
PF13088
(BNR_2) 		4 SER A 714
ARG A 293
GLU A 729
TYR A 713
 None
CNP  A 760 (-3.0A)
None
CNP  A 760 (-4.0A)
 1.19A 5x7rB-4sliA:
3.0		 5x7rB-4sliA:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4tkc MANNOSE RECOGNIZING
LECTIN

(Marasmius
oreades) 		no annotation 4 HIS A   4
ARG A  32
GLU A  30
TYR A   2
 None
 1.09A 5x7rB-4tkcA:
undetectable		 5x7rB-4tkcA:
7.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4x28 ACYL-COA
DEHYDROGENASE

(Mycobacterium
tuberculosis) 		PF00441
(Acyl-CoA_dh_1)
PF02770
(Acyl-CoA_dh_M)
PF02771
(Acyl-CoA_dh_N) 		4 SER A   4
ARG A  13
GLU A  10
TYR A   5
 None
 1.36A 5x7rB-4x28A:
1.7		 5x7rB-4x28A:
16.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b47 2-OXOACID--FERREDOXI
N OXIDOREDUCTASE
ALPHA SUBUNIT

(Sulfurisphaera
tokodaii) 		PF01558
(POR)
PF01855
(POR_N)
PF17147
(PFOR_II) 		4 SER A 415
HIS A 381
ARG A  38
TYR A 414
 None
 1.38A 5x7rB-5b47A:
undetectable		 5x7rB-5b47A:
17.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b47 2-OXOACID--FERREDOXI
N OXIDOREDUCTASE
ALPHA SUBUNIT

(Sulfurisphaera
tokodaii) 		PF01558
(POR)
PF01855
(POR_N)
PF17147
(PFOR_II) 		4 TRP A 329
HIS A 470
ARG A 444
TYR A 465
 None
 1.20A 5x7rB-5b47A:
undetectable		 5x7rB-5b47A:
17.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b48 2-OXOACID--FERREDOXI
N OXIDOREDUCTASE
ALPHA SUBUNIT

(Sulfurisphaera
tokodaii) 		PF01558
(POR)
PF01855
(POR_N) 		4 TRP A 329
HIS A 470
ARG A 444
TYR A 465
 None
 1.23A 5x7rB-5b48A:
undetectable		 5x7rB-5b48A:
19.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5cgl ADENOSINE
MONOPHOSPHATE-PROTEI
N TRANSFERASE NMFIC

(Neisseria
meningitidis) 		PF02661
(Fic) 		4 TRP A 135
SER A 182
GLU A 186
TYR A 185
 None
None
PEG  A 201 (-3.9A)
None
 1.47A 5x7rB-5cglA:
undetectable		 5x7rB-5cglA:
9.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ggg PROTEIN
O-LINKED-MANNOSE
BETA-1,2-N-ACETYLGLU
COSAMINYLTRANSFERASE
1

(Homo sapiens) 		PF03071
(GNT-I)
PF15711
(ILEI) 		4 TRP A 206
SER A 182
ARG A 129
TYR A 152
 None
 1.27A 5x7rB-5gggA:
2.8		 5x7rB-5gggA:
17.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mwl INOSITOL-PENTAKISPHO
SPHATE 2-KINASE

(Mus musculus) 		PF06090
(Ins_P5_2-kin) 		4 SER A 454
HIS A 152
GLU A 334
TYR A 450
 None
 1.28A 5x7rB-5mwlA:
undetectable		 5x7rB-5mwlA:
16.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ohs -

(-) 		no annotation 4 TRP A 452
HIS A 520
GLU A 270
TYR A 315
 NSQ  A 709 (-4.9A)
NSQ  A 709 (-3.9A)
NSQ  A 709 (-2.6A)
NSQ  A 709 ( 4.8A)
 1.31A 5x7rB-5ohsA:
22.3		 5x7rB-5ohsA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5uqj U6 SNRNA
PHOSPHODIESTERASE

(Saccharomyces
cerevisiae) 		PF09749
(HVSL) 		4 SER A 284
HIS A 283
ARG A 286
TYR A 277
 None
None
ACT  A 307 (-3.5A)
None
 1.33A 5x7rB-5uqjA:
undetectable		 5x7rB-5uqjA:
10.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5w99 PBTD

(Planobispora
rosea) 		no annotation 4 HIS A 311
ARG A 202
GLU A 198
TYR A 201
 None
 1.05A 5x7rB-5w99A:
1.0		 5x7rB-5w99A:
5.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5x7s GLYCOSIDE HYDROLASE
FAMILY 31
ALPHA-GLUCOSIDASE

(Paenibacillus
sp. 598K) 		PF01055
(Glyco_hydro_31)
PF16338
(DUF4968)
PF16990
(CBM_35)
PF17137
(DUF5110) 		6 TRP A1148
SER A1189
HIS A1191
ARG A1220
GLU A1222
TYR A1261
 None
 0.30A 5x7rB-5x7sA:
56.2		 5x7rB-5x7sA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6am0 KLLA0F23980P

(Kluyveromyces
lactis) 		no annotation 4 TRP A  49
HIS A 194
ARG A 147
GLU A 151
 6VQ  A 302 (-3.4A)
6VQ  A 302 (-4.0A)
None
None
 1.37A 5x7rB-6am0A:
undetectable		 5x7rB-6am0A:
5.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6bog RNA
POLYMERASE-ASSOCIATE
D PROTEIN RAPA

(Escherichia
coli) 		no annotation 4 TRP A  67
SER A  63
HIS A  64
ARG A  98
 None
 1.11A 5x7rB-6bogA:
undetectable		 5x7rB-6bogA:
4.75