SIMILAR PATTERNS OF AMINO ACIDS FOR 4YVV_A_GBMA402_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1c9w CHO REDUCTASE

(Cricetulus
griseus) 		PF00248
(Aldo_ket_red) 		5 TYR A  48
TRP A  79
HIS A 110
ASN A 160
TYR A 209
 NAP  A 350 (-4.8A)
None
NAP  A 350 (-4.0A)
NAP  A 350 (-3.2A)
NAP  A 350 (-3.5A)
 0.26A 4yvvA-1c9wA:
46.1		 4yvvA-1c9wA:
46.73
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1q5m PROSTAGLANDIN-E2
9-REDUCTASE

(Oryctolagus
cuniculus) 		PF00248
(Aldo_ket_red) 		6 TYR A  24
TYR A  55
TRP A  86
HIS A 117
ASN A 167
TYR A 216
 None
NDP  A1003 (-4.9A)
None
NDP  A1003 (-4.3A)
NDP  A1003 (-3.4A)
NDP  A1003 (-3.2A)
 0.44A 4yvvA-1q5mA:
51.7		 4yvvA-1q5mA:
77.02
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1qwk ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C1

(Caenorhabditis
elegans) 		PF00248
(Aldo_ket_red) 		6 TYR A  52
TRP A  83
HIS A 114
ASN A 154
TYR A 201
PHE A 299
 None
 0.68A 4yvvA-1qwkA:
40.1		 4yvvA-1qwkA:
39.12
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1ral 3-ALPHA-HYDROXYSTERO
ID DEHYDROGENASE

(Rattus
norvegicus) 		PF00248
(Aldo_ket_red) 		6 LEU A  54
TYR A  55
TRP A  86
HIS A 117
ASN A 167
TYR A 216
 None
 0.66A 4yvvA-1ralA:
41.4		 4yvvA-1ralA:
70.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1z9a NAD(P)H-DEPENDENT
D-XYLOSE REDUCTASE

([Candida]
tenuis) 		PF00248
(Aldo_ket_red) 		5 TYR A  52
TRP A  83
HIS A 114
ASN A 170
TYR A 217
 None
None
NAD  A1350 (-4.4A)
NAD  A1350 (-3.3A)
NAD  A1350 (-3.2A)
 0.22A 4yvvA-1z9aA:
41.7		 4yvvA-1z9aA:
39.22
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2bgs ALDOSE REDUCTASE

(Hordeum vulgare) 		PF00248
(Aldo_ket_red) 		5 TYR A  60
TRP A  90
HIS A 121
ASN A 167
TYR A 214
 BCT  A1322 ( 4.4A)
None
BCT  A1322 ( 3.9A)
NDP  A1321 (-3.3A)
NDP  A1321 (-3.3A)
 0.21A 4yvvA-2bgsA:
39.7		 4yvvA-2bgsA:
34.44
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2fvl ALDO-KETO REDUCTASE
FAMILY 1, MEMBER C4

(Homo sapiens) 		PF00248
(Aldo_ket_red) 		6 TYR A  24
LEU A  54
TYR A  55
TRP A  86
HIS A 117
ASN A 167
 None
None
NAP  A1001 (-4.7A)
None
NAP  A1001 (-4.4A)
NAP  A1001 (-3.1A)
 0.17A 4yvvA-2fvlA:
51.9		 4yvvA-2fvlA:
84.21
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2ipf (3(17)ALPHA-HYDROXYS
TEROID
DEHYDROGENASE)

(Mus musculus) 		PF00248
(Aldo_ket_red) 		5 TYR A  55
TRP A  86
HIS A 117
ASN A 167
TYR A 216
 FFA  A   3 ( 4.5A)
None
FFA  A   3 ( 4.1A)
NAP  A   1 (-3.3A)
NAP  A   1 (-3.5A)
 0.18A 4yvvA-2ipfA:
50.9		 4yvvA-2ipfA:
72.41
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2ipj ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C2

(Homo sapiens) 		PF00248
(Aldo_ket_red) 		6 TYR A  55
TRP A  86
HIS A 117
ASN A 167
TYR A 216
TRP A 227
 FFA  A 325 ( 4.3A)
None
FFA  A 325 ( 3.8A)
NAP  A   1 (-3.1A)
NAP  A   1 (-3.2A)
FFA  A 325 (-3.8A)
 0.47A 4yvvA-2ipjA:
52.2		 4yvvA-2ipjA:
86.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2is7 ALDOSE REDUCTASE

(Homo sapiens) 		PF00248
(Aldo_ket_red) 		5 TYR A  48
TRP A  79
HIS A 110
ASN A 160
TYR A 209
 2CL  A 317 ( 4.5A)
None
2CL  A 317 ( 3.8A)
NAP  A 316 (-3.4A)
NAP  A 316 (-3.2A)
 0.27A 4yvvA-2is7A:
46.5		 4yvvA-2is7A:
48.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3cav 3-OXO-5-BETA-STEROID
4-DEHYDROGENASE

(Homo sapiens) 		PF00248
(Aldo_ket_red) 		5 TYR A  26
TYR A  58
TRP A  89
ASN A 170
TYR A 219
 CI2  A 328 ( 4.0A)
CI2  A 328 ( 4.5A)
None
NAP  A 327 (-3.6A)
NAP  A 327 (-3.4A)
 0.43A 4yvvA-3cavA:
48.2		 4yvvA-3cavA:
55.52
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3h7r ALDO-KETO REDUCTASE

(Arabidopsis
thaliana) 		PF00248
(Aldo_ket_red) 		6 TYR A  24
TYR A  48
TRP A  79
HIS A 110
ASN A 155
TYR A 202
 ACT  A 501 ( 4.0A)
ACT  A 501 ( 4.3A)
None
ACT  A 501 ( 4.0A)
NAP  A 401 (-3.4A)
NAP  A 401 (-3.1A)
 0.40A 4yvvA-3h7rA:
41.0		 4yvvA-3h7rA:
39.71
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3h7u ALDO-KETO REDUCTASE

(Arabidopsis
thaliana) 		PF00248
(Aldo_ket_red) 		5 TYR A  52
TRP A  83
HIS A 114
ASN A 159
TYR A 206
 ACT  A 501 ( 4.4A)
None
ACT  A 501 ( 3.8A)
NAP  A 401 (-3.3A)
NAP  A 401 (-3.2A)
 0.23A 4yvvA-3h7uA:
41.2		 4yvvA-3h7uA:
39.20
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3krb ALDOSE REDUCTASE

(Giardia
intestinalis) 		PF00248
(Aldo_ket_red) 		5 TYR A  40
TRP A  73
HIS A 104
ASN A 156
TYR A 203
 UNX  A 402 (-4.4A)
None
UNX  A 402 (-4.1A)
NAP  A 400 (-3.4A)
NAP  A 400 (-3.2A)
 0.29A 4yvvA-3krbA:
39.0		 4yvvA-3krbA:
36.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ln3 DIHYDRODIOL
DEHYDROGENASE

(Mus musculus) 		PF00248
(Aldo_ket_red) 		6 TYR A  24
TYR A  55
TRP A  86
HIS A 117
ASN A 167
TYR A 216
 MLY  A  25 (-3.6A)
NAD  A 327 ( 4.7A)
None
MRD  A 328 ( 3.9A)
NAD  A 327 (-3.3A)
NAD  A 327 (-3.4A)
 0.38A 4yvvA-3ln3A:
49.7		 4yvvA-3ln3A:
64.71
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3o3r ALDO-KETO REDUCTASE
FAMILY 1, MEMBER B7

(Rattus
norvegicus) 		PF00248
(Aldo_ket_red) 		5 TYR A  49
TRP A  80
HIS A 111
ASN A 161
TYR A 210
 NAP  A 317 (-4.9A)
None
NAP  A 317 (-4.3A)
NAP  A 317 (-3.1A)
NAP  A 317 (-3.3A)
 0.21A 4yvvA-3o3rA:
45.2		 4yvvA-3o3rA:
45.82
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3up8 PUTATIVE
2,5-DIKETO-D-GLUCONI
C ACID REDUCTASE B

(Sinorhizobium
meliloti) 		PF00248
(Aldo_ket_red) 		5 TYR A  47
TRP A  74
HIS A 105
ASN A 136
TYR A 183
 ACT  A 276 (-4.6A)
None
ACT  A 276 (-3.9A)
None
ACT  A 276 (-3.7A)
 0.37A 4yvvA-3up8A:
36.2		 4yvvA-3up8A:
33.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3wbx PUTATIVE
2,5-DIKETO-D-GLUCONI
C ACID REDUCTASE

(Gluconobacter
oxydans) 		PF00248
(Aldo_ket_red) 		5 LEU A  57
TYR A  58
TRP A  81
HIS A 112
ASN A 144
 None
 0.52A 4yvvA-3wbxA:
35.6		 4yvvA-3wbxA:
35.58
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3wcz ALDO-KETO REDUCTASE
2E

(Bombyx mori) 		PF00248
(Aldo_ket_red) 		5 TYR A  58
TRP A  89
HIS A 120
ASN A 159
TYR A 206
 CIT  A 406 ( 3.2A)
None
NAP  A 401 (-4.0A)
NAP  A 401 ( 2.8A)
NAP  A 401 (-3.2A)
 0.23A 4yvvA-3wczA:
42.6		 4yvvA-3wczA:
40.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3wg6 CONJUGATED
POLYKETONE REDUCTASE
C1

(Candida
parapsilosis) 		PF00248
(Aldo_ket_red) 		5 TYR A  60
HIS A 125
ASN A 161
TYR A 211
PHE A 296
 NDP  A3001 (-4.7A)
NDP  A3001 (-4.2A)
NDP  A3001 (-3.1A)
NDP  A3001 (-3.3A)
NDP  A3001 (-3.7A)
 0.57A 4yvvA-3wg6A:
34.2		 4yvvA-3wg6A:
32.84
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4hbk ALDO-KETO REDUCTASE
FAMILY 1, MEMBER B4
(ALDOSE REDUCTASE)

(Schistosoma
japonicum) 		PF00248
(Aldo_ket_red) 		5 TYR A  48
HIS A 110
ASN A 160
TYR A 207
PHE A 293
 None
 0.75A 4yvvA-4hbkA:
43.4		 4yvvA-4hbkA:
39.94
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4hbk ALDO-KETO REDUCTASE
FAMILY 1, MEMBER B4
(ALDOSE REDUCTASE)

(Schistosoma
japonicum) 		PF00248
(Aldo_ket_red) 		5 TYR A  48
TRP A  79
HIS A 110
ASN A 160
TYR A 207
 None
 0.49A 4yvvA-4hbkA:
43.4		 4yvvA-4hbkA:
39.94
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4ijr D-ARABINOSE
DEHYDROGENASE
[NAD(P)+] HEAVY
CHAIN

(Saccharomyces
cerevisiae) 		PF00248
(Aldo_ket_red) 		5 TYR A  71
TRP A 102
HIS A 131
ASN A 193
TYR A 240
 NDP  A 401 (-4.7A)
None
NDP  A 401 (-3.9A)
NDP  A 401 (-3.3A)
NDP  A 401 (-3.3A)
 0.44A 4yvvA-4ijrA:
39.8		 4yvvA-4ijrA:
34.51
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4q3m MGS-M4

(unidentified) 		PF00248
(Aldo_ket_red) 		6 TYR A  48
TRP A  75
HIS A 106
ASN A 137
TYR A 184
PHE A 266
 None
 0.53A 4yvvA-4q3mA:
38.6		 4yvvA-4q3mA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5az0 UNCHARACTERIZED
PROTEIN

(Bombyx mori) 		PF00248
(Aldo_ket_red) 		5 TYR A  75
TRP A 106
HIS A 137
ASN A 176
TYR A 223
 ACT  A 405 (-4.7A)
None
None
None
None
 0.53A 4yvvA-5az0A:
40.3		 4yvvA-5az0A:
33.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dan 2,5-DIKETO-D-GLUCONI
C ACID REDUCTASE

(Thermotoga
maritima) 		PF00248
(Aldo_ket_red) 		5 TYR A  58
TRP A  86
HIS A 117
ASN A 148
TYR A 198
 NAP  A 301 (-4.9A)
None
NAP  A 301 (-4.3A)
NAP  A 301 (-3.5A)
NAP  A 301 (-3.3A)
 0.57A 4yvvA-5danA:
31.9		 4yvvA-5danA:
35.02
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea mays) 		PF00248
(Aldo_ket_red) 		5 TYR A  59
TRP A  89
HIS A 120
ASN A 166
TYR A 213
 6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
6KB  A 401 (-3.5A)
6KB  A 401 (-3.4A)
 0.22A 4yvvA-5jgyA:
39.8		 4yvvA-5jgyA:
37.65
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ket ALDO-KETO REDUCTASE
1

(Coptotermes
gestroi) 		PF00248
(Aldo_ket_red) 		5 TYR A  52
HIS A 114
ASN A 167
TYR A 214
PHE A 314
 NAP  A 400 (-4.8A)
NAP  A 400 (-4.3A)
NAP  A 400 (-3.3A)
NAP  A 400 (-3.6A)
NAP  A 400 (-4.6A)
 0.51A 4yvvA-5ketA:
43.9		 4yvvA-5ketA:
39.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5liy ALDO-KETO REDUCTASE
FAMILY 1 MEMBER B10

(Homo sapiens) 		PF00248
(Aldo_ket_red) 		5 TYR X  49
TRP X  80
HIS X 111
ASN X 161
TYR X 210
 DQP  X 402 ( 4.0A)
None
DQP  X 402 ( 4.1A)
NAP  X 401 (-3.2A)
NAP  X 401 ( 3.1A)
 0.31A 4yvvA-5liyX:
45.5		 4yvvA-5liyX:
46.75
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6f2u ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3

(Homo sapiens) 		no annotation 7 LEU A  54
TYR A  55
TRP A  86
HIS A 117
ASN A 167
TYR A 216
TRP A 227
 None
CJ2  A 402 ( 4.1A)
None
CJ2  A 402 ( 3.8A)
NAP  A 401 ( 3.3A)
NAP  A 401 ( 3.2A)
CJ2  A 402 ( 4.8A)
 1.34A 4yvvA-6f2uA:
52.8		 4yvvA-6f2uA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6f2u ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3

(Homo sapiens) 		no annotation 7 TYR A  24
LEU A  54
TYR A  55
TRP A  86
HIS A 117
ASN A 167
TYR A 216
 CJ2  A 402 (-4.2A)
None
CJ2  A 402 ( 4.1A)
None
CJ2  A 402 ( 3.8A)
NAP  A 401 ( 3.3A)
NAP  A 401 ( 3.2A)
 0.18A 4yvvA-6f2uA:
52.8		 4yvvA-6f2uA:
100.00