SIMILAR PATTERNS OF AMINO ACIDS FOR 5G4B_A_PZEA1268

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2snv SINDBIS VIRUS COAT
PROTEIN

(Sindbis virus) 		PF00944
(Peptidase_S3) 		4 MET A 132
GLU A 133
TYR A 180
TRP A 247
 None
 0.30A 5g4bA-2snvA:
27.5		 5g4bA-2snvA:
75.32
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4uon CAPSID PROTEASE

(Aura virus) 		PF00944
(Peptidase_S3) 		4 MET A 135
GLU A 136
TYR A 183
TRP A 250
 None
 0.63A 5g4bA-4uonA:
27.5		 5g4bA-4uonA:
100.00