SIMILAR PATTERNS OF AMINO ACIDS FOR 5VLM_F_CVIF301_0

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1atj PEROXIDASE C1A

(Armoracia
rusticana) 		PF00141
(peroxidase) 		5 ALA A 165
GLY A 168
SER A 167
LEU A 250
ASP A 222
 None
None
HEM  A 350 ( 3.7A)
None
CA  A 351 (-3.3A)
 1.49A 5vlmF-1atjA:
0.0		 5vlmF-1atjA:
18.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1e5m BETA KETOACYL ACYL
CARRIER PROTEIN
SYNTHASE II

(Synechocystis
sp. PCC 6803) 		PF00109
(ketoacyl-synt)
PF02801
(Ketoacyl-synt_C) 		5 MET A 266
ALA A 168
GLY A 170
SER A 171
LEU A 410
 None
 1.40A 5vlmF-1e5mA:
0.0		 5vlmF-1e5mA:
18.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1gxn PECTATE LYASE

(Cellvibrio
japonicus) 		PF09492
(Pec_lyase) 		5 GLN A 361
GLY A 386
GLU A 384
ASP A 389
PHE A 436
 None
 1.39A 5vlmF-1gxnA:
1.9		 5vlmF-1gxnA:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1i36 CONSERVED
HYPOTHETICAL PROTEIN
MTH1747

(Methanothermobacter
thermautotrophicus) 		PF03807
(F420_oxidored)
PF09130
(DUF1932) 		5 MET A 229
ALA A 157
GLY A 153
ASP A  86
PHE A 107
 None
 1.36A 5vlmF-1i36A:
undetectable		 5vlmF-1i36A:
23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1mg7 EARLY SWITCH PROTEIN
XOL-1 2.2K SPLICE
FORM

(Caenorhabditis
elegans) 		PF09108
(Xol-1_N)
PF09109
(Xol-1_GHMP-like) 		5 ALA A 181
GLY A 185
SER A 186
GLU A 188
LEU A 349
 None
 1.30A 5vlmF-1mg7A:
0.6		 5vlmF-1mg7A:
19.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1o60 2-DEHYDRO-3-DEOXYPHO
SPHOOCTONATE
ALDOLASE

(Haemophilus
influenzae) 		PF00793
(DAHP_synth_1) 		5 GLY A 228
SER A 227
CYH A 166
ASP A 167
PHE A 184
 None
 1.44A 5vlmF-1o60A:
undetectable		 5vlmF-1o60A:
20.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qgj PEROXIDASE N

(Arabidopsis
thaliana) 		PF00141
(peroxidase) 		5 ALA A 160
GLY A 163
SER A 162
LEU A 245
ASP A 217
 None
None
HEM  A1350 (-3.4A)
None
CA  A2002 (-3.3A)
 1.47A 5vlmF-1qgjA:
0.0		 5vlmF-1qgjA:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qo4 PEROXIDASE

(Arabidopsis
thaliana) 		PF00141
(peroxidase) 		5 ALA A 164
GLY A 167
SER A 166
LEU A 249
ASP A 221
 None
None
HEM  A 374 ( 3.9A)
None
CA  A 376 (-3.4A)
 1.45A 5vlmF-1qo4A:
0.0		 5vlmF-1qo4A:
21.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rzm PHOSPHO-2-DEHYDRO-3-
DEOXYHEPTONATE
ALDOLASE

(Thermotoga
maritima) 		PF00793
(DAHP_synth_1) 		5 GLN A 189
SER A 220
GLU A 222
LEU A 194
CYH A 235
 None
 1.36A 5vlmF-1rzmA:
undetectable		 5vlmF-1rzmA:
21.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1szs 4-AMINOBUTYRATE
AMINOTRANSFERASE

(Escherichia
coli) 		PF00202
(Aminotran_3) 		5 GLN A 242
ALA A  51
GLY A  49
LEU A 388
CYH A  33
 EDO  A1232 (-3.3A)
None
EDO  A1223 (-3.5A)
None
None
 1.42A 5vlmF-1szsA:
0.0		 5vlmF-1szsA:
19.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1u60 PROBABLE GLUTAMINASE
YBAS

(Escherichia
coli) 		PF04960
(Glutaminase) 		5 MET A 238
GLY A 261
SER A  66
GLU A  65
PHE A  62
 None
 1.42A 5vlmF-1u60A:
undetectable		 5vlmF-1u60A:
23.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bp5 CLATHRIN COAT
ASSEMBLY PROTEIN
AP50

(Rattus
norvegicus) 		PF00928
(Adap_comp_sub) 		5 ALA M 395
GLY M 426
GLU M 391
LEU M 178
PHE M 390
 None
 1.46A 5vlmF-2bp5M:
undetectable		 5vlmF-2bp5M:
18.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2cuy MALONYL COA-[ACYL
CARRIER PROTEIN]
TRANSACYLASE

(Thermus
thermophilus) 		PF00698
(Acyl_transf_1) 		5 MET A  45
GLY A 269
SER A 270
GLU A 267
LEU A  63
 None
 1.33A 5vlmF-2cuyA:
undetectable		 5vlmF-2cuyA:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2cuy MALONYL COA-[ACYL
CARRIER PROTEIN]
TRANSACYLASE

(Thermus
thermophilus) 		PF00698
(Acyl_transf_1) 		5 MET A  45
GLY A 269
SER A 270
GLU A 267
PHE A   6
 None
 1.41A 5vlmF-2cuyA:
undetectable		 5vlmF-2cuyA:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2dvl ACYL-COA
DEHYDROGENASE

(Thermus
thermophilus) 		PF00441
(Acyl-CoA_dh_1)
PF02770
(Acyl-CoA_dh_M)
PF02771
(Acyl-CoA_dh_N) 		5 ALA A 243
GLY A 245
GLU A  73
LEU A  71
ASP A  78
 None
 1.46A 5vlmF-2dvlA:
undetectable		 5vlmF-2dvlA:
21.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ef4 ARGINASE

(Thermus
thermophilus) 		PF00491
(Arginase) 		5 MET A 247
ALA A 251
GLY A 254
SER A 253
LEU A 205
 None
 1.44A 5vlmF-2ef4A:
undetectable		 5vlmF-2ef4A:
21.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2kfv FK506-BINDING
PROTEIN 3

(Homo sapiens) 		no annotation 5 GLN A  33
SER A  36
GLU A  37
LEU A  39
ASP A  76
 None
 1.43A 5vlmF-2kfvA:
undetectable		 5vlmF-2kfvA:
19.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2lxj COLD SHOCK-LIKE
PROTEIN CSPLA

(Listeria
monocytogenes) 		PF00313
(CSD) 		5 GLN A  45
ALA A  46
GLY A   4
LEU A  41
ASP A  25
 None
 1.45A 5vlmF-2lxjA:
undetectable		 5vlmF-2lxjA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2vpq ACETYL-COA
CARBOXYLASE

(Staphylococcus
aureus) 		PF00289
(Biotin_carb_N)
PF02785
(Biotin_carb_C)
PF02786
(CPSase_L_D2) 		5 GLN A 211
GLY A 214
GLU A 268
LEU A 311
TYR A 217
 None
 1.49A 5vlmF-2vpqA:
undetectable		 5vlmF-2vpqA:
19.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xf4 HYDROXYACYLGLUTATHIO
NE HYDROLASE

(Salmonella
enterica) 		PF00753
(Lactamase_B) 		5 MET A  96
ALA A  92
GLY A  89
LEU A  59
ASP A  83
 PG4  A1212 ( 3.9A)
PG4  A1212 (-3.7A)
None
None
None
 1.30A 5vlmF-2xf4A:
undetectable		 5vlmF-2xf4A:
23.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xut PROTON/PEPTIDE
SYMPORTER FAMILY
PROTEIN

(Shewanella
oneidensis) 		PF00854
(PTR2) 		5 MET A 349
GLY A 160
SER A 161
LEU A 346
PHE A  26
 None
 1.35A 5vlmF-2xutA:
undetectable		 5vlmF-2xutA:
16.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3fgb UNCHARACTERIZED
PROTEIN Q89ZH8_BACTN

(Bacteroides
thetaiotaomicron) 		PF10282
(Lactonase) 		5 ALA A 297
GLY A 284
SER A 283
GLU A 252
CYH A 346
 None
 1.04A 5vlmF-3fgbA:
undetectable		 5vlmF-3fgbA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hfw PROTEIN
ADP-RIBOSYLARGININE
HYDROLASE

(Homo sapiens) 		PF03747
(ADP_ribosyl_GH) 		5 ALA A 135
GLY A 159
SER A 158
GLU A 157
LEU A  83
 None
 1.15A 5vlmF-3hfwA:
1.0		 5vlmF-3hfwA:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hfw PROTEIN
ADP-RIBOSYLARGININE
HYDROLASE

(Homo sapiens) 		PF03747
(ADP_ribosyl_GH) 		5 MET A  59
ALA A 135
GLY A 159
SER A 158
GLU A 157
 None
 1.48A 5vlmF-3hfwA:
1.0		 5vlmF-3hfwA:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hfw PROTEIN
ADP-RIBOSYLARGININE
HYDROLASE

(Homo sapiens) 		PF03747
(ADP_ribosyl_GH) 		5 MET A  59
GLY A 159
SER A 158
GLU A 157
LEU A  83
 None
 1.33A 5vlmF-3hfwA:
1.0		 5vlmF-3hfwA:
21.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3igf ALL4481 PROTEIN

(Nostoc sp. PCC
7120) 		PF02374
(ArsA_ATPase) 		5 ALA A 238
GLY A 242
GLU A 146
LEU A 142
ASP A 211
 None
 1.36A 5vlmF-3igfA:
1.5		 5vlmF-3igfA:
19.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kh1 PREDICTED
METAL-DEPENDENT
PHOSPHOHYDROLASE

(Magnetospirillum
magnetotacticum) 		PF13023
(HD_3) 		5 ALA A  58
GLY A 176
SER A 177
GLU A 174
LEU A 180
 None
 1.26A 5vlmF-3kh1A:
undetectable		 5vlmF-3kh1A:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kh1 PREDICTED
METAL-DEPENDENT
PHOSPHOHYDROLASE

(Magnetospirillum
magnetotacticum) 		PF13023
(HD_3) 		5 ALA A  58
SER A 177
GLU A 174
LEU A 180
ASP A 137
 None
 1.36A 5vlmF-3kh1A:
undetectable		 5vlmF-3kh1A:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kkj AMINE OXIDASE,
FLAVIN-CONTAINING

(Pseudomonas
syringae group
genomosp. 3) 		PF01593
(Amino_oxidase)
PF13450
(NAD_binding_8) 		5 ALA A 312
GLY A 316
SER A 315
GLU A 318
TYR A 298
 FAD  A 401 (-3.6A)
None
None
None
None
 1.46A 5vlmF-3kkjA:
undetectable		 5vlmF-3kkjA:
22.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m7h PUTIDACIN L1

(Pseudomonas
putida) 		PF01453
(B_lectin) 		5 ALA A 150
GLY A 152
SER A 153
GLU A 154
ASP A 204
 None
 1.29A 5vlmF-3m7hA:
undetectable		 5vlmF-3m7hA:
22.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mwc MANDELATE
RACEMASE/MUCONATE
LACTONIZING PROTEIN

(Kosmotoga
olearia) 		PF02746
(MR_MLE_N)
PF13378
(MR_MLE_C) 		5 GLY A 108
SER A  52
GLU A  51
ASP A 115
PHE A 322
 None
 1.41A 5vlmF-3mwcA:
undetectable		 5vlmF-3mwcA:
19.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3r0o CARNITINYL-COA
DEHYDRATASE

(Mycobacterium
avium) 		PF00378
(ECH_1) 		5 ALA A 114
GLY A 118
SER A 119
LEU A 138
PHE A  94
 None
 1.50A 5vlmF-3r0oA:
undetectable		 5vlmF-3r0oA:
24.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3s5k FALCILYSIN

(Plasmodium
falciparum) 		PF00675
(Peptidase_M16)
PF05193
(Peptidase_M16_C)
PF08367
(M16C_assoc) 		5 MET A 260
ALA A 368
SER A 366
LEU A 255
ASP A 446
 None
 1.31A 5vlmF-3s5kA:
undetectable		 5vlmF-3s5kA:
8.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3scy HYPOTHETICAL
BACTERIAL
6-PHOSPHOGLUCONOLACT
ONASE

(Bacteroides
fragilis) 		PF10282
(Lactonase) 		5 ALA A 298
GLY A 285
SER A 284
GLU A 253
CYH A 347
 None
None
None
UNL  A 385 ( 4.9A)
None
 1.06A 5vlmF-3scyA:
undetectable		 5vlmF-3scyA:
20.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ttk POLYAMINE TRANSPORT
PROTEIN

(Pseudomonas
aeruginosa) 		PF13416
(SBP_bac_8) 		5 ALA A 283
GLY A  76
SER A  75
LEU A  70
ASP A  58
 None
 1.24A 5vlmF-3ttkA:
undetectable		 5vlmF-3ttkA:
19.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3zlb PHOSPHOGLYCERATE
KINASE

(Streptococcus
pneumoniae) 		PF00162
(PGK) 		5 GLY A 378
SER A 380
GLU A 382
LEU A 384
ASP A 207
 None
GOL  A1404 ( 4.7A)
None
None
ANP  A1401 ( 4.9A)
 1.44A 5vlmF-3zlbA:
undetectable		 5vlmF-3zlbA:
18.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3zx1 OXIDOREDUCTASE,
PUTATIVE

(Campylobacter
jejuni) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		5 ALA A 402
GLY A 504
SER A 411
LEU A 406
TYR A 493
 None
 1.32A 5vlmF-3zx1A:
undetectable		 5vlmF-3zx1A:
16.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4a5g ANIONIC PEROXIDASE

(Raphanus
sativus) 		PF00141
(peroxidase) 		5 ALA A 166
GLY A 169
SER A 168
LEU A 251
ASP A 223
 None
None
HEM  A1307 (-3.6A)
None
CA  A1309 (-3.3A)
 1.42A 5vlmF-4a5gA:
undetectable		 5vlmF-4a5gA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4atq 4-AMINOBUTYRATE
TRANSAMINASE

(Paenarthrobacter
aurescens) 		PF00202
(Aminotran_3) 		5 MET A 386
ALA A  74
GLY A 296
SER A  77
LEU A 434
 None
 1.32A 5vlmF-4atqA:
undetectable		 5vlmF-4atqA:
18.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bs9 TRUD

(uncultured
Prochloron sp.
06037A) 		PF02624
(YcaO) 		5 ALA A 254
GLY A 193
SER A 194
ASP A 166
TYR A 167
 None
 1.40A 5vlmF-4bs9A:
undetectable		 5vlmF-4bs9A:
14.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gp1 POLYPRENYL
SYNTHETASE

(Pyrobaculum
calidifontis) 		PF00348
(polyprenyl_synt) 		5 ALA A 256
GLY A 251
GLU A 155
LEU A 274
ASP A 229
 None
 1.44A 5vlmF-4gp1A:
undetectable		 5vlmF-4gp1A:
21.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4grs PHOSPHO-2-DEHYDRO-3-
DEOXYHEPTONATE
ALDOLASE,
2-DEHYDRO-3-DEOXYPHO
SPHOHEPTONATE
ALDOLASE

(Pyrococcus
furiosus;
Thermotoga
maritima) 		PF00793
(DAHP_synth_1) 		5 GLN A 189
SER A 220
GLU A 222
LEU A 194
CYH A 235
 None
 1.36A 5vlmF-4grsA:
undetectable		 5vlmF-4grsA:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4i0o PROTEIN ELYS

(Mus musculus) 		PF16687
(ELYS-bb) 		5 GLN A  53
ALA A  22
GLY A  24
GLU A  27
LEU A  34
 None
 1.21A 5vlmF-4i0oA:
undetectable		 5vlmF-4i0oA:
16.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ixa RESPONSE REGULATOR
SAER

(Staphylococcus
epidermidis) 		PF00486
(Trans_reg_C) 		5 ALA A 191
GLU A 180
LEU A 178
ASP A 186
TYR A 185
 None
 1.30A 5vlmF-4ixaA:
2.2		 5vlmF-4ixaA:
16.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4j5u SERINE
HYDROXYMETHYLTRANSFE
RASE

(Rickettsia
rickettsii) 		PF00464
(SHMT) 		5 ALA A 347
GLY A 360
SER A 359
ASP A 307
TYR A 306
 None
 1.46A 5vlmF-4j5uA:
2.3		 5vlmF-4j5uA:
18.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4jgf GAMMA-CRYSTALLIN D

(Homo sapiens) 		PF00030
(Crystall) 		5 GLN A 142
GLY A  70
LEU A  53
CYH A  32
ASP A  73
 None
 1.37A 5vlmF-4jgfA:
undetectable		 5vlmF-4jgfA:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kmr TRANSCRIPTIONAL
REGULATOR, LACI
FAMILY

(Sanguibacter
keddieii) 		PF13377
(Peripla_BP_3) 		5 ALA A 131
GLY A 153
GLU A 154
LEU A 156
ASP A 162
 None
 1.34A 5vlmF-4kmrA:
undetectable		 5vlmF-4kmrA:
21.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ldn PURINE NUCLEOSIDE
PHOSPHORYLASE
DEOD-TYPE

(Aliivibrio
fischeri) 		PF01048
(PNP_UDP_1) 		5 MET A 225
ALA A 229
GLU A 137
LEU A 142
TYR A 132
 None
 1.32A 5vlmF-4ldnA:
undetectable		 5vlmF-4ldnA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4o6z SERINE
HYDROXYMETHYLTRANSFE
RASE

(Plasmodium
falciparum) 		PF00464
(SHMT) 		5 GLY A 127
SER A 184
LEU A 327
CYH A 180
ASP A 208
 None
None
None
None
PLP  A 701 (-2.7A)
 1.46A 5vlmF-4o6zA:
2.0		 5vlmF-4o6zA:
17.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ozv ALGINATE LYASE

(Pseudomonas
aeruginosa) 		PF05426
(Alginate_lyase) 		5 MET A  95
ALA A 147
GLY A 149
SER A 150
TYR A  36
 None
 1.20A 5vlmF-4ozvA:
1.4		 5vlmF-4ozvA:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4pf1 PEPTIDASE
S15/COCE/NOND

(Thaumarchaeota
archaeon SCGC
AB-539-E09) 		PF02129
(Peptidase_S15)
PF08530
(PepX_C) 		5 GLN A 558
GLU A 376
LEU A 290
ASP A 506
PHE A 563
 None
 1.50A 5vlmF-4pf1A:
undetectable		 5vlmF-4pf1A:
15.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qi4 CELLOBIOSE
DEHYDROGENASE

(Crassicarpon
hotsonii) 		PF00732
(GMC_oxred_N)
PF00734
(CBM_1)
PF05199
(GMC_oxred_C) 		5 ALA A 504
GLY A 510
SER A 506
GLU A 507
LEU A 636
 None
 1.43A 5vlmF-4qi4A:
undetectable		 5vlmF-4qi4A:
16.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qi6 CELLOBIOSE
DEHYDROGENASE

(Crassicarpon
hotsonii) 		PF00732
(GMC_oxred_N)
PF00734
(CBM_1)
PF05199
(GMC_oxred_C)
PF16010
(CDH-cyt) 		5 ALA A 504
GLY A 510
SER A 506
GLU A 507
LEU A 636
 None
 1.30A 5vlmF-4qi6A:
undetectable		 5vlmF-4qi6A:
12.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rt7 RECEPTOR-TYPE
TYROSINE-PROTEIN
KINASE FLT3

(Homo sapiens) 		PF07714
(Pkinase_Tyr) 		5 MET A 665
GLY A 798
GLU A 800
ASP A 870
PHE A 936
 P30  A1001 ( 3.7A)
None
None
None
None
 1.50A 5vlmF-4rt7A:
undetectable		 5vlmF-4rt7A:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4u3j PROTEIN STU2

(Saccharomyces
cerevisiae) 		no annotation 5 GLY C 522
SER C 525
GLU C 524
LEU C 529
PHE C 523
 None
 1.36A 5vlmF-4u3jC:
1.8		 5vlmF-4u3jC:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4u83 ACYL-COA
DEHYDROGENASE

(Brucella
abortus) 		PF00441
(Acyl-CoA_dh_1)
PF02770
(Acyl-CoA_dh_M)
PF02771
(Acyl-CoA_dh_N) 		5 ALA A 248
GLY A 250
GLU A  73
LEU A  71
ASP A  78
 None
 1.39A 5vlmF-4u83A:
undetectable		 5vlmF-4u83A:
20.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4u8h CRYPTOCHROME-2

(Mus musculus) 		PF00875
(DNA_photolyase)
PF03441
(FAD_binding_7) 		5 GLY A 413
SER A 414
LEU A 418
TYR A 168
PHE A 313
 None
 1.50A 5vlmF-4u8hA:
1.5		 5vlmF-4u8hA:
17.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4v1u LYND

(Lyngbya
aestuarii) 		PF02624
(YcaO) 		5 ALA A 247
GLY A 187
SER A 188
ASP A 160
TYR A 161
 None
 1.34A 5vlmF-4v1uA:
undetectable		 5vlmF-4v1uA:
13.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4yff SERINE/THREONINE-PRO
TEIN KINASE TNNI3K

(Homo sapiens) 		PF07714
(Pkinase_Tyr) 		5 GLY A 573
GLU A 575
LEU A 580
ASP A 647
PHE A 712
 None
 1.23A 5vlmF-4yffA:
undetectable		 5vlmF-4yffA:
19.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5aog CATIONIC PEROXIDASE
SPC4

(Sorghum bicolor) 		PF00141
(peroxidase) 		5 ALA A 206
GLY A 209
SER A 208
LEU A 285
ASP A 257
 None
None
None
None
CA  A1342 (-3.2A)
 1.50A 5vlmF-5aogA:
undetectable		 5vlmF-5aogA:
23.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b0s LIN0857 PROTEIN

(Listeria
innocua) 		PF04041
(Glyco_hydro_130) 		5 ALA A 337
GLY A 330
LEU A  45
CYH A 251
PHE A 314
 None
None
None
None
BMA  A 401 (-3.9A)
 1.41A 5vlmF-5b0sA:
undetectable		 5vlmF-5b0sA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5dm3 L-GLUTAMINE
SYNTHETASE

(Chromohalobacter
salexigens) 		PF00120
(Gln-synt_C) 		5 ALA A 407
GLY A 410
SER A 411
LEU A 414
ASP A 424
 None
 1.30A 5vlmF-5dm3A:
undetectable		 5vlmF-5dm3A:
19.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gtk BETAINE-ALDEHYDE
DEHYDROGENASE

(Bacillus cereus) 		PF00171
(Aldedh) 		5 MET A 339
ALA A 324
GLY A 368
GLU A 370
LEU A 329
 None
 1.48A 5vlmF-5gtkA:
undetectable		 5vlmF-5gtkA:
18.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5hf4 DISKS LARGE HOMOLOG
4

(Rattus
norvegicus) 		PF00595
(PDZ) 		5 GLN A 374
ALA A 370
GLY A 330
GLU A 331
PHE A 400
 None
 1.27A 5vlmF-5hf4A:
undetectable		 5vlmF-5hf4A:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5jsc PUTATIVE ACYL-COA
DEHYDROGENASE

(Paraburkholderia
xenovorans) 		PF00441
(Acyl-CoA_dh_1)
PF02770
(Acyl-CoA_dh_M)
PF02771
(Acyl-CoA_dh_N) 		5 ALA A 110
GLY A 107
SER A 108
LEU A 124
ASP A 177
 None
 1.50A 5vlmF-5jscA:
undetectable		 5vlmF-5jscA:
19.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mu5 UNCHARACTERIZED
PROTEIN

(Magnetospirillum
magneticum) 		no annotation 5 GLN A 141
GLY A 120
SER A 119
GLU A 118
LEU A  74
 None
 1.26A 5vlmF-5mu5A:
4.1		 5vlmF-5mu5A:
15.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5o3z SORBITOL-6-PHOSPHATE
DEHYDROGENASE

(Erwinia
amylovora) 		no annotation 5 ALA A  25
GLY A  21
GLU A  20
TYR A 227
PHE A  17
 None
 1.49A 5vlmF-5o3zA:
undetectable		 5vlmF-5o3zA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5twt PEROXIDASE PVI9

(Panicum
virgatum) 		PF00141
(peroxidase) 		5 ALA A 162
GLY A 165
SER A 164
LEU A 239
ASP A 211
 None
None
HEM  A 301 (-3.0A)
None
CA  A 302 (-3.3A)
 1.47A 5vlmF-5twtA:
undetectable		 5vlmF-5twtA:
19.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vlg REGULATORY PROTEIN
TETR

([Enterobacter]
lignolyticus) 		no annotation 9 MET A  67
GLY A  88
SER A  89
GLU A  90
LEU A  94
CYH A 160
ASP A 163
TYR A 166
PHE A 178
 MGR  A 300 (-4.6A)
MGR  A 300 ( 2.9A)
MGR  A 300 ( 4.8A)
MGR  A 300 (-4.1A)
MGR  A 300 ( 4.7A)
MGR  A 300 (-2.8A)
MGR  A 300 (-3.5A)
MGR  A 300 (-3.0A)
MGR  A 300 (-3.1A)
 0.86A 5vlmF-5vlgA:
29.2		 5vlmF-5vlgA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vlg REGULATORY PROTEIN
TETR

([Enterobacter]
lignolyticus) 		no annotation 10 MET A  67
MET A  68
ALA A  86
GLY A  88
GLU A  90
LEU A  94
CYH A 160
ASP A 163
TYR A 166
PHE A 178
 MGR  A 300 (-4.6A)
None
None
MGR  A 300 ( 2.9A)
MGR  A 300 (-4.1A)
MGR  A 300 ( 4.7A)
MGR  A 300 (-2.8A)
MGR  A 300 (-3.5A)
MGR  A 300 (-3.0A)
MGR  A 300 (-3.1A)
 0.75A 5vlmF-5vlgA:
29.2		 5vlmF-5vlgA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wrp PYRUVATE KINASE

(Mycobacterium
tuberculosis) 		no annotation 5 ALA A  86
GLY A 148
GLU A 147
LEU A 131
ASP A 125
 None
 1.40A 5vlmF-5wrpA:
undetectable		 5vlmF-5wrpA:
18.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xtc NADH DEHYDROGENASE
[UBIQUINONE] 1 ALPHA
SUBCOMPLEX SUBUNIT 1
NADH DEHYDROGENASE
[UBIQUINONE] 1 ALPHA
SUBCOMPLEX SUBUNIT
13

(Homo sapiens;
Homo sapiens) 		PF15879
(MWFE)
PF06212
(GRIM-19) 		5 SER S  46
GLU S  49
LEU S  47
TYR W 143
PHE W 140
 None
None
None
None
PEE  W 201 (-3.5A)
 1.29A 5vlmF-5xtcS:
undetectable		 5vlmF-5xtcS:
17.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6bka NITRONATE
MONOOXYGENASE

(Cyberlindnera
mrakii) 		no annotation 5 MET A 289
ALA A 292
GLY A 295
SER A 294
LEU A 298
 None
 1.46A 5vlmF-6bkaA:
undetectable		 5vlmF-6bkaA:
undetectable