SIMILAR PATTERNS OF AMINO ACIDS FOR 4U14_A_0HKA2000_2

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1bix AP ENDONUCLEASE 1

(Homo sapiens) 		PF03372
(Exo_endo_phos) 		4 ASN A 277
LEU A 305
PHE A 266
TYR A 269
 None
 1.38A 4u14A-1bixA:
undetectable		 4u14A-1bixA:
19.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1r4n AMYLOID BETA
PRECURSOR
PROTEIN-BINDING
PROTEIN 1

(Homo sapiens) 		PF00899
(ThiF) 		4 ASN A 517
LEU A 398
PHE A 532
TYR A 161
 None
 1.29A 4u14A-1r4nA:
undetectable		 4u14A-1r4nA:
21.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2cov BETA-1,3-XYLANASE

(Alcaligenes sp.
XY-234) 		PF11606
(AlcCBM31) 		4 ASN D 389
LEU D 436
PHE D 432
TYR D 440
 None
 1.47A 4u14A-2covD:
undetectable		 4u14A-2covD:
11.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2gs8 MEVALONATE
PYROPHOSPHATE
DECARBOXYLASE

(Streptococcus
pyogenes) 		PF00288
(GHMP_kinases_N)
PF08544
(GHMP_kinases_C) 		4 ASN A  13
LEU A 217
PHE A 147
TYR A 161
 None
 1.34A 4u14A-2gs8A:
0.0		 4u14A-2gs8A:
18.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qua EXTRACELLULAR LIPASE

(Serratia
marcescens) 		no annotation 4 ASN A 285
LEU A 323
PHE A 371
TYR A 332
 CA  A 620 (-3.3A)
None
None
None
 1.41A 4u14A-2quaA:
0.0		 4u14A-2quaA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3a98 ENGULFMENT AND CELL
MOTILITY PROTEIN 1

(Homo sapiens) 		PF16457
(PH_12) 		4 ASN B 653
LEU B 638
PHE B 562
TYR B 662
 None
 1.50A 4u14A-3a98B:
0.0		 4u14A-3a98B:
18.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3b46 AMINOTRANSFERASE
BNA3

(Saccharomyces
cerevisiae) 		PF00155
(Aminotran_1_2) 		4 ASN A 205
LEU A 361
PHE A 148
TYR A 407
 LLP  A 271 ( 3.2A)
None
None
None
 1.20A 4u14A-3b46A:
0.0		 4u14A-3b46A:
22.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3h7n NUCLEOPORIN NUP120

(Saccharomyces
cerevisiae) 		PF11715
(Nup160) 		4 ASN A 120
LEU A  60
PHE A  72
TYR A  56
 None
 1.46A 4u14A-3h7nA:
2.7		 4u14A-3h7nA:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3js8 CHOLESTEROL OXIDASE

(Chromobacterium
sp. DS-1) 		PF01565
(FAD_binding_4)
PF09129
(Chol_subst-bind) 		4 ASN A 294
LEU A 330
PHE A 287
TYR A 348
 None
 1.43A 4u14A-3js8A:
0.0		 4u14A-3js8A:
22.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3on7 OXIDOREDUCTASE,
IRON/ASCORBATE
FAMILY

(Shewanella
oneidensis) 		PF03171
(2OG-FeII_Oxy)
PF14226
(DIOX_N) 		4 ASN A  61
LEU A 150
PHE A  68
TYR A  88
 None
 1.17A 4u14A-3on7A:
0.0		 4u14A-3on7A:
21.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wel ALPHA-GLUCOSIDASE

(Beta vulgaris) 		PF01055
(Glyco_hydro_31)
PF13802
(Gal_mutarotas_2)
PF16863
(NtCtMGAM_N) 		4 ASN A 758
LEU A 656
PHE A 724
TYR A 729
 None
None
None
GOL  A1009 (-3.6A)
 1.31A 4u14A-3welA:
undetectable		 4u14A-3welA:
18.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3whd C-TYPE LECTIN DOMAIN
FAMILY 4 MEMBER D

(Homo sapiens) 		PF00059
(Lectin_C) 		4 ASN A 129
LEU A 143
PHE A 134
TYR A  96
 None
 1.42A 4u14A-3whdA:
undetectable		 4u14A-3whdA:
17.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4giz MALTOSE-BINDING
PERIPLASMIC PROTEIN,
UBIQUITIN LIGASE
EA6P: CHIMERIC
PROTEIN
PROTEIN E6

(Alphapapillomavirus
9;
Escherichia
coli;
Homo sapiens) 		PF00518
(E6)
PF01547
(SBP_bac_1) 		4 ASN C 105
LEU A 379
PHE C  69
TYR C  32
 None
 1.49A 4u14A-4gizC:
undetectable		 4u14A-4gizC:
14.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gkf CRISPR SYSTEM CMR
SUBUNIT CMR5

(Pyrococcus
furiosus) 		PF09701
(Cas_Cmr5) 		4 ASN A 148
LEU A 107
PHE A 153
TYR A  25
 None
 1.25A 4u14A-4gkfA:
0.3		 4u14A-4gkfA:
16.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4u16 MUSCARINIC
ACETYLCHOLINE
RECEPTOR
M3,LYSOZYME,MUSCARIN
IC ACETYLCHOLINE
RECEPTOR M3

(Escherichia
virus T4;
Rattus
norvegicus) 		PF00001
(7tm_1)
PF00959
(Phage_lysozyme) 		4 ASN A 152
LEU A 225
PHE A 239
TYR A 506
 None
None
None
3C0  A1202 (-3.7A)
 0.43A 4u14A-4u16A:
36.2		 4u14A-4u16A:
89.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4wts BETA-1,3-GLUCANOSYLT
RANSFERASE

(Rhizomucor
miehei) 		PF00332
(Glyco_hydro_17) 		4 ASN A 152
LEU A 227
PHE A 245
TYR A 212
 BGC  A 303 (-4.1A)
None
BGC  A 303 ( 4.4A)
None
 1.35A 4u14A-4wtsA:
undetectable		 4u14A-4wtsA:
20.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zps MCG133388, ISOFORM
CRA_M

(Mus musculus) 		PF00028
(Cadherin)
PF08266
(Cadherin_2) 		4 ASN A  78
LEU A  23
PHE A  46
TYR A   4
 None
 1.27A 4u14A-4zpsA:
undetectable		 4u14A-4zpsA:
20.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b0n E3 UBIQUITIN-PROTEIN
LIGASE IPAH9.8

(Shigella
flexneri) 		PF12468
(TTSSLRR) 		4 ASN A 214
LEU A 152
PHE A 187
TYR A 186
 None
 1.30A 4u14A-5b0nA:
undetectable		 4u14A-5b0nA:
18.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b3h PROTEIN SCARECROW

(Arabidopsis
thaliana) 		PF03514
(GRAS) 		4 ASN A 374
LEU A 548
PHE A 382
TYR A 625
 None
 1.42A 4u14A-5b3hA:
undetectable		 4u14A-5b3hA:
20.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5cd2 ENDO-1,4-D-GLUCANASE

(Aliivibrio
fischeri) 		PF01270
(Glyco_hydro_8) 		4 ASN A 360
LEU A 271
PHE A  52
TYR A  79
 None
 1.45A 4u14A-5cd2A:
0.0		 4u14A-5cd2A:
21.90
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dsg MUSCARINIC
ACETYLCHOLINE
RECEPTOR
M4,ENDOLYSIN,ENDOLYS
IN,MUSCARINIC
ACETYLCHOLINE
RECEPTOR M4

(Escherichia
virus T4;
Homo sapiens) 		PF00001
(7tm_1)
PF00959
(Phage_lysozyme) 		4 ASN A 117
LEU A 190
PHE A 204
TYR A 416
 OLC  A1208 ( 3.6A)
P6G  A1205 (-4.6A)
None
0HK  A1201 (-4.2A)
 0.31A 4u14A-5dsgA:
41.2		 4u14A-5dsgA:
67.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ewt EXODEOXYRIBONUCLEASE
III XTH

(Sulfolobus
islandicus) 		PF03372
(Exo_endo_phos) 		4 ASN A   7
LEU A 210
PHE A 106
TYR A 214
 None
 1.23A 4u14A-5ewtA:
undetectable		 4u14A-5ewtA:
20.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5j68 ASTROTACTIN-2

(Homo sapiens) 		PF01823
(MACPF) 		4 ASN A 751
LEU A 727
PHE A 756
TYR A 859
 None
 1.39A 4u14A-5j68A:
undetectable		 4u14A-5j68A:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mpd 26S PROTEASOME
REGULATORY SUBUNIT
RPN7

(Saccharomyces
cerevisiae) 		PF01399
(PCI)
PF10602
(RPN7) 		4 ASN R  23
LEU R 154
PHE R 179
TYR R 186
 None
 1.40A 4u14A-5mpdR:
0.0		 4u14A-5mpdR:
21.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5n5d METHYLTRANSFERASE

(Streptomyces
regensis) 		PF01596
(Methyltransf_3) 		4 ASN A 166
LEU A  49
PHE A  67
TYR A  70
 None
BU3  A 301 ( 3.7A)
SAM  A 306 (-4.2A)
None
 1.40A 4u14A-5n5dA:
undetectable		 4u14A-5n5dA:
18.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5opt 40S RIBOSOMAL
PROTEIN S3A-2

(Trypanosoma
cruzi) 		no annotation 4 ASN W  37
LEU W 230
PHE W 102
TYR W 135
 None
 1.45A 4u14A-5optW:
undetectable		 4u14A-5optW:
20.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5szm PCDHGA8 OR
PROTOCADHERIN GAMMA
A8

(Mus musculus) 		PF00028
(Cadherin)
PF08266
(Cadherin_2) 		4 ASN A  78
LEU A  23
PHE A  46
TYR A   4
 None
 1.26A 4u14A-5szmA:
undetectable		 4u14A-5szmA:
22.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5u9e HTH-TYPE
TRANSCRIPTIONAL
ACTIVATOR RHAR

(Bacteria
Latreille et
al. 1825) 		no annotation 4 ASN A  86
LEU A 155
PHE A  66
TYR A  67
 RM4  A 201 (-2.4A)
None
None
None
 1.39A 4u14A-5u9eA:
undetectable		 4u14A-5u9eA:
10.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vc2 SERINE
HYDROXYMETHYLTRANSFE
RASE

(Helicobacter
pylori) 		PF00464
(SHMT) 		4 ASN A  99
LEU A 194
PHE A 171
TYR A 142
 None
 1.41A 4u14A-5vc2A:
undetectable		 4u14A-5vc2A:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vhi 26S PROTEASOME
NON-ATPASE
REGULATORY SUBUNIT 2

(Homo sapiens) 		PF00004
(AAA) 		4 ASN f 371
LEU f 391
PHE f 376
TYR f 751
 None
 1.11A 4u14A-5vhif:
undetectable		 4u14A-5vhif:
18.86