SIMILAR PATTERNS OF AMINO ACIDS FOR 5AMK_B_EF2B151_1
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1bru | ELASTASE (Sus scrofa) |
PF00089(Trypsin) | 4 | ASN P 200PRO P 198TRP P 27TRP P 207 | None | 1.47A | 5amkB-1bruP:0.0 | 5amkB-1bruP:20.51 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1gz5 | ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (Escherichiacoli) |
PF00982(Glyco_transf_20) | 4 | PRO A 158PHE A 88TRP A 85TYR A 265 | None | 1.47A | 5amkB-1gz5A:0.0 | 5amkB-1gz5A:15.64 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1lxy | ARGININE DEIMINASE (Mycoplasmaarginini) |
PF02274(Amidinotransf) | 4 | ASN A 260PHE A 294TRP A 295TYR A 297 | None | 0.99A | 5amkB-1lxyA:undetectable | 5amkB-1lxyA:13.38 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1xxr | MANNOSE-BINDINGLECTIN (Morus nigra) |
PF01419(Jacalin) | 4 | ASN A 86PRO A 85PHE A 84TYR A 121 | None | 1.41A | 5amkB-1xxrA:0.0 | 5amkB-1xxrA:22.41 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1ygp | YEAST GLYCOGENPHOSPHORYLASE (Saccharomycescerevisiae) |
PF00343(Phosphorylase) | 4 | PRO A 229PHE A 228TRP A 155TYR A 157 | None | 1.45A | 5amkB-1ygpA:0.0 | 5amkB-1ygpA:8.27 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2c7l | PHYCOERYTHROCYANINBETA CHAIN (Mastigocladuslaminosus) |
PF00502(Phycobilisome) | 4 | ASN B 68PRO B 69PHE B 74TYR B 56 | None | 1.26A | 5amkB-2c7lB:undetectable | 5amkB-2c7lB:23.46 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2ocx | NODULATIONFUCOSYLTRANSFERASENODZ (Bradyrhizobiumsp. WM9) |
PF05830(NodZ) | 4 | ASN A 124PRO A 81PHE A 6TYR A 28 | NonePO4 A 332 ( 4.8A)PO4 A 332 (-4.7A)None | 1.17A | 5amkB-2ocxA:undetectable | 5amkB-2ocxA:18.75 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2w61 | GLYCOLIPID-ANCHOREDSURFACE PROTEIN 2 (Saccharomycescerevisiae) |
PF03198(Glyco_hydro_72)PF07983(X8) | 4 | ASN A 141PRO A 145PHE A 189TYR A 155 | None | 1.26A | 5amkB-2w61A:0.0 | 5amkB-2w61A:10.87 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3juu | PORPHYRANASE B (Zobelliagalactanivorans) |
PF00722(Glyco_hydro_16) | 4 | ASN A 261PRO A 262TRP A 260TRP A 172 | None | 1.39A | 5amkB-3juuA:0.0 | 5amkB-3juuA:16.31 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3kie | CAPSID PROTEIN VP1 (Adeno-associateddependoparvovirusA) |
PF00740(Parvo_coat) | 4 | PRO A 308PHE A 638TRP A 619TYR A 352 | None | 1.36A | 5amkB-3kieA:undetectable | 5amkB-3kieA:10.69 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3lpp | SUCRASE-ISOMALTASE (Homo sapiens) |
PF00088(Trefoil)PF01055(Glyco_hydro_31)PF16863(NtCtMGAM_N) | 4 | ASN A 319PRO A 315PHE A 670TYR A 660 | None | 1.49A | 5amkB-3lppA:undetectable | 5amkB-3lppA:9.88 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3ng9 | CAPSID PROTEIN (Adeno-associateddependoparvovirusA) |
PF00740(Parvo_coat) | 4 | PRO A 309PHE A 638TRP A 619TYR A 353 | None | 1.37A | 5amkB-3ng9A:undetectable | 5amkB-3ng9A:11.35 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3nix | FLAVOPROTEIN/DEHYDROGENASE (Cytophagahutchinsonii) |
PF01494(FAD_binding_3) | 4 | PRO A 50PHE A 89TRP A 99TRP A 101 | None | 1.25A | 5amkB-3nixA:undetectable | 5amkB-3nixA:16.09 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3ntt | CAPSID PROTEIN (Adeno-associateddependoparvovirusB) |
PF00740(Parvo_coat) | 4 | PRO A 299PHE A 627TRP A 608TYR A 343 | None | 1.43A | 5amkB-3nttA:undetectable | 5amkB-3nttA:10.74 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3ogr | BETA-GALACTOSIDASE (Trichodermareesei) |
PF01301(Glyco_hydro_35)PF10435(BetaGal_dom2)PF13363(BetaGal_dom3)PF13364(BetaGal_dom4_5) | 4 | PRO A 69PHE A 70TRP A 350TYR A 948 | None | 1.41A | 5amkB-3ogrA:undetectable | 5amkB-3ogrA:8.77 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3ra2 | CAPSID PROTEIN (Adeno-associateddependoparvovirusA) |
PF00740(Parvo_coat) | 4 | PRO A 311PHE A 640TRP A 621TYR A 355 | None | 1.32A | 5amkB-3ra2A:undetectable | 5amkB-3ra2A:13.86 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3shm | CAPSID PROTEIN VP1 (Adeno-associateddependoparvovirusA) |
PF00740(Parvo_coat) | 4 | PRO A 309PHE A 638TRP A 619TYR A 353 | None | 1.38A | 5amkB-3shmA:undetectable | 5amkB-3shmA:13.50 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3ux1 | CAPSID PROTEIN VP1 (Adeno-associateddependoparvovirusA) |
PF00740(Parvo_coat) | 4 | PRO A 310PHE A 638TRP A 619TYR A 354 | None | 1.37A | 5amkB-3ux1A:undetectable | 5amkB-3ux1A:12.68 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3w5n | PUTATIVERHAMNOSIDASE (Streptomycesavermitilis) |
PF05592(Bac_rhamnosid)PF08531(Bac_rhamnosid_N)PF17389(Bac_rhamnosid6H)PF17390(Bac_rhamnosid_C) | 4 | PRO A 628TRP A 347TRP A 380TYR A 350 | None | 1.26A | 5amkB-3w5nA:undetectable | 5amkB-3w5nA:8.14 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4aw7 | GH86ABETA-PORPHYRANASE (Bacteroidesplebeius) |
no annotation | 4 | ASN A 317PRO A 274PHE A 319TYR A 49 | NoneIOD A1704 ( 4.6A)NoneNone | 0.98A | 5amkB-4aw7A:undetectable | 5amkB-4aw7A:11.23 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4ci2 | PROTEIN CEREBLON (Gallus gallus) |
PF02190(LON_substr_bdg)PF03226(Yippee-Mis18) | 5 | ASN B 353PRO B 354TRP B 382TRP B 388TRP B 402 | LVY B1429 (-4.1A)LVY B1429 (-4.7A)LVY B1429 (-3.1A)LVY B1429 (-3.5A)LVY B1429 (-3.7A) | 0.46A | 5amkB-4ci2B:16.3 | 5amkB-4ci2B:16.01 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4iov | CAPSID PROTEIN VP1 (Adeno-associatedvirus) |
PF00740(Parvo_coat) | 4 | PRO A 299PHE A 635TRP A 616TYR A 343 | None | 1.36A | 5amkB-4iovA:undetectable | 5amkB-4iovA:11.41 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4iug | BETA-GALACTOSIDASE A (Aspergillusoryzae) |
PF01301(Glyco_hydro_35)PF10435(BetaGal_dom2)PF13363(BetaGal_dom3)PF13364(BetaGal_dom4_5) | 4 | PRO A 69PHE A 70TRP A 350TYR A 930 | None | 1.39A | 5amkB-4iugA:undetectable | 5amkB-4iugA:8.02 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4oqf | PROTEIN RECA (Mycobacteriumtuberculosis) |
PF00154(RecA) | 4 | ASN A 250PRO A 255PHE A 256TYR A 66 | NoneNoneNoneEDO A 402 (-4.8A) | 1.32A | 5amkB-4oqfA:undetectable | 5amkB-4oqfA:17.67 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4r9g | MBP1 (Caldanaerobiuspolysaccharolyticus) |
PF13416(SBP_bac_8) | 4 | ASN A 391PRO A 194PHE A 394TYR A 399 | MAN A 501 ( 4.9A)NoneNoneNone | 1.47A | 5amkB-4r9gA:undetectable | 5amkB-4r9gA:17.01 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4rso | CAPSID PROTEIN VP1 (Non-humanprimateAdeno-associatedvirus) |
PF00740(Parvo_coat) | 4 | PRO A 310PHE A 638TRP A 619TYR A 354 | None | 1.40A | 5amkB-4rsoA:undetectable | 5amkB-4rsoA:12.41 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 4v30 | CEREBLON ISOFORM 4 (Magnetospirillumgryphiswaldense) |
no annotation | 7 | ASN A 50PRO A 51PHE A 77TRP A 79TRP A 85TRP A 99TYR A 101 | LVY A 151 (-3.8A)LVY A 151 (-4.4A)LVY A 151 (-4.4A)LVY A 151 (-3.2A)LVY A 151 (-3.4A)LVY A 151 (-3.7A)LVY A 151 (-4.7A) | 0.16A | 5amkB-4v30A:22.5 | 5amkB-4v30A:100.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4w5z | CHITINASE 60 (Moritellamarina) |
PF00704(Glyco_hydro_18) | 4 | ASN A 314PRO A 52TRP A 40TRP A 311 | NoneNone CL A 408 (-4.3A)MPD A 402 ( 3.4A) | 1.47A | 5amkB-4w5zA:undetectable | 5amkB-4w5zA:15.65 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4ynu | GLUCOSE OXIDASE,PUTATIVE (Aspergillusflavus) |
PF00732(GMC_oxred_N)PF05199(GMC_oxred_C) | 4 | ASN A 318PHE A 414TRP A 415TYR A 337 | LGC A 602 ( 4.4A)NoneNoneNone | 1.44A | 5amkB-4ynuA:undetectable | 5amkB-4ynuA:12.27 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5huu | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE[UDP-FORMING] (Candidaalbicans) |
PF00982(Glyco_transf_20) | 4 | PRO A 175PHE A 101TRP A 98TYR A 283 | None | 1.44A | 5amkB-5huuA:undetectable | 5amkB-5huuA:12.32 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5hvm | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE(UDP-FORMING) (Aspergillusfumigatus) |
PF00982(Glyco_transf_20) | 4 | PRO A 183PHE A 109TRP A 106TYR A 290 | None | 1.49A | 5amkB-5hvmA:undetectable | 5amkB-5hvmA:13.08 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5hxb | PROTEIN CEREBLON (Homo sapiens) |
no annotation | 5 | ASN Z 351PRO Z 352TRP Z 380TRP Z 386TRP Z 400 | 85C Z 502 (-3.6A)85C Z 502 (-4.4A)85C Z 502 (-3.2A)85C Z 502 (-3.4A)85C Z 502 (-3.7A) | 0.59A | 5amkB-5hxbZ:11.6 | 5amkB-5hxbZ:16.50 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5ihr | PROBABLEBETA-GALACTOSIDASE A (Aspergillusniger) |
PF01301(Glyco_hydro_35)PF10435(BetaGal_dom2)PF13363(BetaGal_dom3)PF13364(BetaGal_dom4_5) | 4 | PRO A 69PHE A 70TRP A 350TYR A 932 | None | 1.41A | 5amkB-5ihrA:undetectable | 5amkB-5ihrA:9.14 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5koh | NITROGENASE FEMOBETA SUBUNIT PROTEINNIFK (Gluconacetobacterdiazotrophicus) |
PF00148(Oxidored_nitro)PF11844(DUF3364) | 4 | ASN B 440PRO B 460PHE B 459TYR B 313 | None | 1.36A | 5amkB-5kohB:undetectable | 5amkB-5kohB:13.49 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5mrt | LYTIC ENDOPEPTIDASEPREPROENZYME (Lysobacter sp.XL1) |
no annotation | 4 | ASN A 65PRO A 64PHE A 63TYR A 198 | NA A 305 (-3.4A)NoneNoneNone | 1.49A | 5amkB-5mrtA:undetectable | 5amkB-5mrtA:21.54 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5v0t | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE(UDP-FORMING) (Paraburkholderiaxenovorans) |
PF00982(Glyco_transf_20) | 4 | PRO A 168PHE A 98TRP A 95TYR A 280 | None | 1.46A | 5amkB-5v0tA:undetectable | 5amkB-5v0tA:13.73 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5x8g | 2-SUCCINYLBENZOATE--COA LIGASE (Bacillussubtilis) |
PF00501(AMP-binding)PF13193(AMP-binding_C) | 4 | ASN A 342PRO A 341PHE A 171TYR A 209 | None | 1.34A | 5amkB-5x8gA:undetectable | 5amkB-5x8gA:14.96 |