SIMILAR PATTERNS OF AMINO ACIDS FOR 5VLM_A_CVIA301_0

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1a0d XYLOSE ISOMERASE

(Geobacillus
stearothermophilus) 		PF01261
(AP_endonuc_2) 		5 MET A 357
ALA A 352
LEU A  90
ILE A  92
PHE A  50
 None
 1.45A 5vlmA-1a0dA:
undetectable		 5vlmA-1a0dA:
18.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1bxk PROTEIN
(DTDP-GLUCOSE
4,6-DEHYDRATASE)

(Escherichia
coli) 		PF16363
(GDP_Man_Dehyd) 		5 ALA A 240
GLU A 247
LEU A 312
ILE A 308
CYH A 187
 None
None
None
None
NAD  A 380 (-3.3A)
 1.23A 5vlmA-1bxkA:
undetectable		 5vlmA-1bxkA:
20.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1dce PROTEIN (RAB
GERANYLGERANYLTRANSF
ERASE ALPHA SUBUNIT)

(Rattus
norvegicus) 		PF01239
(PPTA)
PF07711
(RabGGT_insert) 		5 ALA A 524
GLU A 557
LEU A 559
ILE A 565
CYH A 546
 None
 1.15A 5vlmA-1dceA:
2.0		 5vlmA-1dceA:
17.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1evs ONCOSTATIN M

(Homo sapiens) 		PF01291
(LIF_OSM) 		5 GLN A 112
ALA A 114
GLU A 106
LEU A 108
ILE A  37
 None
 1.31A 5vlmA-1evsA:
0.1		 5vlmA-1evsA:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1gy8 UDP-GALACTOSE
4-EPIMERASE

(Trypanosoma
brucei) 		PF01370
(Epimerase) 		5 MET A 129
ALA A  94
LEU A 125
ILE A 122
CYH A 197
 None
 1.40A 5vlmA-1gy8A:
1.6		 5vlmA-1gy8A:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1hvy THYMIDYLATE SYNTHASE

(Homo sapiens) 		PF00303
(Thymidylat_synt) 		5 MET A 179
LEU A 161
ILE A 165
ASP A 290
PHE A 291
 None
 1.49A 5vlmA-1hvyA:
undetectable		 5vlmA-1hvyA:
19.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1i7o 4-HYDROXYPHENYLACETA
TE DEGRADATION
BIFUNCTIONAL
ISOMERASE/DECARBOXYL
ASE

(Escherichia
coli) 		PF01557
(FAA_hydrolase) 		5 ALA A 377
SER A 380
LEU A 385
ILE A 283
TYR A 302
 None
 1.46A 5vlmA-1i7oA:
undetectable		 5vlmA-1i7oA:
18.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1in8 HOLLIDAY JUNCTION
DNA HELICASE RUVB

(Thermotoga
maritima) 		PF05491
(RuvB_C)
PF05496
(RuvB_N) 		5 MET A  93
ALA A 125
LEU A 106
ILE A 108
PHE A 171
 None
 1.47A 5vlmA-1in8A:
0.6		 5vlmA-1in8A:
24.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1iy1 ATP-DEPENDENT
METALLOPROTEASE FTSH

(Thermus
thermophilus) 		PF00004
(AAA) 		5 MET A 298
ALA A 208
LEU A 194
ILE A 321
ASP A 324
 None
 1.41A 5vlmA-1iy1A:
undetectable		 5vlmA-1iy1A:
22.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ji0 ABC TRANSPORTER

(Thermotoga
maritima) 		PF00005
(ABC_tran) 		5 MET A 162
ALA A 148
LEU A 160
ILE A 184
ASP A 117
 None
 1.15A 5vlmA-1ji0A:
0.0		 5vlmA-1ji0A:
20.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1omo ALANINE
DEHYDROGENASE

(Archaeoglobus
fulgidus) 		PF02423
(OCD_Mu_crystall) 		5 ALA A 182
SER A 186
GLU A 208
LEU A 191
ILE A 213
 ALA  A 182 ( 0.0A)
SER  A 186 ( 0.0A)
GLU  A 208 ( 0.6A)
LEU  A 191 ( 0.6A)
ILE  A 213 ( 0.7A)
 1.50A 5vlmA-1omoA:
0.0		 5vlmA-1omoA:
20.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ph5 TELOMERE-BINDING
PROTEIN ALPHA
SUBUNIT

(Sterkiella nova) 		PF02765
(POT1) 		5 SER A 464
GLU A 466
LEU A 468
ILE A 378
TYR A 434
 None
 1.20A 5vlmA-1ph5A:
undetectable		 5vlmA-1ph5A:
16.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1su1 HYPOTHETICAL PROTEIN
YFCE

(Escherichia
coli) 		PF12850
(Metallophos_2) 		5 GLN A 179
ALA A 178
SER A 167
ILE A 182
PHE A   6
 None
 1.48A 5vlmA-1su1A:
undetectable		 5vlmA-1su1A:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1v9v KIAA0561 PROTEIN

(Homo sapiens) 		PF08926
(DUF1908) 		5 GLN A  13
ALA A  12
GLU A  20
ILE A 102
TYR A  65
 None
 1.18A 5vlmA-1v9vA:
undetectable		 5vlmA-1v9vA:
21.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1vgq FORMYL-COENZYME A
TRANSFERASE

(Oxalobacter
formigenes) 		PF02515
(CoA_transf_3) 		5 MET A 288
ALA A 286
ILE A 320
TYR A 281
ASP A 315
 None
 1.47A 5vlmA-1vgqA:
undetectable		 5vlmA-1vgqA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wle SERYL-TRNA
SYNTHETASE

(Bos taurus) 		PF00587
(tRNA-synt_2b) 		5 GLN A 421
ALA A 297
SER A 295
LEU A 427
ASP A 293
 None
 1.28A 5vlmA-1wleA:
2.2		 5vlmA-1wleA:
17.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2btd PTS-DEPENDENT
DIHYDROXYACETONE
KINASE

(Escherichia
coli) 		PF02734
(Dak2) 		5 GLN A 190
ALA A 194
GLU A  22
LEU A  29
PHE A  19
 None
 1.38A 5vlmA-2btdA:
undetectable		 5vlmA-2btdA:
21.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2fpg SUCCINYL-COA LIGASE
[GDP-FORMING]
ALPHA-CHAIN,
MITOCHONDRIAL

(Sus scrofa) 		PF00549
(Ligase_CoA)
PF02629
(CoA_binding) 		5 ALA A 169
GLU A 299
ILE A 212
TYR A  11
PHE A 300
 None
 1.24A 5vlmA-2fpgA:
undetectable		 5vlmA-2fpgA:
18.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2gop TRILOBED PROTEASE

(Pyrococcus
furiosus) 		PF07676
(PD40) 		5 ALA A 268
GLU A 281
LEU A 287
ILE A 304
PHE A 280
 None
 1.33A 5vlmA-2gopA:
undetectable		 5vlmA-2gopA:
19.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ji9 OXALYL-COA
DECARBOXYLASE

(Oxalobacter
formigenes) 		PF00205
(TPP_enzyme_M)
PF02775
(TPP_enzyme_C)
PF02776
(TPP_enzyme_N) 		5 MET A 247
SER A 261
ILE A 218
TYR A 302
CYH A 273
 ADP  A1556 (-4.1A)
None
None
None
None
 1.22A 5vlmA-2ji9A:
undetectable		 5vlmA-2ji9A:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2n9v DERMONECROTIC TOXIN

(Pasteurella
multocida) 		PF11647
(MLD) 		5 GLN A  61
SER A  60
GLU A  58
ILE A  27
ASP A  55
 None
 1.50A 5vlmA-2n9vA:
undetectable		 5vlmA-2n9vA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2nzt HEXOKINASE-2

(Homo sapiens) 		PF00349
(Hexokinase_1)
PF03727
(Hexokinase_2) 		5 ALA A  82
ILE A 189
CYH A 133
ASP A 200
PHE A 199
 None
 1.15A 5vlmA-2nztA:
undetectable		 5vlmA-2nztA:
12.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2of3 ZYG-9

(Caenorhabditis
elegans) 		no annotation 5 MET A 653
ALA A 667
SER A 670
LEU A 605
ASP A 676
 None
 1.50A 5vlmA-2of3A:
undetectable		 5vlmA-2of3A:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ohw YUEI PROTEIN

(Bacillus
subtilis) 		PF07997
(DUF1694) 		5 GLN A  44
GLU A  57
LEU A  40
ILE A 105
TYR A  74
 None
 1.36A 5vlmA-2ohwA:
undetectable		 5vlmA-2ohwA:
21.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qdx FERREDOXIN REDUCTASE

(Pseudomonas
aeruginosa) 		PF00175
(NAD_binding_1)
PF00970
(FAD_binding_6) 		5 ALA A 120
SER A  54
LEU A  99
TYR A 132
PHE A  32
 FAD  A 400 (-3.6A)
FAD  A 400 (-3.7A)
None
None
None
 1.43A 5vlmA-2qdxA:
undetectable		 5vlmA-2qdxA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qza SECRETED EFFECTOR
PROTEIN

(Salmonella
enterica) 		PF13599
(Pentapeptide_4)
PF13979
(SopA_C)
PF13981
(SopA) 		5 MET A 761
GLN A 762
ALA A 758
LEU A 773
ILE A 776
 None
 1.50A 5vlmA-2qzaA:
undetectable		 5vlmA-2qzaA:
14.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qza SECRETED EFFECTOR
PROTEIN

(Salmonella
enterica) 		PF13599
(Pentapeptide_4)
PF13979
(SopA_C)
PF13981
(SopA) 		5 MET A 761
GLN A 762
ALA A 758
LEU A 777
ILE A 776
 None
 1.41A 5vlmA-2qzaA:
undetectable		 5vlmA-2qzaA:
14.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2r7a BACTERIAL HEME
BINDING PROTEIN

(Shigella
dysenteriae) 		PF01497
(Peripla_BP_2) 		5 ALA A 192
GLU A 268
LEU A 189
TYR A 201
ASP A 265
 None
None
None
HEM  A 600 (-4.2A)
None
 1.50A 5vlmA-2r7aA:
undetectable		 5vlmA-2r7aA:
23.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xec PUTATIVE MALEATE
ISOMERASE

(Nocardia
farcinica) 		no annotation 5 MET A  21
ALA A 217
SER A 111
LEU A  73
ILE A 225
 None
 1.50A 5vlmA-2xecA:
undetectable		 5vlmA-2xecA:
23.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ygk NURA

(Sulfolobus
solfataricus) 		PF09376
(NurA) 		5 MET A 112
ALA A 114
SER A 118
LEU A 119
ILE A  57
 None
 1.42A 5vlmA-2ygkA:
undetectable		 5vlmA-2ygkA:
20.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2zns GLUTAMATE RECEPTOR,
IONOTROPIC KAINATE 1

(Homo sapiens) 		PF10613
(Lig_chan-Glu_bd) 		5 GLN A 739
SER A 524
GLU A 723
LEU A 743
PHE A 678
 None
None
GLU  A 301 ( 2.8A)
None
None
 1.50A 5vlmA-2znsA:
undetectable		 5vlmA-2znsA:
20.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ez6 PLASMID PARTITION
PROTEIN A

(Escherichia
coli) 		PF13614
(AAA_31) 		5 MET A 133
ALA A 387
LEU A 129
ILE A 111
TYR A 105
 None
 1.37A 5vlmA-3ez6A:
undetectable		 5vlmA-3ez6A:
19.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jsa HOMOSERINE
DEHYDROGENASE

(Thermoplasma
volcanium) 		PF00742
(Homoserine_dh)
PF03447
(NAD_binding_3) 		5 ALA A 216
SER A 269
GLU A 257
LEU A 254
ILE A 271
 None
 1.45A 5vlmA-3jsaA:
undetectable		 5vlmA-3jsaA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kzw CYTOSOL
AMINOPEPTIDASE

(Staphylococcus
aureus) 		PF00883
(Peptidase_M17)
PF02789
(Peptidase_M17_N) 		5 GLN A  85
SER A  83
ILE A  90
TYR A  58
ASP A 118
 None
 1.49A 5vlmA-3kzwA:
1.4		 5vlmA-3kzwA:
15.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lov PROTOPORPHYRINOGEN
OXIDASE

(Exiguobacterium
sibiricum) 		PF01593
(Amino_oxidase) 		5 ALA A  36
GLU A 275
LEU A  33
ILE A   8
TYR A 441
 FAD  A 500 (-3.6A)
None
None
None
None
 1.49A 5vlmA-3lovA:
undetectable		 5vlmA-3lovA:
19.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lwt PHOSPHOINOSITIDE
PHOSPHATASE SAC1

(Saccharomyces
cerevisiae) 		PF02383
(Syja_N) 		5 ALA X  70
GLU X 163
LEU X 165
ILE X 179
TYR X 128
 None
 1.46A 5vlmA-3lwtX:
undetectable		 5vlmA-3lwtX:
16.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m7d TOPOISOMERASE V

(Methanopyrus
kandleri) 		PF13412
(HTH_24) 		5 ALA A 318
GLU A 309
LEU A 301
ILE A 307
TYR A 331
 None
 1.34A 5vlmA-3m7dA:
undetectable		 5vlmA-3m7dA:
19.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mmp RNA-DIRECTED RNA
POLYMERASE BETA
CHAIN

(Escherichia
virus Qbeta) 		no annotation 5 ALA G 337
LEU G 138
ILE G 139
TYR G 327
CYH G 287
 None
 1.25A 5vlmA-3mmpG:
undetectable		 5vlmA-3mmpG:
15.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nvl 2,3-BISPHOSPHOGLYCER
ATE-INDEPENDENT
PHOSPHOGLYCERATE
MUTASE

(Trypanosoma
brucei) 		PF01676
(Metalloenzyme)
PF06415
(iPGM_N) 		5 MET A 535
SER A 337
GLU A 339
LEU A 341
ILE A 348
 None
 1.12A 5vlmA-3nvlA:
1.7		 5vlmA-3nvlA:
15.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3otd TRNA(HIS)
GUANYLYLTRANSFERASE

(Homo sapiens) 		PF04446
(Thg1)
PF14413
(Thg1C) 		5 MET A  97
ALA A 101
LEU A  65
ILE A  68
TYR A 143
 None
 1.28A 5vlmA-3otdA:
undetectable		 5vlmA-3otdA:
21.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ouk PROBABLE CONSERVED
TRANSMEMBRANE
PROTEIN

(Mycobacterium
tuberculosis) 		no annotation 5 MET A 256
ALA A 236
SER A 239
LEU A 252
ASP A 179
 None
 1.49A 5vlmA-3oukA:
undetectable		 5vlmA-3oukA:
23.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3pqu TRANSFERRIN BINDING
PROTEIN B

(Actinobacillus
suis) 		PF01298
(TbpB_B_D)
PF17483
(TbpB_C)
PF17484
(TbpB_A) 		5 ALA A 330
SER A 238
GLU A 239
LEU A 253
ILE A 273
 None
 1.41A 5vlmA-3pquA:
undetectable		 5vlmA-3pquA:
15.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qxl RAS-SPECIFIC GUANINE
NUCLEOTIDE-RELEASING
FACTOR RALGPS1

(Homo sapiens) 		PF00617
(RasGEF) 		5 GLN A  57
ALA A  55
LEU A  60
ILE A  63
ASP A 250
 None
 1.17A 5vlmA-3qxlA:
undetectable		 5vlmA-3qxlA:
23.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3rh3 UNCHARACTERIZED
DUF3829-LIKE PROTEIN

(Bacteroides
thetaiotaomicron) 		no annotation 5 GLN A 162
SER A 201
LEU A 205
ILE A 217
PHE A 257
 None
 1.43A 5vlmA-3rh3A:
1.8		 5vlmA-3rh3A:
23.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3t58 SULFHYDRYL OXIDASE 1

(Mus musculus) 		PF00085
(Thioredoxin)
PF04777
(Evr1_Alr) 		5 ALA A 341
GLU A 383
LEU A 311
ILE A 314
PHE A 374
 None
 1.29A 5vlmA-3t58A:
undetectable		 5vlmA-3t58A:
16.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ue3 SEPTUM FORMATION,
PENICILLIN BINDING
PROTEIN 3,
PEPTIDOGLYCAN
SYNTHETASE

(Acinetobacter
sp. ATCC 27244) 		PF00905
(Transpeptidase)
PF03717
(PBP_dimer) 		5 GLN A 461
SER A 420
LEU A 475
ILE A 300
PHE A 424
 None
 1.50A 5vlmA-3ue3A:
undetectable		 5vlmA-3ue3A:
16.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3w6q TYROSINASE

(Aspergillus
oryzae) 		PF00264
(Tyrosinase) 		5 GLN A  50
GLU A  44
LEU A  46
ILE A 114
TYR A   3
 None
 1.45A 5vlmA-3w6qA:
undetectable		 5vlmA-3w6qA:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4alb PHENOLIC ACID
DECARBOXYLASE PADC

(Bacillus
subtilis) 		PF05870
(PA_decarbox) 		5 MET A  75
SER A   7
GLU A 136
LEU A 133
TYR A  13
 None
 1.18A 5vlmA-4albA:
undetectable		 5vlmA-4albA:
16.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4c2f CARBOXY-TERMINAL
PROCESSING PROTEASE
CTPB

(Bacillus
subtilis) 		PF01471
(PG_binding_1)
PF03572
(Peptidase_S41)
PF13180
(PDZ_2) 		5 MET A 177
GLU A 137
LEU A 141
ILE A 127
PHE A 131
 None
 1.04A 5vlmA-4c2fA:
undetectable		 5vlmA-4c2fA:
18.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ci6 PROTEIN KINASE YOPO

(Yersinia
enterocolitica) 		PF00069
(Pkinase)
PF09632
(Rac1) 		5 ALA B 316
SER B 320
LEU B 324
ILE B 268
TYR B 177
 None
 1.42A 5vlmA-4ci6B:
3.5		 5vlmA-4ci6B:
14.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4dyx FERRITIN HEAVY CHAIN

(Homo sapiens) 		PF00210
(Ferritin) 		5 ALA A  66
GLU A 140
LEU A 114
ILE A 133
TYR A  12
 None
 1.46A 5vlmA-4dyxA:
undetectable		 5vlmA-4dyxA:
21.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fwt ELONGATION FACTOR
TS, ELONGATION
FACTOR TU, LINKER, Q
BETA REPLICASE

(Escherichia
coli;
Escherichia
virus Qbeta) 		PF00009
(GTP_EFTU)
PF00889
(EF_TS)
PF03143
(GTP_EFTU_D3)
PF03144
(GTP_EFTU_D2)
PF03431
(RNA_replicase_B) 		5 ALA A1031
LEU A 832
ILE A 833
TYR A1021
CYH A 981
 None
 1.28A 5vlmA-4fwtA:
2.5		 5vlmA-4fwtA:
10.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4g6z GLUTAMATE-TRNA
LIGASE

(Burkholderia
thailandensis) 		PF00749
(tRNA-synt_1c) 		5 ALA A  25
LEU A  41
ILE A  43
TYR A 187
ASP A  57
 None
 1.46A 5vlmA-4g6zA:
undetectable		 5vlmA-4g6zA:
16.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4k48 LEUCINE--TRNA LIGASE

(Streptococcus
pneumoniae) 		PF13603
(tRNA-synt_1_2) 		5 ALA A 309
GLU A 242
LEU A 267
TYR A 327
PHE A 234
 None
 1.49A 5vlmA-4k48A:
undetectable		 5vlmA-4k48A:
23.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lq0 LAGLIDADG HOMING
ENDONUCLEASE

(Leptographium
truncatum) 		PF00961
(LAGLIDADG_1) 		5 MET A  49
ALA A  21
LEU A  47
ILE A  60
PHE A  96
 None
CA  A 402 (-4.9A)
None
None
None
 1.26A 5vlmA-4lq0A:
2.2		 5vlmA-4lq0A:
20.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4mx6 TRAP-TYPE
C4-DICARBOXYLATE:H+
SYMPORT SYSTEM
SUBSTRATE-BINDING
COMPONENT DCTP

(Shewanella
oneidensis) 		PF03480
(DctP) 		5 ALA A  55
SER A 273
GLU A 272
LEU A 270
ILE A 266
 None
 1.23A 5vlmA-4mx6A:
undetectable		 5vlmA-4mx6A:
19.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4n18 D-ISOMER SPECIFIC
2-HYDROXYACID
DEHYDROGENASE FAMILY
PROTEIN

(Klebsiella
pneumoniae) 		PF02826
(2-Hacid_dh_C) 		5 ALA A  39
SER A  58
LEU A  61
ILE A  64
CYH A  10
 None
 1.34A 5vlmA-4n18A:
undetectable		 5vlmA-4n18A:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4n5c CARGO-TRANSPORT
PROTEIN YPP1

(Saccharomyces
cerevisiae) 		no annotation 5 LEU A  95
ILE A  99
TYR A 190
ASP A  42
PHE A  34
 None
 1.44A 5vlmA-4n5cA:
1.9		 5vlmA-4n5cA:
13.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4nxi UNCHARACTERIZED
PROTEIN

(Mycobacterium
tuberculosis) 		PF01323
(DSBA) 		5 ALA A  68
SER A  46
LEU A 136
ILE A  76
PHE A  15
 None
 1.26A 5vlmA-4nxiA:
undetectable		 5vlmA-4nxiA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ofz TREHALOSE-PHOSPHATAS
E

(Brugia malayi) 		no annotation 5 MET A 238
ALA A 242
SER A 244
LEU A 485
ILE A 484
 None
 1.12A 5vlmA-4ofzA:
undetectable		 5vlmA-4ofzA:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4oir DNA-DIRECTED RNA
POLYMERASE SUBUNIT
ALPHA

(Thermus
thermophilus) 		PF01000
(RNA_pol_A_bac)
PF01193
(RNA_pol_L) 		5 MET A 140
ALA A 130
GLU A  84
LEU A  82
ILE A  79
 None
 1.26A 5vlmA-4oirA:
undetectable		 5vlmA-4oirA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4p58 CATECHOL
O-METHYLTRANSFERASE

(Mus musculus) 		PF01596
(Methyltransf_3) 		5 MET A 145
GLN A  57
ALA A  60
LEU A  53
ILE A  52
 None
 1.48A 5vlmA-4p58A:
undetectable		 5vlmA-4p58A:
21.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rae HISTIDINOL-PHOSPHATE
AMINOTRANSFERASE

(Mycobacterium
tuberculosis) 		PF00155
(Aminotran_1_2) 		5 GLN A 108
ALA A 112
ILE A 133
ASP A 201
PHE A 170
 None
 1.33A 5vlmA-4raeA:
undetectable		 5vlmA-4raeA:
19.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ck3 SRX DOMAIN

(Chaetomium
thermophilum) 		PF04086
(SRP-alpha_N) 		5 ALA A 100
SER A 104
GLU A 108
LEU A 105
PHE A 110
 None
 1.39A 5vlmA-5ck3A:
undetectable		 5vlmA-5ck3A:
21.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5cxd HOLO-[ACYL-CARRIER-P
ROTEIN] SYNTHASE

(Staphylococcus
aureus) 		PF01648
(ACPS) 		5 GLN A  22
ALA A  17
LEU A  25
ILE A  29
PHE A  38
 None
 1.50A 5vlmA-5cxdA:
undetectable		 5vlmA-5cxdA:
18.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5e7q ACYL-COA SYNTHETASE

(Streptomyces
platensis) 		PF00501
(AMP-binding)
PF13193
(AMP-binding_C) 		5 MET A 224
ALA A  72
LEU A 188
ILE A 189
ASP A 163
 None
 1.36A 5vlmA-5e7qA:
undetectable		 5vlmA-5e7qA:
16.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5e9u GLYCOSYLTRANSFERASE
GTF1

(Streptococcus
gordonii) 		PF00534
(Glycos_transf_1) 		5 MET A 411
ALA A 481
SER A 477
LEU A 420
ILE A 433
 None
 1.34A 5vlmA-5e9uA:
undetectable		 5vlmA-5e9uA:
18.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fmg PROTEASOME SUBUNIT
ALPHA TYPE 2,
PUTATIVE

(Plasmodium
falciparum) 		PF00227
(Proteasome)
PF10584
(Proteasome_A_N) 		5 GLN B 148
SER B 133
ILE B 114
ASP B  82
PHE B  83
 None
 1.43A 5vlmA-5fmgB:
undetectable		 5vlmA-5fmgB:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fsa CYP51 VARIANT1

(Candida
albicans) 		PF00067
(p450) 		5 MET A 189
GLN A 192
ALA A 313
SER A 316
LEU A 320
 None
 1.19A 5vlmA-5fsaA:
undetectable		 5vlmA-5fsaA:
16.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mrw POTASSIUM-TRANSPORTI
NG ATPASE
POTASSIUM-BINDING
SUBUNIT

(Escherichia
coli) 		PF03814
(KdpA) 		5 MET A 384
MET A 383
LEU A 151
ILE A 152
ASP A 169
 None
 1.28A 5vlmA-5mrwA:
1.3		 5vlmA-5mrwA:
14.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5olc GALACTONATE
DEHYDRATASE

(Zobellia
galactanivorans) 		no annotation 5 MET A 165
ALA A 180
LEU A 191
ILE A 216
TYR A 199
 None
 1.49A 5vlmA-5olcA:
undetectable		 5vlmA-5olcA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ufb TN4-22

(Petromyzon
marinus) 		no annotation 5 GLN A   8
ALA A  28
LEU A  23
ILE A  44
PHE A  52
 None
 1.44A 5vlmA-5ufbA:
undetectable		 5vlmA-5ufbA:
20.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vlg REGULATORY PROTEIN
TETR

([Enterobacter]
lignolyticus) 		no annotation 8 MET A  67
GLN A  71
SER A  89
LEU A  94
ILE A  98
TYR A 118
ASP A 175
PHE A 178
 MGR  A 300 (-4.6A)
MGR  A 300 ( 4.1A)
MGR  A 300 ( 4.8A)
MGR  A 300 ( 4.7A)
MGR  A 300 (-3.1A)
None
MGR  A 300 ( 4.3A)
MGR  A 300 (-3.1A)
 1.11A 5vlmA-5vlgA:
30.0		 5vlmA-5vlgA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vlg REGULATORY PROTEIN
TETR

([Enterobacter]
lignolyticus) 		no annotation 11 MET A  67
MET A  68
GLN A  71
ALA A  86
GLU A  90
LEU A  94
ILE A  98
TYR A 118
CYH A 160
ASP A 175
PHE A 178
 MGR  A 300 (-4.6A)
None
MGR  A 300 ( 4.1A)
None
MGR  A 300 (-4.1A)
MGR  A 300 ( 4.7A)
MGR  A 300 (-3.1A)
None
MGR  A 300 (-2.8A)
MGR  A 300 ( 4.3A)
MGR  A 300 (-3.1A)
 0.81A 5vlmA-5vlgA:
30.0		 5vlmA-5vlgA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wtk CRISPR-ASSOCIATED
ENDORIBONUCLEASE
C2C2

(Leptotrichia
shahii) 		no annotation 5 MET A1192
SER A1320
GLU A1323
ILE A1184
PHE A1322
 None
A  B  25 ( 4.9A)
A  B  26 ( 3.4A)
None
None
 1.45A 5vlmA-5wtkA:
0.9		 5vlmA-5wtkA:
8.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ygu DIAMINOPIMELATE
EPIMERASE

(Escherichia
coli) 		no annotation 5 ALA A  81
GLU A  49
LEU A  46
ILE A  62
CYH A  73
 None
 1.34A 5vlmA-5yguA:
undetectable		 5vlmA-5yguA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6at7 PHENYLALANINE
AMMONIA-LYASE

(Sorghum bicolor) 		no annotation 5 GLU A 652
LEU A 682
ILE A 677
TYR A 452
CYH A 670
 None
 1.39A 5vlmA-6at7A:
undetectable		 5vlmA-6at7A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6auj THYMIDYLATE SYNTHASE

(Elizabethkingia
anophelis) 		PF00303
(Thymidylat_synt) 		5 MET A 194
ALA A 190
SER A 188
LEU A  67
ILE A  64
 None
 1.47A 5vlmA-6aujA:
undetectable		 5vlmA-6aujA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6auj THYMIDYLATE SYNTHASE

(Elizabethkingia
anophelis) 		PF00303
(Thymidylat_synt) 		5 MET A 195
ALA A 190
SER A 188
LEU A  67
ILE A  64
 None
 1.48A 5vlmA-6aujA:
undetectable		 5vlmA-6aujA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ax8 METHIONINE-TRNA
LIGASE

(Mycobacterium
tuberculosis) 		no annotation 5 MET A 417
GLU A 396
LEU A 394
ILE A 458
TYR A 450
 None
 1.45A 5vlmA-6ax8A:
undetectable		 5vlmA-6ax8A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6d7t TRANSIENT RECEPTOR
POTENTIAL CATION
CHANNEL SUBFAMILY V
MEMBER 6

(Homo sapiens) 		no annotation 5 MET A 603
SER A 291
GLU A 282
LEU A 293
ILE A 296
 FZ4  A 801 ( 3.5A)
None
None
None
None
 1.27A 5vlmA-6d7tA:
undetectable		 5vlmA-6d7tA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6dzs HOMOSERINE
DEHYDROGENASE

(Mycolicibacterium
hassiacum) 		no annotation 5 ALA A 193
SER A 186
GLU A 184
LEU A 182
ILE A 167
 None
 1.47A 5vlmA-6dzsA:
undetectable		 5vlmA-6dzsA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6eu9 RETINOIC ACID
RECEPTOR

(Platynereis
dumerilii) 		no annotation 5 ALA A 363
LEU A 394
ILE A 398
TYR A 454
PHE A 430
 None
 1.37A 5vlmA-6eu9A:
2.9		 5vlmA-6eu9A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6fbt LYTIC MUREIN
TRANSGLYCOSYLASE

(Pseudomonas
aeruginosa) 		no annotation 5 ALA A 448
GLU A 440
LEU A 401
ILE A 396
ASP A 437
 None
 1.19A 5vlmA-6fbtA:
undetectable		 5vlmA-6fbtA:
undetectable