SIMILAR PATTERNS OF AMINO ACIDS FOR 4NJV_D_RITD500_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1bqc PROTEIN
(BETA-MANNANASE)


(Thermobifida
fusca)
PF00150
(Cellulase)
5 GLY A 227
ILE A 195
GLY A 224
ILE A 252
ILE A 240
None
0.84A 4njvC-1bqcA:
0.0
4njvC-1bqcA:
15.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1c4o DNA NUCLEOTIDE
EXCISION REPAIR
ENZYME UVRB


(Thermus
thermophilus)
PF00271
(Helicase_C)
PF04851
(ResIII)
PF12344
(UvrB)
5 GLY A 534
ILE A 406
GLY A  36
PRO A 409
THR A 410
None
1.01A 4njvC-1c4oA:
0.0
4njvC-1c4oA:
9.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1czi CHYMOSIN

(Bos taurus)
PF00026
(Asp)
5 ASP E 215
GLY E 217
VAL E 222
GLY E  76
ILE E 300
None
0.72A 4njvC-1cziE:
6.6
4njvC-1cziE:
17.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1g0v PROTEASE A INHIBITOR
3
PROTEINASE A


(Saccharomyces
cerevisiae)
PF00026
(Asp)
PF10466
(Inhibitor_I34)
5 ASP A  32
GLY A  34
ILE A  73
GLY B  21
ILE A 120
None
0.96A 4njvC-1g0vA:
7.3
4njvC-1g0vA:
16.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1hp1 5'-NUCLEOTIDASE

(Escherichia
coli)
PF00149
(Metallophos)
PF02872
(5_nucleotid_C)
5 ASP A 486
VAL A 443
ILE A 480
THR A 448
ILE A 444
None
0.98A 4njvC-1hp1A:
undetectable
4njvC-1hp1A:
12.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1hvc HIV-1 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
10 ARG A   8
ASP A  25
GLY A  27
ASP A  29
VAL A  32
ILE A  47
GLY A  49
ILE A  50
PRO A  81
ILE A  84
A79  A 800 (-3.4A)
A79  A 800 (-2.7A)
A79  A 800 (-3.0A)
A79  A 800 (-2.8A)
A79  A 800 ( 4.4A)
A79  A 800 ( 3.2A)
A79  A 800 ( 3.7A)
A79  A 800 (-3.8A)
A79  A 800 ( 3.9A)
A79  A 800 (-3.6A)
0.49A 4njvC-1hvcA:
17.9
4njvC-1hvcA:
43.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1hvc HIV-1 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
10 ARG A   8
ASP A  25
GLY A  27
ASP A  29
VAL A  32
ILE A  47
GLY A  49
ILE A  50
PRO A  81
ILE A  84
A79  A 800 (-3.6A)
A79  A 800 (-2.8A)
A79  A 800 (-3.0A)
A79  A 800 (-2.7A)
A79  A 800 ( 4.3A)
A79  A 800 ( 3.4A)
A79  A 800 (-3.4A)
A79  A 800 ( 4.0A)
A79  A 800 ( 3.4A)
A79  A 800 (-3.8A)
0.30A 4njvC-1hvcA:
17.9
4njvC-1hvcA:
43.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ir0 FERREDOXIN

(Bacillus
thermoproteolyticus)
PF13370
(Fer4_13)
5 GLY A  60
VAL A   6
GLY A  18
THR A   4
ILE A  66
None
SF4  A  82 ( 4.6A)
None
None
SF4  A  82 (-4.8A)
0.95A 4njvC-1ir0A:
undetectable
4njvC-1ir0A:
23.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1mld MALATE DEHYDROGENASE

(Sus scrofa)
PF00056
(Ldh_1_N)
PF02866
(Ldh_1_C)
5 GLY A   7
VAL A  97
ILE A 115
THR A  92
ILE A  96
None
0.96A 4njvC-1mldA:
undetectable
4njvC-1mldA:
15.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1nvm ACETALDEHYDE
DEHYDROGENASE
(ACYLATING)


(Pseudomonas sp.
CF600)
PF01118
(Semialdhyde_dh)
PF09290
(AcetDehyd-dimer)
5 GLY B 192
VAL B 211
GLY B 187
ILE B 186
ILE B 155
None
1.00A 4njvC-1nvmB:
undetectable
4njvC-1nvmB:
16.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1oxx ABC TRANSPORTER, ATP
BINDING PROTEIN


(Sulfolobus
solfataricus)
PF00005
(ABC_tran)
5 GLY K 249
VAL K 265
ILE K 347
GLY K 275
ILE K 235
None
None
None
None
IOD  K1921 (-4.4A)
0.95A 4njvC-1oxxK:
undetectable
4njvC-1oxxK:
16.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pix GLUTACONYL-COA
DECARBOXYLASE A
SUBUNIT


(Acidaminococcus
fermentans)
PF01039
(Carboxyl_trans)
6 GLY A 277
VAL A 143
GLY A 283
PRO A 182
THR A 203
ILE A 184
None
1.48A 4njvC-1pixA:
undetectable
4njvC-1pixA:
11.25
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1q9p HIV-1 PROTEASE

(Homo sapiens)
PF00077
(RVP)
6 ASP A  25
GLY A  27
ASP A  29
VAL A  32
PRO A  81
ILE A  84
None
0.86A 4njvC-1q9pA:
10.4
4njvC-1q9pA:
84.21
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1siv SIV PROTEASE

(Simian
immunodeficiency
virus)
PF00077
(RVP)
7 ARG A   8
ASP A  25
GLY A  27
GLY A  49
ILE A  50
PRO A  81
ILE A  84
None
0.66A 4njvC-1sivA:
18.4
4njvC-1sivA:
48.48
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1siv SIV PROTEASE

(Simian
immunodeficiency
virus)
PF00077
(RVP)
7 ASP A  25
GLY A  27
ASP A  29
GLY A  49
ILE A  50
PRO A  81
ILE A  84
None
0.44A 4njvC-1sivA:
18.4
4njvC-1sivA:
48.48
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1siv SIV PROTEASE

(Simian
immunodeficiency
virus)
PF00077
(RVP)
5 ASP A  25
GLY A  27
GLY A  48
PRO A  81
ILE A  84
None
0.97A 4njvC-1sivA:
18.4
4njvC-1sivA:
48.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1v9n MALATE DEHYDROGENASE

(Pyrococcus
horikoshii)
PF02615
(Ldh_2)
5 GLY A 101
VAL A  40
GLY A  95
PRO A  33
ILE A  39
None
1.00A 4njvC-1v9nA:
undetectable
4njvC-1v9nA:
13.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1vq0 33 KDA CHAPERONIN

(Thermotoga
maritima)
PF01430
(HSP33)
5 GLY A 111
VAL A  73
ILE A  70
GLY A 106
ILE A  64
None
0.89A 4njvC-1vq0A:
undetectable
4njvC-1vq0A:
16.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1z9f SINGLE-STRAND
BINDING PROTEIN


(Thermotoga
maritima)
PF00436
(SSB)
5 GLY A  11
VAL A  99
ILE A   7
THR A  57
ILE A  55
None
0.97A 4njvC-1z9fA:
undetectable
4njvC-1z9fA:
19.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2b4q RHAMNOLIPIDS
BIOSYNTHESIS
3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
REDUCTASE


(Pseudomonas
aeruginosa)
PF13561
(adh_short_C2)
5 GLY A 237
VAL A  90
ILE A  25
GLY A  28
ILE A  88
None
0.99A 4njvC-2b4qA:
undetectable
4njvC-2b4qA:
17.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bgs ALDOSE REDUCTASE

(Hordeum vulgare)
PF00248
(Aldo_ket_red)
6 ARG A 252
ASP A  14
VAL A 272
ILE A 270
GLY A  28
ILE A 257
None
None
None
None
None
NDP  A1321 (-4.4A)
1.33A 4njvC-2bgsA:
undetectable
4njvC-2bgsA:
15.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2e0w GAMMA-GLUTAMYLTRANSP
EPTIDASE


(Escherichia
coli)
PF01019
(G_glu_transpept)
5 ASP A 398
GLY A 401
VAL A  73
ILE A 101
THR A 163
None
0.97A 4njvC-2e0wA:
undetectable
4njvC-2e0wA:
11.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2e0x GAMMA-GLUTAMYLTRANSP
EPTIDASE


(Escherichia
coli)
PF01019
(G_glu_transpept)
5 ASP B 398
GLY B 401
VAL A  73
ILE A 101
THR A 163
None
0.95A 4njvC-2e0xB:
undetectable
4njvC-2e0xB:
19.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2fj0 CARBOXYLIC ESTER
HYDROLASE


(Manduca sexta)
PF00135
(COesterase)
5 GLY A 224
GLY A 352
ILE A 351
PRO A 517
ILE A 508
None
0.96A 4njvC-2fj0A:
undetectable
4njvC-2fj0A:
10.66
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2fmb EQUINE INFECTIOUS
ANEMIA VIRUS
PROTEASE


(Equine
infectious
anemia virus)
PF00077
(RVP)
9 ARG A   8
ASP A  25
GLY A  27
ASP A  29
VAL A  32
ILE A  53
GLY A  55
PRO A  86
ILE A  89
LP1  A 201 (-3.5A)
LP1  A 201 (-2.3A)
LP1  A 201 (-3.8A)
LP1  A 201 (-3.6A)
None
LP1  A 201 (-4.6A)
LP1  A 201 (-3.4A)
LP1  A 201 (-3.9A)
LP1  A 201 (-4.2A)
0.54A 4njvC-2fmbA:
15.0
4njvC-2fmbA:
33.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2fmb EQUINE INFECTIOUS
ANEMIA VIRUS
PROTEASE


(Equine
infectious
anemia virus)
PF00077
(RVP)
5 ASP A  25
GLY A  27
VAL A  32
GLY A  54
ILE A  89
LP1  A 201 (-2.3A)
LP1  A 201 (-3.8A)
None
LP1  A 201 (-3.6A)
LP1  A 201 (-4.2A)
0.76A 4njvC-2fmbA:
15.0
4njvC-2fmbA:
33.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2g3n ALPHA-GLUCOSIDASE

(Sulfolobus
solfataricus)
PF01055
(Glyco_hydro_31)
PF13802
(Gal_mutarotas_2)
6 ARG A 154
GLY A 115
ILE A 102
GLY A  66
ILE A  65
PRO A 528
None
1.38A 4njvC-2g3nA:
undetectable
4njvC-2g3nA:
10.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2q1y CELL DIVISION
PROTEIN FTSZ


(Mycobacterium
tuberculosis)
PF00091
(Tubulin)
PF12327
(FtsZ_C)
5 GLY A 224
VAL A 128
GLY A 193
THR A 157
ILE A 159
None
0.77A 4njvC-2q1yA:
undetectable
4njvC-2q1yA:
14.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2q50 GLYOXYLATE
REDUCTASE/HYDROXYPYR
UVATE REDUCTASE


(Homo sapiens)
PF00389
(2-Hacid_dh)
PF02826
(2-Hacid_dh_C)
5 GLY A  72
VAL A  63
ILE A  78
GLY A  54
ILE A  67
None
0.92A 4njvC-2q50A:
undetectable
4njvC-2q50A:
16.77
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2rkf PROTEASE RETROPEPSIN

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
8 ARG A   8
ASP A  25
GLY A  27
ASP A  29
GLY A  49
ILE A  50
PRO A  81
ILE A  84
AB1  A 501 ( 4.7A)
AB1  A 501 (-2.4A)
AB1  A 501 (-3.9A)
AB1  A 501 ( 3.3A)
AB1  A 501 (-3.5A)
AB1  A 501 (-3.8A)
AB1  A 501 (-4.2A)
AB1  A 501 ( 4.2A)
0.45A 4njvC-2rkfA:
20.6
4njvC-2rkfA:
80.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2vca ALPHA-N-ACETYLGLUCOS
AMINIDASE


(Clostridium
perfringens)
PF00754
(F5_F8_type_C)
PF05089
(NAGLU)
PF12971
(NAGLU_N)
PF12972
(NAGLU_C)
5 GLY A  32
VAL A 152
ILE A 132
GLY A 130
ILE A  29
None
0.82A 4njvC-2vcaA:
undetectable
4njvC-2vcaA:
7.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2vca ALPHA-N-ACETYLGLUCOS
AMINIDASE


(Clostridium
perfringens)
PF00754
(F5_F8_type_C)
PF05089
(NAGLU)
PF12971
(NAGLU_N)
PF12972
(NAGLU_C)
5 VAL A 152
ILE A 132
GLY A 130
ILE A  74
ILE A  29
None
0.91A 4njvC-2vcaA:
undetectable
4njvC-2vcaA:
7.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2vxy CELL DIVISION
PROTEIN FTSZ


(Bacillus
subtilis)
PF00091
(Tubulin)
PF12327
(FtsZ_C)
5 GLY A 227
VAL A 131
GLY A 196
THR A 160
ILE A 162
None
0.87A 4njvC-2vxyA:
undetectable
4njvC-2vxyA:
14.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3er6 PUTATIVE
TRANSCRIPTIONAL
REGULATOR PROTEIN


(Vibrio
parahaemolyticus)
PF01965
(DJ-1_PfpI)
5 GLY A 168
ILE A  83
GLY A  81
ILE A  79
ILE A 118
None
1.01A 4njvC-3er6A:
undetectable
4njvC-3er6A:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hn6 GLUCOSAMINE-6-PHOSPH
ATE DEAMINASE


(Borreliella
burgdorferi)
PF01182
(Glucosamine_iso)
5 GLY A 139
ILE A 193
GLY A 136
ILE A 202
ILE A 226
None
0.93A 4njvC-3hn6A:
undetectable
4njvC-3hn6A:
17.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kf3 INVERTASE

(Schwanniomyces
occidentalis)
PF00251
(Glyco_hydro_32N)
PF08244
(Glyco_hydro_32C)
5 ASP A 287
GLY A 289
ASP A 291
ILE A 485
PRO A 355
None
None
None
None
NAG  A5001 ( 4.9A)
0.95A 4njvC-3kf3A:
undetectable
4njvC-3kf3A:
11.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kh9 THIOL:DISULFIDE
INTERCHANGE PROTEIN
DSBE


(Pseudomonas
aeruginosa)
PF08534
(Redoxin)
5 ASP A 123
GLY A 126
VAL A  69
GLY A 133
ILE A  97
None
0.93A 4njvC-3kh9A:
undetectable
4njvC-3kh9A:
17.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lun ULILYSIN

(Methanosarcina
acetivorans)
PF05572
(Peptidase_M43)
6 ASP A 207
VAL A  71
ILE A  87
GLY A 211
ILE A  93
ILE A 173
None
1.48A 4njvC-3lunA:
undetectable
4njvC-3lunA:
18.41
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3mws HIV-1 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
9 ASP A  25
GLY A  27
ASP A  29
VAL A  32
ILE A  47
GLY A  49
ILE A  50
PRO A  81
ILE A  84
None
0.46A 4njvC-3mwsA:
19.8
4njvC-3mwsA:
70.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3n71 HISTONE LYSINE
METHYLTRANSFERASE
SMYD1


(Mus musculus)
PF00856
(SET)
PF01753
(zf-MYND)
5 ARG A  37
GLY A 196
VAL A 214
GLY A 202
ILE A 234
None
None
None
SFG  A 491 (-4.1A)
None
0.96A 4njvC-3n71A:
undetectable
4njvC-3n71A:
14.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3njx RHAMNOGALACTURONASE
B


(Aspergillus
aculeatus)
PF09284
(RhgB_N)
PF14683
(CBM-like)
PF14686
(fn3_3)
5 GLY A 346
ASP A 349
VAL A 336
GLY A 420
ILE A 419
None
CA  A 800 (-2.9A)
None
None
None
0.93A 4njvC-3njxA:
undetectable
4njvC-3njxA:
13.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3o04 BETA-KETO-ACYL
CARRIER PROTEIN
SYNTHASE II


(Listeria
monocytogenes)
PF00109
(ketoacyl-synt)
PF02801
(Ketoacyl-synt_C)
5 GLY A 102
VAL A 238
ILE A 171
THR A   9
ILE A 239
None
0.91A 4njvC-3o04A:
undetectable
4njvC-3o04A:
13.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3p0s CAPSID PROTEIN VP

(Lepidopteran
iteradensovirus
1)
PF01057
(Parvo_NS1)
5 VAL A 135
ILE A 367
GLY A 101
THR A 390
ILE A 388
None
0.91A 4njvC-3p0sA:
undetectable
4njvC-3p0sA:
11.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3r18 SULFITE OXIDASE

(Gallus gallus)
PF00174
(Oxidored_molyb)
PF03404
(Mo-co_dimer)
5 ARG A 189
ASP A 321
VAL A 295
GLY A 324
PRO A 346
None
0.89A 4njvC-3r18A:
undetectable
4njvC-3r18A:
10.37
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3t3c HIV-1 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
7 ASP A  25
GLY A  27
ASP A  29
VAL A  32
ILE A  47
GLY A  49
ILE A  50
017  A 201 (-2.6A)
017  A 201 (-3.4A)
017  A 201 (-3.5A)
None
None
017  A 201 (-4.0A)
017  A 201 (-3.3A)
0.54A 4njvC-3t3cA:
18.4
4njvC-3t3cA:
74.75
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3t3c HIV-1 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
6 GLY A  27
ASP A  29
VAL A  32
ILE A  47
GLY A  49
PRO A  81
017  A 201 (-3.4A)
017  A 201 (-3.5A)
None
None
017  A 201 (-4.0A)
None
0.89A 4njvC-3t3cA:
18.4
4njvC-3t3cA:
74.75
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ttp HIV-1 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
7 ARG A   8
ASP A  25
GLY A  27
ASP A  29
GLY A  49
PRO A  81
ILE A  84
017  A 201 ( 4.8A)
017  A 201 (-2.6A)
017  A 201 (-3.6A)
017  A 201 (-3.3A)
017  A 201 (-3.0A)
017  A 201 (-4.1A)
017  A 201 (-4.7A)
0.60A 4njvC-3ttpA:
19.7
4njvC-3ttpA:
77.78
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ttp HIV-1 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
7 ASP A  25
GLY A  27
ASP A  29
GLY A  49
ILE A  50
PRO A  81
ILE A  84
017  A 201 (-2.6A)
017  A 201 (-3.6A)
017  A 201 (-3.3A)
017  A 201 (-3.0A)
017  A 201 (-3.3A)
017  A 201 (-4.1A)
017  A 201 (-4.7A)
0.49A 4njvC-3ttpA:
19.7
4njvC-3ttpA:
77.78
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3u7s POL POLYPROTEIN

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
8 ARG A   8
ASP A  25
GLY A  27
ASP A  29
ILE A  47
GLY A  49
ILE A  50
PRO A  81
None
017  A 202 ( 2.5A)
017  A 201 ( 3.5A)
017  A 201 (-3.2A)
017  A 202 (-3.6A)
017  A 202 (-2.9A)
017  A 201 ( 3.5A)
017  A 202 (-4.0A)
0.69A 4njvC-3u7sA:
20.2
4njvC-3u7sA:
78.79
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3uhl PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
5 ARG A   8
ASP A  25
GLY A  27
ASP A  29
PRO A  81
None
0.78A 4njvC-3uhlA:
16.0
4njvC-3uhlA:
79.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wbn PUTATIVE
UNCHARACTERIZED
PROTEIN


(Pyrococcus
furiosus)
PF01554
(MatE)
5 GLY A 146
VAL A  62
ILE A 119
ILE A 113
ILE A  66
None
None
None
OLC  A 503 ( 4.5A)
None
0.96A 4njvC-3wbnA:
undetectable
4njvC-3wbnA:
12.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wgk CELL DIVISION
PROTEIN FTSZ


(Staphylococcus
aureus)
PF00091
(Tubulin)
PF12327
(FtsZ_C)
5 GLY A 225
VAL A 131
GLY A 196
THR A 160
ILE A 162
None
0.90A 4njvC-3wgkA:
undetectable
4njvC-3wgkA:
11.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ch1 PROTEIN SUP-12,
ISOFORM B


(Caenorhabditis
elegans)
PF00076
(RRM_1)
5 GLY A  41
ILE A  37
ILE A  67
THR A  50
ILE A 100
None
0.98A 4njvC-4ch1A:
undetectable
4njvC-4ch1A:
23.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ddw REVERSE GYRASE

(Thermotoga
maritima)
PF00270
(DEAD)
PF01131
(Topoisom_bac)
PF01751
(Toprim)
5 ARG A 725
VAL A1026
ILE A1007
THR A1021
ILE A1025
None
0.98A 4njvC-4ddwA:
undetectable
4njvC-4ddwA:
7.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4din CAMP-DEPENDENT
PROTEIN KINASE TYPE
I-BETA REGULATORY
SUBUNIT


(Homo sapiens)
PF00027
(cNMP_binding)
PF02197
(RIIa)
5 GLY B 199
VAL B 162
GLY B 223
ILE B 224
ILE B 163
None
1.00A 4njvC-4dinB:
undetectable
4njvC-4dinB:
12.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4e6e CELL DIVISION
PROTEIN FTSZ


(Thermobifida
fusca)
PF00091
(Tubulin)
PF12327
(FtsZ_C)
5 GLY A 224
VAL A 128
GLY A 193
THR A 157
ILE A 159
None
0.83A 4njvC-4e6eA:
undetectable
4njvC-4e6eA:
17.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4eqv INVERTASE 2

(Saccharomyces
cerevisiae)
PF00251
(Glyco_hydro_32N)
PF08244
(Glyco_hydro_32C)
5 ASP A 261
GLY A 263
ASP A 265
ILE A 464
PRO A 333
None
1.01A 4njvC-4eqvA:
undetectable
4njvC-4eqvA:
11.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gis ENOLASE

(Vibrio harveyi)
PF02746
(MR_MLE_N)
PF13378
(MR_MLE_C)
5 ARG A 371
GLY A 366
ILE A 100
THR A  23
ILE A 315
None
0.97A 4njvC-4gisA:
undetectable
4njvC-4gisA:
13.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4hh2 TRANSCRIPTIONAL
REGULATOR, PPSR


(Rhodobacter
sphaeroides)
PF13188
(PAS_8)
PF13426
(PAS_9)
5 GLY A 321
ASP A 316
ILE A 290
GLY A 288
ILE A 329
None
0.92A 4njvC-4hh2A:
undetectable
4njvC-4hh2A:
13.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4iv5 ASPARTATE
CARBAMOYLTRANSFERASE
, PUTATIVE


(Trypanosoma
cruzi)
PF00185
(OTCace)
PF02729
(OTCace_N)
5 GLY A  51
VAL A 109
ILE A  74
PRO A  56
THR A  55
None
0.93A 4njvC-4iv5A:
undetectable
4njvC-4iv5A:
14.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kpn NUCLEOSIDE
N-RIBOHYDROLASE 1


(Physcomitrella
patens)
PF01156
(IU_nuc_hydro)
5 GLY A  27
ASP A  29
GLY A 142
ILE A  51
ILE A  34
None
CA  A 400 ( 4.5A)
CA  A 400 ( 4.4A)
None
None
0.99A 4njvC-4kpnA:
undetectable
4njvC-4kpnA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kpo NUCLEOSIDE
N-RIBOHYDROLASE 3


(Zea mays)
PF01156
(IU_nuc_hydro)
5 GLY A  10
ASP A  12
GLY A 124
ILE A  34
ILE A  17
None
CA  A 401 ( 4.8A)
CA  A 401 ( 4.3A)
None
None
0.91A 4njvC-4kpoA:
undetectable
4njvC-4kpoA:
21.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4l0c DEFORMYLASE

(Pseudomonas
putida)
PF12697
(Abhydrolase_6)
5 GLY A  58
ASP A  55
ILE A  28
GLY A  30
ILE A  31
None
None
None
ACY  A 301 (-3.6A)
None
0.99A 4njvC-4l0cA:
undetectable
4njvC-4l0cA:
18.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lur INTERPHOTORECEPTOR
RETINOID-BINDING
PROTEIN(IRBP)


(Danio rerio)
PF03572
(Peptidase_S41)
PF11918
(Peptidase_S41_N)
5 ILE A 115
GLY A 155
ILE A 156
THR A 148
ILE A 111
None
0.94A 4njvC-4lurA:
undetectable
4njvC-4lurA:
15.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4m75 U6 SNRNA-ASSOCIATED
SM-LIKE PROTEIN LSM5


(Saccharomyces
cerevisiae)
PF01423
(LSM)
5 GLY E  32
ILE E  12
GLY E  36
ILE E  44
ILE E  22
None
0.92A 4njvC-4m75E:
undetectable
4njvC-4m75E:
22.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4mdy PERIPLASMIC BINDING
PROTEIN


(Mycolicibacterium
smegmatis)
PF01497
(Peripla_BP_2)
5 VAL A  37
GLY A 164
ILE A 163
THR A  46
ILE A  48
None
0.87A 4njvC-4mdyA:
undetectable
4njvC-4mdyA:
17.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qi6 CELLOBIOSE
DEHYDROGENASE


(Crassicarpon
hotsonii)
PF00732
(GMC_oxred_N)
PF00734
(CBM_1)
PF05199
(GMC_oxred_C)
PF16010
(CDH-cyt)
5 GLY A 481
VAL A 440
ILE A 258
ILE A 477
ILE A 488
FAD  A 902 (-3.6A)
FAD  A 902 (-4.2A)
None
None
None
0.98A 4njvC-4qi6A:
undetectable
4njvC-4qi6A:
8.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qo5 HYPOTHETICAL
MULTIHEME PROTEIN


(Ignicoccus
hospitalis)
PF13435
(Cytochrome_C554)
PF13447
(Multi-haem_cyto)
5 GLY A 225
GLY A 230
PRO A 135
THR A 134
ILE A 132
None
HEC  A 606 ( 3.9A)
HEC  A 605 ( 4.8A)
None
HEC  A 602 ( 4.6A)
0.94A 4njvC-4qo5A:
undetectable
4njvC-4qo5A:
12.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rg8 EXONUCLEASE I

(Methylocaldum
szegediense)
PF00929
(RNase_T)
PF08411
(Exonuc_X-T_C)
6 GLY A  97
ASP A 104
ILE A  84
GLY A  29
ILE A  30
THR A  93
None
MG  A 501 ( 4.1A)
None
None
None
None
1.14A 4njvC-4rg8A:
undetectable
4njvC-4rg8A:
12.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4tqk LECTIN 2

(Agrocybe
aegerita)
PF13517
(VCBS)
5 ASP A 345
GLY A 350
ASP A 290
VAL A 343
GLY A 371
None
0.91A 4njvC-4tqkA:
undetectable
4njvC-4tqkA:
13.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4u39 CELL DIVISION
PROTEIN FTSZ


(Bacillus
subtilis)
PF00091
(Tubulin)
PF12327
(FtsZ_C)
5 GLY A 227
VAL A 131
GLY A 196
THR A 160
ILE A 162
None
0.93A 4njvC-4u39A:
undetectable
4njvC-4u39A:
15.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4xgj UNCHARACTERIZED
PROTEIN


(Pectobacterium
atrosepticum)
PF07005
(DUF1537)
PF17042
(DUF1357_C)
5 ARG A 216
GLY A 229
VAL A  13
GLY A  27
ILE A  88
None
0.95A 4njvC-4xgjA:
undetectable
4njvC-4xgjA:
11.98
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4ydf HTLV-1 PROTEASE

(Primate
T-lymphotropic
virus 1)
PF00077
(RVP)
7 ARG A  10
ASP A  32
GLY A  34
ASP A  36
VAL A  39
GLY A  58
ILE A 100
None
4B1  A 201 (-2.9A)
4B1  A 201 ( 4.6A)
4B1  A 201 (-4.4A)
None
4B1  A 201 (-3.4A)
4B1  A 201 (-4.8A)
0.63A 4njvC-4ydfA:
13.2
4njvC-4ydfA:
33.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4yjy CHALCONE SYNTHASE 1

(Oryza sativa)
PF00195
(Chal_sti_synt_N)
PF02797
(Chal_sti_synt_C)
6 GLY A 375
VAL A 274
ILE A 257
GLY A 379
ILE A 249
ILE A 278
None
1.33A 4njvC-4yjyA:
undetectable
4njvC-4yjyA:
11.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ywl CELL DIVISION
CONTROL PROTEIN 21


(Pyrococcus
furiosus)
PF14551
(MCM_N)
PF17207
(MCM_OB)
5 GLY A 225
VAL A 221
ILE A 187
GLY A 205
ILE A 206
None
0.87A 4njvC-4ywlA:
undetectable
4njvC-4ywlA:
20.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ywl CELL DIVISION
CONTROL PROTEIN 21


(Pyrococcus
furiosus)
PF14551
(MCM_N)
PF17207
(MCM_OB)
5 VAL A 221
ILE A 187
GLY A 205
ILE A 206
ILE A 249
None
0.94A 4njvC-4ywlA:
undetectable
4njvC-4ywlA:
20.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4yzg PROTEIN PHOSPHATASE
2C 57


(Arabidopsis
thaliana)
PF00481
(PP2C)
5 ASP A 238
GLY A 160
GLY A 179
ILE A 178
ILE A 230
None
0.99A 4njvC-4yzgA:
undetectable
4njvC-4yzgA:
16.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4z38 MLNA

(Bacillus
velezensis)
no annotation 5 GLY A 576
GLY A 748
ILE A 747
PRO A 559
ILE A 556
FMN  A 900 (-3.5A)
None
None
None
None
0.99A 4njvC-4z38A:
undetectable
4njvC-4z38A:
13.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4z42 UREASE SUBUNIT ALPHA

(Yersinia
enterocolitica)
PF00449
(Urease_alpha)
PF01979
(Amidohydro_1)
5 GLY C 172
ASP C 365
ILE C 140
GLY C 162
ILE C 143
None
NI  C 602 ( 1.9A)
None
None
None
1.00A 4njvC-4z42C:
undetectable
4njvC-4z42C:
9.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5a8d CARBOHYDRATE BINDING
FAMILY 6


(Ruminiclostridium
thermocellum)
PF04616
(Glyco_hydro_43)
5 GLY A 168
VAL A 149
ILE A 192
ILE A 189
ILE A 128
GOL  A1340 (-3.3A)
None
None
None
None
0.95A 4njvC-5a8dA:
undetectable
4njvC-5a8dA:
14.06
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5b18 PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
5 ARG A   8
GLY A  27
ASP A  29
GLY A  49
ILE A  84
None
0.92A 4njvC-5b18A:
18.2
4njvC-5b18A:
78.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5d1i CYCLIC
NUCLEOTIDE-BINDING
PROTEIN


(Brucella
abortus)
PF00027
(cNMP_binding)
5 ARG A  40
GLY A  96
VAL A  76
GLY A  83
ILE A  60
None
0.99A 4njvC-5d1iA:
undetectable
4njvC-5d1iA:
22.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5j72 PUTATIVE
N-ACETYLMURAMOYL-L-A
LANINE
AMIDASE,AUTOLYSIN
CWP6


(Clostridioides
difficile)
PF01520
(Amidase_3)
PF04122
(CW_binding_2)
5 ARG A 149
GLY A 390
VAL A 169
ILE A 180
ILE A 193
None
1.01A 4njvC-5j72A:
undetectable
4njvC-5j72A:
10.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5m2s PUTATIVE
CELLULOSOMAL
SCAFFOLDIN PROTEIN


(Ruminococcus
flavefaciens)
no annotation 5 ASP A  47
VAL A  99
ILE A 138
GLY A 136
ILE A  52
GOL  A 203 (-3.7A)
None
None
None
None
1.01A 4njvC-5m2sA:
undetectable
4njvC-5m2sA:
16.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mif 'CARBOXYL ESTERASE 2

(Tuber
melanosporum)
PF07859
(Abhydrolase_3)
5 GLY A 188
VAL A 143
ILE A 132
ILE A 335
ILE A 112
None
0.99A 4njvC-5mifA:
undetectable
4njvC-5mifA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ol2 ELECTRON TRANSFER
FLAVOPROTEIN SMALL
SUBUNIT


(Clostridioides
difficile)
no annotation 6 GLY B  46
VAL B 160
ILE B 145
ILE B 118
THR B 153
ILE B 151
None
1.10A 4njvC-5ol2B:
undetectable
4njvC-5ol2B:
20.43
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5t2z PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
6 ARG A   8
ASP A  25
ASP A  30
GLY A  49
ILE A  50
ILE A  84
None
1.43A 4njvC-5t2zA:
19.8
4njvC-5t2zA:
85.86
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5t2z PROTEASE

(Human
immunodeficiency
virus 1)
PF00077
(RVP)
10 ARG A   8
ASP A  25
GLY A  27
ASP A  29
VAL A  32
ILE A  47
GLY A  49
ILE A  50
PRO A  81
ILE A  84
None
0.47A 4njvC-5t2zA:
19.8
4njvC-5t2zA:
85.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5t89 VASCULAR ENDOTHELIAL
GROWTH FACTOR
RECEPTOR 1


(Homo sapiens)
PF00047
(ig)
PF07679
(I-set)
PF13927
(Ig_3)
5 ARG X 261
GLY X 316
PRO X 257
THR X 256
ILE X 229
None
0.96A 4njvC-5t89X:
undetectable
4njvC-5t89X:
10.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vj7 OXIDOREDUCTASE

(Pyrococcus
furiosus)
PF07992
(Pyr_redox_2)
PF14691
(Fer4_20)
5 GLY A 264
ILE A 357
GLY A 259
ILE A 260
PRO A 353
None
0.98A 4njvC-5vj7A:
undetectable
4njvC-5vj7A:
12.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6aph ADENOSYLHOMOCYSTEINA
SE


(Elizabethkingia
anophelis)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
5 GLY A 225
VAL A 287
ILE A 277
ILE A 304
ILE A 286
NAD  A 500 (-3.6A)
None
None
NAD  A 500 (-4.4A)
NAD  A 500 (-4.8A)
0.97A 4njvC-6aphA:
undetectable
4njvC-6aphA:
14.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6b9h PROTEIN HOOK HOMOLOG
3


(Homo sapiens)
no annotation 5 GLY A 124
VAL A  44
ILE A  20
ILE A 139
ILE A  48
None
0.79A 4njvC-6b9hA:
undetectable
4njvC-6b9hA:
23.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6cqb CHALCONE SYNTHASE

(Piper
methysticum)
no annotation 6 GLY A 373
VAL A 272
ILE A 255
GLY A 377
ILE A 247
ILE A 276
None
1.33A 4njvC-6cqbA:
undetectable
4njvC-6cqbA:
18.27
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6fiv RETROPEPSIN

(Feline
immunodeficiency
virus)
PF00077
(RVP)
5 ARG A  13
ASP A  30
GLY A  32
ASP A  34
GLY A  58
None
3TL  A 201 (-3.5A)
3TL  A 201 (-3.4A)
3TL  A 201 (-3.9A)
3TL  A 201 (-3.4A)
0.27A 4njvC-6fivA:
15.5
4njvC-6fivA:
31.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6upj HIV-2 PROTEASE

(Human
immunodeficiency
virus 2)
PF00077
(RVP)
6 ARG A   8
ASP A  25
ASP A  30
GLY A  49
ILE A  50
PRO A  81
None
NIU  A 100 (-2.8A)
None
NIU  A 100 ( 3.8A)
NIU  A 100 (-3.9A)
None
1.39A 4njvC-6upjA:
18.5
4njvC-6upjA:
47.47
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6upj HIV-2 PROTEASE

(Human
immunodeficiency
virus 2)
PF00077
(RVP)
7 ARG A   8
ASP A  25
GLY A  27
ASP A  29
GLY A  49
ILE A  50
PRO A  81
None
NIU  A 100 (-2.8A)
NIU  A 100 (-4.5A)
None
NIU  A 100 ( 3.8A)
NIU  A 100 (-3.9A)
None
0.93A 4njvC-6upjA:
18.5
4njvC-6upjA:
47.47
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6upj HIV-2 PROTEASE

(Human
immunodeficiency
virus 2)
PF00077
(RVP)
6 ASP A  25
ASP A  30
GLY A  49
ILE A  50
PRO A  81
ILE A  84
NIU  A 100 (-2.8A)
None
NIU  A 100 ( 3.8A)
NIU  A 100 (-3.9A)
None
None
1.32A 4njvC-6upjA:
18.5
4njvC-6upjA:
47.47
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6upj HIV-2 PROTEASE

(Human
immunodeficiency
virus 2)
PF00077
(RVP)
7 ASP A  25
GLY A  27
ASP A  29
GLY A  49
ILE A  50
PRO A  81
ILE A  84
NIU  A 100 (-2.8A)
NIU  A 100 (-4.5A)
None
NIU  A 100 ( 3.8A)
NIU  A 100 (-3.9A)
None
None
0.76A 4njvC-6upjA:
18.5
4njvC-6upjA:
47.47