SIMILAR PATTERNS OF AMINO ACIDS FOR 4NG6_A_RISA405_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1fps FARNESYL DIPHOSPHATE
SYNTHASE

(Gallus gallus) 		PF00348
(polyprenyl_synt) 		5 LEU A 114
ARG A 126
THR A 215
TYR A 218
GLN A 254
 None
 0.88A 4ng6A-1fpsA:
44.6		 4ng6A-1fpsA:
64.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1fps FARNESYL DIPHOSPHATE
SYNTHASE

(Gallus gallus) 		PF00348
(polyprenyl_synt) 		7 LEU A 114
ASP A 117
ARG A 126
THR A 181
GLN A 185
THR A 215
TYR A 218
 None
 0.77A 4ng6A-1fpsA:
44.6		 4ng6A-1fpsA:
64.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1fps FARNESYL DIPHOSPHATE
SYNTHASE

(Gallus gallus) 		PF00348
(polyprenyl_synt) 		5 LEU A 114
ASP A 117
ASP A 121
ARG A 126
THR A 215
 None
 1.36A 4ng6A-1fpsA:
44.6		 4ng6A-1fpsA:
64.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rqj GERANYLTRANSTRANSFER
ASE

(Escherichia
coli) 		PF00348
(polyprenyl_synt) 		5 ASP A 105
ASP A 111
THR A 203
GLN A 179
ASP A 248
 MG  A 907 (-2.5A)
MG  A 909 (-2.4A)
IPE  A 900 ( 3.3A)
RIS  A 901 (-3.2A)
MG  A 908 ( 4.7A)
 1.22A 4ng6A-1rqjA:
30.6		 4ng6A-1rqjA:
25.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rqj GERANYLTRANSTRANSFER
ASE

(Escherichia
coli) 		PF00348
(polyprenyl_synt) 		9 LEU A 102
ASP A 105
ASP A 111
ARG A 116
GLN A 179
THR A 203
GLN A 241
ASP A 244
LYS A 258
 None
MG  A 907 (-2.5A)
MG  A 909 (-2.4A)
RIS  A 901 (-2.7A)
RIS  A 901 (-3.2A)
IPE  A 900 ( 3.3A)
RIS  A 901 ( 3.6A)
MG  A 908 ( 2.7A)
RIS  A 901 (-2.7A)
 0.60A 4ng6A-1rqjA:
30.6		 4ng6A-1rqjA:
25.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rtr GERANYLTRANSTRANSFER
ASE

(Staphylococcus
aureus) 		PF00348
(polyprenyl_synt) 		5 LEU A  79
ASP A  82
ARG A  93
GLN A 154
THR A 178
 None
 1.07A 4ng6A-1rtrA:
25.5		 4ng6A-1rtrA:
25.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rtr GERANYLTRANSTRANSFER
ASE

(Staphylococcus
aureus) 		PF00348
(polyprenyl_synt) 		6 LEU A  79
ASP A  88
ARG A  93
GLN A 154
THR A 178
GLN A 215
 None
 0.89A 4ng6A-1rtrA:
25.5		 4ng6A-1rtrA:
25.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wmw GERANYLGERANYL
DIPHOSPHATE
SYNTHETASE

(Thermus
thermophilus) 		PF00348
(polyprenyl_synt) 		6 LEU A  76
ARG A  88
THR A 142
TYR A 176
GLN A 209
ASP A 212
 None
 0.91A 4ng6A-1wmwA:
32.5		 4ng6A-1wmwA:
27.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wmw GERANYLGERANYL
DIPHOSPHATE
SYNTHETASE

(Thermus
thermophilus) 		PF00348
(polyprenyl_synt) 		7 LEU A  76
ASP A  79
ASP A  83
ARG A  88
GLN A 146
TYR A 176
GLN A 209
 None
 0.99A 4ng6A-1wmwA:
32.5		 4ng6A-1wmwA:
27.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wmw GERANYLGERANYL
DIPHOSPHATE
SYNTHETASE

(Thermus
thermophilus) 		PF00348
(polyprenyl_synt) 		7 LEU A  76
ASP A  83
ARG A  88
THR A 142
GLN A 146
TYR A 176
GLN A 209
 None
 0.60A 4ng6A-1wmwA:
32.5		 4ng6A-1wmwA:
27.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wy0 GERANYLGERANYL
PYROPHOSPHATE
SYNTHETASE

(Pyrococcus
horikoshii) 		PF00348
(polyprenyl_synt) 		6 LEU A  83
ASP A  90
ARG A  95
GLN A 153
THR A 178
GLN A 215
 None
 0.69A 4ng6A-1wy0A:
29.1		 4ng6A-1wy0A:
26.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1y8a HYPOTHETICAL PROTEIN
AF1437

(Archaeoglobus
fulgidus) 		no annotation 5 LEU A  58
ASP A  37
THR A 126
TYR A 106
ASP A  14
 None
 1.11A 4ng6A-1y8aA:
undetectable		 4ng6A-1y8aA:
27.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2azk GERANYLGERANYL
PYROPHOSPHATE
SYNTHETASE

(Sulfolobus
solfataricus) 		PF00348
(polyprenyl_synt) 		5 LEU A  78
ASP A  81
ARG A  90
THR A 161
GLN A 197
 None
 1.04A 4ng6A-2azkA:
22.8		 4ng6A-2azkA:
26.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2azk GERANYLGERANYL
PYROPHOSPHATE
SYNTHETASE

(Sulfolobus
solfataricus) 		PF00348
(polyprenyl_synt) 		5 LEU A  78
ASP A  81
THR A 139
THR A 161
GLN A 197
 None
 0.96A 4ng6A-2azkA:
22.8		 4ng6A-2azkA:
26.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2azk GERANYLGERANYL
PYROPHOSPHATE
SYNTHETASE

(Sulfolobus
solfataricus) 		PF00348
(polyprenyl_synt) 		5 LEU A  78
ASP A  85
ARG A  90
THR A 161
GLN A 197
 None
 0.82A 4ng6A-2azkA:
22.8		 4ng6A-2azkA:
26.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2b49 PROTEIN TYROSINE
PHOSPHATASE,
NON-RECEPTOR TYPE 3

(Homo sapiens) 		PF00102
(Y_phosphatase) 		5 ASP A 760
THR A 747
LEU A 746
THR A 745
GLN A 805
 None
 1.32A 4ng6A-2b49A:
undetectable		 4ng6A-2b49A:
20.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2dh4 YPL069C

(Saccharomyces
cerevisiae) 		PF00348
(polyprenyl_synt) 		8 LEU A  77
ASP A  80
ASP A  84
ARG A  89
GLN A 147
THR A 175
GLN A 211
ASP A 214
 None
MG  A 341 (-2.6A)
MG  A 341 (-3.0A)
MG  A 341 ( 4.6A)
None
None
None
None
 0.39A 4ng6A-2dh4A:
26.6		 4ng6A-2dh4A:
23.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2dh4 YPL069C

(Saccharomyces
cerevisiae) 		PF00348
(polyprenyl_synt) 		5 LEU A  77
ASP A  80
ASP A  84
ARG A  89
THR A 175
 None
MG  A 341 (-2.6A)
MG  A 341 (-3.0A)
MG  A 341 ( 4.6A)
None
 1.27A 4ng6A-2dh4A:
26.6		 4ng6A-2dh4A:
23.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ftz GERANYLTRANSTRANSFER
ASE

(Thermotoga
maritima) 		PF00348
(polyprenyl_synt) 		5 LEU A  71
ASP A  74
ARG A  85
THR A 164
GLN A 198
 None
UNL  A 273 (-3.0A)
UNL  A 274 (-4.1A)
MLY  A 163 ( 3.9A)
MLY  A 163 ( 3.8A)
 0.86A 4ng6A-2ftzA:
24.6		 4ng6A-2ftzA:
25.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ftz GERANYLTRANSTRANSFER
ASE

(Thermotoga
maritima) 		PF00348
(polyprenyl_synt) 		5 LEU A  71
ASP A  80
ARG A  85
THR A 164
GLN A 198
 None
MLY  A 223 ( 3.6A)
UNL  A 274 (-4.1A)
MLY  A 163 ( 3.9A)
MLY  A 163 ( 3.8A)
 0.47A 4ng6A-2ftzA:
24.6		 4ng6A-2ftzA:
25.98
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2o1o PUTATIVE FARNESYL
PYROPHOSPHATE
SYNTHASE

(Cryptosporidium
parvum) 		PF00348
(polyprenyl_synt) 		5 LEU A 112
ARG A 124
GLN A 251
THR A 215
TYR A 214
 None
RIS  A 400 (-2.9A)
RIS  A 400 (-3.1A)
None
None
 1.39A 4ng6A-2o1oA:
35.9		 4ng6A-2o1oA:
32.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2o1o PUTATIVE FARNESYL
PYROPHOSPHATE
SYNTHASE

(Cryptosporidium
parvum) 		PF00348
(polyprenyl_synt) 		7 LEU A 112
ASP A 115
ASP A 119
ARG A 124
THR A 180
GLN A 184
GLN A 251
 None
MG  A 503 (-2.5A)
MG  A 502 (-2.4A)
RIS  A 400 (-2.9A)
None
RIS  A 400 ( 3.5A)
RIS  A 400 (-3.1A)
 0.63A 4ng6A-2o1oA:
35.9		 4ng6A-2o1oA:
32.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2o1o PUTATIVE FARNESYL
PYROPHOSPHATE
SYNTHASE

(Cryptosporidium
parvum) 		PF00348
(polyprenyl_synt) 		8 LEU A 112
ASP A 115
ASP A 119
ARG A 124
THR A 180
THR A 211
TYR A 214
GLN A 251
 None
MG  A 503 (-2.5A)
MG  A 502 (-2.4A)
RIS  A 400 (-2.9A)
None
RIS  A 400 (-3.7A)
None
RIS  A 400 (-3.1A)
 0.40A 4ng6A-2o1oA:
35.9		 4ng6A-2o1oA:
32.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2o1o PUTATIVE FARNESYL
PYROPHOSPHATE
SYNTHASE

(Cryptosporidium
parvum) 		PF00348
(polyprenyl_synt) 		5 LEU A 112
ASP A 115
ASP A 119
THR A 211
GLN A 184
 None
MG  A 503 (-2.5A)
MG  A 502 (-2.4A)
RIS  A 400 (-3.7A)
RIS  A 400 ( 3.5A)
 1.38A 4ng6A-2o1oA:
35.9		 4ng6A-2o1oA:
32.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2q80 GERANYLGERANYL
PYROPHOSPHATE
SYNTHETASE

(Homo sapiens) 		PF00348
(polyprenyl_synt) 		7 LEU A  61
ASP A  64
ASP A  68
ARG A  73
GLN A 126
GLN A 185
ASP A 188
 None
GRG  A 500 (-2.4A)
MG  A 400 (-2.6A)
GRG  A 500 (-2.9A)
GRG  A 500 ( 3.5A)
GRG  A 500 (-3.2A)
GRG  A 500 (-3.5A)
 0.71A 4ng6A-2q80A:
11.5		 4ng6A-2q80A:
26.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2q80 GERANYLGERANYL
PYROPHOSPHATE
SYNTHETASE

(Homo sapiens) 		PF00348
(polyprenyl_synt) 		6 LEU A  61
ASP A  64
ASP A  68
ARG A  73
GLN A 126
THR A 152
 None
GRG  A 500 (-2.4A)
MG  A 400 (-2.6A)
GRG  A 500 (-2.9A)
GRG  A 500 ( 3.5A)
GRG  A 500 ( 4.6A)
 0.93A 4ng6A-2q80A:
11.5		 4ng6A-2q80A:
26.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2v4j SULFITE REDUCTASE,
DISSIMILATORY-TYPE
SUBUNIT ALPHA

(Desulfovibrio
vulgaris) 		PF01077
(NIR_SIR)
PF03460
(NIR_SIR_ferr) 		5 ASP A 163
THR A 198
GLN A 202
LEU A 205
THR A 173
 None
 1.12A 4ng6A-2v4jA:
undetectable		 4ng6A-2v4jA:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xsj SULFITE REDUCTASE
ALPHA SUBUNIT

(Desulfomicrobium
norvegicum) 		PF01077
(NIR_SIR)
PF03460
(NIR_SIR_ferr) 		5 ASP A 163
THR A 198
GLN A 202
LEU A 205
THR A 173
 None
 1.08A 4ng6A-2xsjA:
undetectable		 4ng6A-2xsjA:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3aq0 GERANYL DIPHOSPHATE
SYNTHASE

(Arabidopsis
thaliana) 		PF00348
(polyprenyl_synt) 		5 LEU A 104
ASP A 107
ASP A 111
ARG A 116
THR A 194
 None
MG  A1000 (-2.9A)
MG  A1001 (-2.8A)
FPP  A1002 (-2.9A)
ISY  A1003 (-4.7A)
 0.61A 4ng6A-3aq0A:
26.0		 4ng6A-3aq0A:
23.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3aq0 GERANYL DIPHOSPHATE
SYNTHASE

(Arabidopsis
thaliana) 		PF00348
(polyprenyl_synt) 		5 LEU A 104
ASP A 107
ASP A 111
ARG A 116
THR A 194
 None
MG  A1000 (-2.9A)
MG  A1001 (-2.8A)
FPP  A1002 (-2.9A)
ISY  A1003 (-4.7A)
 1.29A 4ng6A-3aq0A:
26.0		 4ng6A-3aq0A:
23.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3aqc COMPONENT B OF
HEXAPRENYL
DIPHOSPHATE SYNTHASE

(Micrococcus
luteus) 		PF00348
(polyprenyl_synt) 		5 ASP B  84
ASP B  88
THR B 171
GLN B 208
ASP B 211
 MG  B 326 (-2.6A)
MG  B 327 (-2.4A)
None
None
MG  B 328 (-3.1A)
 0.89A 4ng6A-3aqcB:
28.2		 4ng6A-3aqcB:
24.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3aqc COMPONENT B OF
HEXAPRENYL
DIPHOSPHATE SYNTHASE

(Micrococcus
luteus) 		PF00348
(polyprenyl_synt) 		6 LEU B  81
ASP B  84
ASP B  88
ARG B  93
THR B 171
GLN B 208
 None
MG  B 326 (-2.6A)
MG  B 327 (-2.4A)
2DE  B 329 (-3.8A)
None
None
 0.74A 4ng6A-3aqcB:
28.2		 4ng6A-3aqcB:
24.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lom GERANYLTRANSTRANSFER
ASE

(Legionella
pneumophila) 		PF00348
(polyprenyl_synt) 		5 LEU A  91
ASP A  94
ASP A 100
GLN A 168
THR A 193
 None
 1.20A 4ng6A-3lomA:
25.7		 4ng6A-3lomA:
24.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lom GERANYLTRANSTRANSFER
ASE

(Legionella
pneumophila) 		PF00348
(polyprenyl_synt) 		5 LEU A  91
ASP A 100
ARG A 105
GLN A 168
THR A 193
 None
 0.76A 4ng6A-3lomA:
25.7		 4ng6A-3lomA:
24.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lom GERANYLTRANSTRANSFER
ASE

(Legionella
pneumophila) 		PF00348
(polyprenyl_synt) 		5 LEU A  91
ASP A 100
GLN A 168
THR A 193
GLN A 231
 None
 0.89A 4ng6A-3lomA:
25.7		 4ng6A-3lomA:
24.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m0g FARNESYL DIPHOSPHATE
SYNTHASE

(Rhodobacter
capsulatus) 		PF00348
(polyprenyl_synt) 		5 LEU A  78
ASP A  87
ARG A  92
GLN A 153
THR A 179
 None
 0.51A 4ng6A-3m0gA:
24.7		 4ng6A-3m0gA:
25.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m9u FARNESYL-DIPHOSPHATE
SYNTHASE

(Lactobacillus
brevis) 		PF00348
(polyprenyl_synt) 		5 LEU A  86
ARG A 100
THR A 184
GLN A 221
ASP A 224
 GOL  A 310 ( 4.3A)
None
None
None
None
 0.94A 4ng6A-3m9uA:
25.5		 4ng6A-3m9uA:
24.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m9u FARNESYL-DIPHOSPHATE
SYNTHASE

(Lactobacillus
brevis) 		PF00348
(polyprenyl_synt) 		5 LEU A  86
ASP A  89
ARG A 100
GLN A 160
THR A 184
 GOL  A 310 ( 4.3A)
None
None
None
None
 1.13A 4ng6A-3m9uA:
25.5		 4ng6A-3m9uA:
24.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mm5 SULFITE REDUCTASE,
DISSIMILATORY-TYPE
SUBUNIT ALPHA

(Archaeoglobus
fulgidus) 		PF01077
(NIR_SIR)
PF03460
(NIR_SIR_ferr) 		5 ASP A 161
THR A 196
GLN A 200
LEU A 203
THR A 171
 None
 1.05A 4ng6A-3mm5A:
undetectable		 4ng6A-3mm5A:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mop INTERLEUKIN-1
RECEPTOR-ASSOCIATED
KINASE 4

(Homo sapiens) 		no annotation 5 LEU G 100
ASP G 103
THR G   9
THR G  80
ASP G  86
 None
 1.38A 4ng6A-3mopG:
undetectable		 4ng6A-3mopG:
14.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mzv DECAPRENYL
DIPHOSPHATE SYNTHASE

(Rhodobacter
capsulatus) 		PF00348
(polyprenyl_synt) 		5 LEU A  90
ASP A  93
ARG A 102
THR A 180
GLN A 217
 None
 0.77A 4ng6A-3mzvA:
26.0		 4ng6A-3mzvA:
25.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3npk GERANYLTRANSTRANSFER
ASE

(Campylobacter
jejuni) 		PF00348
(polyprenyl_synt) 		5 LEU A  75
ASP A  78
ARG A  89
GLN A 149
THR A 173
 None
 1.06A 4ng6A-3npkA:
26.1		 4ng6A-3npkA:
25.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3npk GERANYLTRANSTRANSFER
ASE

(Campylobacter
jejuni) 		PF00348
(polyprenyl_synt) 		5 LEU A  75
ASP A  84
ARG A  89
GLN A 149
THR A 173
 None
 0.44A 4ng6A-3npkA:
26.1		 4ng6A-3npkA:
25.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3or2 SULFITE REDCUTASE
SUBUNIT ALPHA

(Desulfovibrio
gigas) 		PF01077
(NIR_SIR) 		5 ASP A 163
THR A 198
GLN A 202
LEU A 205
THR A 173
 None
 1.12A 4ng6A-3or2A:
undetectable		 4ng6A-3or2A:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3p41 GERANYLTRANSTRANSFER
ASE

(Pseudomonas
protegens) 		PF00348
(polyprenyl_synt) 		6 LEU A  80
ASP A  83
ASP A  89
ARG A  94
GLN A 157
THR A 181
 None
MG  A 297 (-2.5A)
MG  A 297 (-2.5A)
DMA  A 300 (-2.9A)
DMA  A 300 (-3.6A)
None
 0.74A 4ng6A-3p41A:
24.1		 4ng6A-3p41A:
28.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3p8l GERANYLTRANSTRANSFER
ASE

(Enterococcus
faecalis) 		PF00348
(polyprenyl_synt) 		5 LEU A  79
ASP A  82
ARG A  93
GLN A 153
THR A 177
 None
 1.02A 4ng6A-3p8lA:
25.0		 4ng6A-3p8lA:
27.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3p8l GERANYLTRANSTRANSFER
ASE

(Enterococcus
faecalis) 		PF00348
(polyprenyl_synt) 		5 LEU A  79
ASP A  88
ARG A  93
GLN A 153
THR A 177
 None
 0.47A 4ng6A-3p8lA:
25.0		 4ng6A-3p8lA:
27.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3p8l GERANYLTRANSTRANSFER
ASE

(Enterococcus
faecalis) 		PF00348
(polyprenyl_synt) 		5 LEU A  79
ASP A  88
GLN A 153
THR A 177
GLN A 214
 None
 0.95A 4ng6A-3p8lA:
25.0		 4ng6A-3p8lA:
27.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3q1o GERANYLTRANSTRANSFER
ASE (ISPA)

(Helicobacter
pylori) 		PF00348
(polyprenyl_synt) 		5 ASP A  98
ARG A 103
GLN A 225
ASP A 228
LYS A 242
 MG  A 400 ( 3.2A)
DMA  A 501 (-3.0A)
DMA  A 501 ( 3.8A)
DMA  A 501 ( 3.5A)
DMA  A 501 (-2.7A)
 1.24A 4ng6A-3q1oA:
31.1		 4ng6A-3q1oA:
27.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3q1o GERANYLTRANSTRANSFER
ASE (ISPA)

(Helicobacter
pylori) 		PF00348
(polyprenyl_synt) 		9 LEU A  89
ASP A  92
ASP A  98
ARG A 103
GLN A 163
THR A 187
GLN A 225
ASP A 228
LYS A 242
 DMA  A 501 ( 4.8A)
MG  A 400 ( 2.8A)
MG  A 400 ( 3.2A)
DMA  A 501 (-3.0A)
DMA  A 501 (-3.6A)
DMA  A 500 (-3.4A)
DMA  A 501 ( 3.8A)
DMA  A 501 ( 3.5A)
DMA  A 501 (-2.7A)
 0.67A 4ng6A-3q1oA:
31.1		 4ng6A-3q1oA:
27.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qqv GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE

(Corynebacterium
glutamicum) 		PF00348
(polyprenyl_synt) 		6 LEU A 105
ASP A 108
ASP A 112
ARG A 117
GLN A 191
THR A 216
 None
MG  A 381 (-2.4A)
MG  A 381 (-2.8A)
DMA  A 384 (-3.0A)
DMA  A 384 (-3.9A)
DMA  A 383 ( 4.0A)
 0.99A 4ng6A-3qqvA:
33.6		 4ng6A-3qqvA:
28.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qqv GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE

(Corynebacterium
glutamicum) 		PF00348
(polyprenyl_synt) 		5 LEU A 105
ASP A 108
ASP A 112
ARG A 117
THR A 216
 None
MG  A 381 (-2.4A)
MG  A 381 (-2.8A)
DMA  A 384 (-3.0A)
DMA  A 383 ( 4.0A)
 1.40A 4ng6A-3qqvA:
33.6		 4ng6A-3qqvA:
28.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qqv GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE

(Corynebacterium
glutamicum) 		PF00348
(polyprenyl_synt) 		6 LEU A 105
ASP A 108
ASP A 112
ARG A 117
THR A 216
GLN A 254
 None
MG  A 381 (-2.4A)
MG  A 381 (-2.8A)
DMA  A 384 (-3.0A)
DMA  A 383 ( 4.0A)
DMA  A 383 (-3.2A)
 0.51A 4ng6A-3qqvA:
33.6		 4ng6A-3qqvA:
28.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qqv GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE

(Corynebacterium
glutamicum) 		PF00348
(polyprenyl_synt) 		5 LEU A 105
ASP A 108
ASP A 112
ARG A 117
TYR A 219
 None
MG  A 381 (-2.4A)
MG  A 381 (-2.8A)
DMA  A 384 (-3.0A)
DMA  A 384 ( 4.9A)
 0.66A 4ng6A-3qqvA:
33.6		 4ng6A-3qqvA:
28.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ts7 GERANYLTRANSTRANSFER
ASE

(Methylococcus
capsulatus) 		PF00348
(polyprenyl_synt) 		6 LEU A  85
ASP A  88
ASP A  94
ARG A  99
GLN A 162
THR A 186
 None
 1.03A 4ng6A-3ts7A:
24.5		 4ng6A-3ts7A:
25.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3uca GERANYLTRANSTRANSFER
ASE

(Clostridium
perfringens) 		PF00348
(polyprenyl_synt) 		5 LEU A  88
ASP A  97
ARG A 102
GLN A 163
THR A 188
 None
 0.51A 4ng6A-3ucaA:
26.8		 4ng6A-3ucaA:
25.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wjo OCTAPRENYL
DIPHOSPHATE SYNTHASE

(Escherichia
coli) 		PF00348
(polyprenyl_synt) 		5 LEU A  81
ARG A  93
THR A 171
GLN A 208
ASP A 211
 None
IPE  A 401 ( 4.2A)
IPE  A 402 ( 3.8A)
IPE  A 402 (-3.6A)
IPE  A 402 ( 4.6A)
 0.76A 4ng6A-3wjoA:
25.2		 4ng6A-3wjoA:
26.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wjo OCTAPRENYL
DIPHOSPHATE SYNTHASE

(Escherichia
coli) 		PF00348
(polyprenyl_synt) 		5 LEU A  81
ASP A  84
ARG A  93
THR A 171
GLN A 208
 None
IPE  A 401 (-2.6A)
IPE  A 401 ( 4.2A)
IPE  A 402 ( 3.8A)
IPE  A 402 (-3.6A)
 0.64A 4ng6A-3wjoA:
25.2		 4ng6A-3wjoA:
26.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wjo OCTAPRENYL
DIPHOSPHATE SYNTHASE

(Escherichia
coli) 		PF00348
(polyprenyl_synt) 		5 LEU A  81
ASP A  84
ASP A  88
ARG A  93
THR A 171
 None
IPE  A 401 (-2.6A)
IPE  A 401 (-3.3A)
IPE  A 401 ( 4.2A)
IPE  A 402 ( 3.8A)
 0.41A 4ng6A-3wjoA:
25.2		 4ng6A-3wjoA:
26.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wjo OCTAPRENYL
DIPHOSPHATE SYNTHASE

(Escherichia
coli) 		PF00348
(polyprenyl_synt) 		5 LEU A  81
ASP A  84
ASP A  88
ARG A  93
THR A 171
 None
IPE  A 401 (-2.6A)
IPE  A 401 (-3.3A)
IPE  A 401 ( 4.2A)
IPE  A 402 ( 3.8A)
 1.24A 4ng6A-3wjoA:
25.2		 4ng6A-3wjoA:
26.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3zou FARNESYL
PYROPHOSPHATE
SYNTHASE

(Pseudomonas
aeruginosa) 		PF00348
(polyprenyl_synt) 		6 LEU A  80
ASP A  83
ASP A  89
ARG A  94
GLN A 157
THR A 181
 None
MG  A1295 (-2.5A)
MG  A1295 (-2.4A)
GPP  A1297 (-3.0A)
GPP  A1297 (-3.7A)
None
 0.44A 4ng6A-3zouA:
23.5		 4ng6A-3zouA:
26.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3zou FARNESYL
PYROPHOSPHATE
SYNTHASE

(Pseudomonas
aeruginosa) 		PF00348
(polyprenyl_synt) 		5 LEU A  80
ASP A  83
ASP A  89
ARG A  94
THR A 181
 None
MG  A1295 (-2.5A)
MG  A1295 (-2.4A)
GPP  A1297 (-3.0A)
None
 1.24A 4ng6A-3zouA:
23.5		 4ng6A-3zouA:
26.49
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4e1e FARNESYL
PYROPHOSPHATE
SYNTHASE

(Trypanosoma
cruzi) 		PF00348
(polyprenyl_synt) 		11 LEU A  95
ASP A  98
ASP A 102
ARG A 107
THR A 163
GLN A 167
THR A 208
TYR A 211
GLN A 247
ASP A 250
LYS A 264
 None
MG  A 403 (-2.5A)
MG  A 403 (-2.4A)
0MW  A 404 (-2.7A)
None
0MW  A 404 (-3.7A)
IPE  A 405 ( 4.6A)
None
0MW  A 404 ( 3.8A)
MG  A 401 (-2.7A)
0MW  A 404 ( 3.0A)
 0.43A 4ng6A-4e1eA:
45.1		 4ng6A-4e1eA:
36.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4flc ADENYLOSUCCINATE
LYASE

(Homo sapiens) 		PF00206
(Lyase_1)
PF10397
(ADSL_C) 		5 LEU A 121
ASP A 117
THR A 239
THR A 244
ASP A 248
 None
 1.20A 4ng6A-4flcA:
undetectable		 4ng6A-4flcA:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fp4 POLYPRENYL
SYNTHETASE

(Pyrobaculum
calidifontis) 		PF00348
(polyprenyl_synt) 		6 ASP A  86
ASP A  90
ARG A  95
GLN A 147
THR A 163
GLN A 199
 UNX  A 302 ( 2.6A)
UNX  A 302 ( 3.2A)
UNX  A 302 ( 4.6A)
GER  A 301 ( 4.7A)
None
None
 0.86A 4ng6A-4fp4A:
20.4		 4ng6A-4fp4A:
23.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fp4 POLYPRENYL
SYNTHETASE

(Pyrobaculum
calidifontis) 		PF00348
(polyprenyl_synt) 		5 LEU A  83
ASP A  86
ASP A  90
ARG A  95
THR A 163
 UNL  A 303 ( 4.7A)
UNX  A 302 ( 2.6A)
UNX  A 302 ( 3.2A)
UNX  A 302 ( 4.6A)
None
 0.69A 4ng6A-4fp4A:
20.4		 4ng6A-4fp4A:
23.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gp1 POLYPRENYL
SYNTHETASE

(Pyrobaculum
calidifontis) 		PF00348
(polyprenyl_synt) 		5 LEU A  82
ASP A  85
ASP A  89
ARG A  94
THR A 185
 None
 0.61A 4ng6A-4gp1A:
28.0		 4ng6A-4gp1A:
26.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gp1 POLYPRENYL
SYNTHETASE

(Pyrobaculum
calidifontis) 		PF00348
(polyprenyl_synt) 		5 LEU A  82
ASP A  85
ASP A  89
ARG A  94
THR A 185
 None
 1.29A 4ng6A-4gp1A:
28.0		 4ng6A-4gp1A:
26.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4jzx FARNESYL
PYROPHOSPHATE
SYNTHASE

(Leishmania
major) 		PF00348
(polyprenyl_synt) 		5 ASP A  98
ARG A 107
GLN A 247
ASP A 250
LYS A 264
 CA  A 403 (-2.5A)
476  A 402 (-2.9A)
IPE  A 401 (-3.7A)
CA  A 404 (-3.0A)
476  A 402 (-2.9A)
 1.11A 4ng6A-4jzxA:
45.3		 4ng6A-4jzxA:
36.97
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4jzx FARNESYL
PYROPHOSPHATE
SYNTHASE

(Leishmania
major) 		PF00348
(polyprenyl_synt) 		11 LEU A  95
ASP A  98
ASP A 102
ARG A 107
THR A 163
GLN A 167
THR A 208
TYR A 211
GLN A 247
ASP A 250
LYS A 264
 None
CA  A 403 (-2.5A)
CA  A 403 (-2.5A)
476  A 402 (-2.9A)
476  A 402 (-4.8A)
476  A 402 (-3.5A)
IPE  A 401 ( 3.4A)
None
IPE  A 401 (-3.7A)
CA  A 404 (-3.0A)
476  A 402 (-2.9A)
 0.41A 4ng6A-4jzxA:
45.3		 4ng6A-4jzxA:
36.97
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4kk2 MONOTERPENE SYNTHASE
FDS-5, CHLOROPLASTIC
- FARNESYL
DIPHOSPHATE SYNTHASE
1 CHIMERA

(Artemisia
spiciformis) 		PF00348
(polyprenyl_synt) 		7 LEU A  94
ASP A  97
ARG A 106
THR A 161
GLN A 165
THR A 195
TYR A 198
 None
 0.72A 4ng6A-4kk2A:
40.7		 4ng6A-4kk2A:
46.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kkm POLYPRENYL
SYNTHETASE

(Zymomonas
mobilis) 		PF00348
(polyprenyl_synt) 		6 LEU A  83
ASP A  86
ASP A  92
ARG A  97
GLN A 159
THR A 185
 None
 0.90A 4ng6A-4kkmA:
26.1		 4ng6A-4kkmA:
29.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lfe GERANYLGERANYL
DIPHOSPHATE SYNTHASE

(Streptococcus
uberis) 		PF00348
(polyprenyl_synt) 		6 LEU A  75
ASP A  78
ARG A  89
GLN A 149
THR A 173
GLN A 210
 IPE  A 301 (-4.7A)
MG  A 302 (-2.5A)
IPE  A 301 (-2.8A)
IPE  A 301 ( 3.7A)
None
None
 0.94A 4ng6A-4lfeA:
25.9		 4ng6A-4lfeA:
25.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lfe GERANYLGERANYL
DIPHOSPHATE SYNTHASE

(Streptococcus
uberis) 		PF00348
(polyprenyl_synt) 		6 LEU A  75
ASP A  78
ASP A  84
ARG A  89
GLN A 149
THR A 173
 IPE  A 301 (-4.7A)
MG  A 302 (-2.5A)
MG  A 302 (-2.4A)
IPE  A 301 (-2.8A)
IPE  A 301 ( 3.7A)
None
 0.79A 4ng6A-4lfeA:
25.9		 4ng6A-4lfeA:
25.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lfe GERANYLGERANYL
DIPHOSPHATE SYNTHASE

(Streptococcus
uberis) 		PF00348
(polyprenyl_synt) 		5 LEU A  75
GLN A 149
THR A 173
GLN A 210
ASP A 213
 IPE  A 301 (-4.7A)
IPE  A 301 ( 3.7A)
None
None
None
 1.06A 4ng6A-4lfeA:
25.9		 4ng6A-4lfeA:
25.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lls GERANYLTRANSTRANSFER
ASE

(Roseobacter
denitrificans) 		PF00348
(polyprenyl_synt) 		5 ASP A  80
ARG A  91
GLN A 213
ASP A 216
LYS A 230
 CA  A 304 ( 2.9A)
GST  A 302 (-2.9A)
IPE  A 301 ( 4.1A)
CA  A 303 (-2.9A)
GST  A 302 (-2.7A)
 1.19A 4ng6A-4llsA:
29.7		 4ng6A-4llsA:
29.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lls GERANYLTRANSTRANSFER
ASE

(Roseobacter
denitrificans) 		PF00348
(polyprenyl_synt) 		9 LEU A  77
ASP A  80
ASP A  86
ARG A  91
GLN A 153
THR A 179
GLN A 213
ASP A 216
LYS A 230
 None
CA  A 304 ( 2.9A)
CA  A 305 (-2.3A)
GST  A 302 (-2.9A)
GST  A 302 (-3.7A)
IPE  A 301 (-4.2A)
IPE  A 301 ( 4.1A)
CA  A 303 (-2.9A)
GST  A 302 (-2.7A)
 0.62A 4ng6A-4llsA:
29.7		 4ng6A-4llsA:
29.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4p0v FARNESYL
PYROPHOSPHATE
SYNTHASE

(Homo sapiens) 		PF00348
(polyprenyl_synt) 		10 LEU A 100
ASP A 103
ASP A 107
ARG A 112
THR A 167
GLN A 171
THR A 201
GLN A 240
ASP A 243
LYS A 257
 None
MG  A 405 (-2.5A)
MG  A 405 (-2.4A)
ZOL  A 401 ( 2.7A)
None
ZOL  A 401 ( 3.8A)
ZOL  A 401 (-3.7A)
ZOL  A 401 (-3.5A)
MG  A 404 (-2.8A)
1WO  A 402 ( 2.8A)
 0.53A 4ng6A-4p0vA:
55.0		 4ng6A-4p0vA:
99.71
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4p0v FARNESYL
PYROPHOSPHATE
SYNTHASE

(Homo sapiens) 		PF00348
(polyprenyl_synt) 		10 LEU A 100
ASP A 103
ASP A 107
ARG A 112
THR A 167
THR A 201
TYR A 204
GLN A 240
ASP A 243
LYS A 257
 None
MG  A 405 (-2.5A)
MG  A 405 (-2.4A)
ZOL  A 401 ( 2.7A)
None
ZOL  A 401 (-3.7A)
None
ZOL  A 401 (-3.5A)
MG  A 404 (-2.8A)
1WO  A 402 ( 2.8A)
 0.33A 4ng6A-4p0vA:
55.0		 4ng6A-4p0vA:
99.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qdr NEUROPILIN-2

(Homo sapiens) 		PF00754
(F5_F8_type_C) 		5 ASP A 301
THR A 298
THR A 305
GLN A 308
ASP A 315
 None
 1.30A 4ng6A-4qdrA:
undetectable		 4ng6A-4qdrA:
22.45
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4rxe FARNESYL
PYROPHOSPHATE
SYNTHASE

(Trypanosoma
brucei) 		PF00348
(polyprenyl_synt) 		9 ASP A 103
ASP A 107
ARG A 112
THR A 168
GLN A 172
THR A 213
TYR A 216
GLN A 252
ASP A 255
 MG  A3004 (-2.5A)
MG  A3004 (-2.3A)
3YQ  A3001 (-2.8A)
None
MG  A3004 ( 3.8A)
3YQ  A3001 (-4.2A)
3YQ  A3001 (-4.7A)
3YQ  A3001 ( 4.2A)
MG  A3003 ( 2.9A)
 0.57A 4ng6A-4rxeA:
43.8		 4ng6A-4rxeA:
38.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4rxe FARNESYL
PYROPHOSPHATE
SYNTHASE

(Trypanosoma
brucei) 		PF00348
(polyprenyl_synt) 		8 ASP A 103
ASP A 107
GLN A 172
THR A 213
TYR A 216
GLN A 252
ASP A 255
LYS A 269
 MG  A3004 (-2.5A)
MG  A3004 (-2.3A)
MG  A3004 ( 3.8A)
3YQ  A3001 (-4.2A)
3YQ  A3001 (-4.7A)
3YQ  A3001 ( 4.2A)
MG  A3003 ( 2.9A)
3YQ  A3001 (-3.1A)
 0.90A 4ng6A-4rxeA:
43.8		 4ng6A-4rxeA:
38.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4rxe FARNESYL
PYROPHOSPHATE
SYNTHASE

(Trypanosoma
brucei) 		PF00348
(polyprenyl_synt) 		9 LEU A 100
ASP A 103
ASP A 107
ARG A 112
THR A 168
GLN A 172
THR A 213
TYR A 216
ASP A 255
 3YQ  A3001 ( 4.6A)
MG  A3004 (-2.5A)
MG  A3004 (-2.3A)
3YQ  A3001 (-2.8A)
None
MG  A3004 ( 3.8A)
3YQ  A3001 (-4.2A)
3YQ  A3001 (-4.7A)
MG  A3003 ( 2.9A)
 0.69A 4ng6A-4rxeA:
43.8		 4ng6A-4rxeA:
38.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4wk5 GERANYLTRANSTRANSFER
ASE

(Thermotoga
neapolitana) 		PF00348
(polyprenyl_synt) 		5 LEU A  71
ASP A  80
ARG A  85
THR A 164
GLN A 198
 None
 0.62A 4ng6A-4wk5A:
24.7		 4ng6A-4wk5A:
28.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4wk5 GERANYLTRANSTRANSFER
ASE

(Thermotoga
neapolitana) 		PF00348
(polyprenyl_synt) 		5 LEU A  71
ASP A  80
THR A 164
GLN A 198
ASP A 201
 None
 0.68A 4ng6A-4wk5A:
24.7		 4ng6A-4wk5A:
28.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ahu FARNESYL
PYROPHOSPHATE
SYNTHASE

(Trypanosoma
brucei) 		PF00348
(polyprenyl_synt) 		5 ASP B 107
ARG B 112
GLN B 252
ASP B 255
LYS B 269
 MG  B1369 (-2.2A)
G76  B1368 (-2.8A)
G76  B1368 ( 4.0A)
MG  B1371 ( 3.0A)
G76  B1368 (-3.1A)
 1.20A 4ng6A-5ahuB:
18.6		 4ng6A-5ahuB:
30.79
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ahu FARNESYL
PYROPHOSPHATE
SYNTHASE

(Trypanosoma
brucei) 		PF00348
(polyprenyl_synt) 		11 LEU B 100
ASP B 103
ASP B 107
ARG B 112
THR B 168
GLN B 172
THR B 213
TYR B 216
GLN B 252
ASP B 255
LYS B 269
 None
MG  B1370 (-2.5A)
MG  B1369 (-2.2A)
G76  B1368 (-2.8A)
None
G76  B1368 ( 4.1A)
G76  B1368 (-4.2A)
None
G76  B1368 ( 4.0A)
MG  B1371 ( 3.0A)
G76  B1368 (-3.1A)
 0.53A 4ng6A-5ahuB:
18.6		 4ng6A-5ahuB:
30.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ayp FARNESYL DIPHOSPHATE
SYNTHASE

(Geobacillus
stearothermophilus) 		PF00348
(polyprenyl_synt) 		6 LEU A  83
ASP A  86
ASP A  92
ARG A  97
GLN A 160
THR A 184
 None
 0.89A 4ng6A-5aypA:
23.6		 4ng6A-5aypA:
25.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ayp FARNESYL DIPHOSPHATE
SYNTHASE

(Geobacillus
stearothermophilus) 		PF00348
(polyprenyl_synt) 		6 LEU A  83
ASP A  86
ASP A  92
ARG A  97
THR A 184
GLN A 160
 None
 1.50A 4ng6A-5aypA:
23.6		 4ng6A-5aypA:
25.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5e8h GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE 3,
CHLOROPLASTIC

(Arabidopsis
thaliana) 		PF00348
(polyprenyl_synt) 		5 LEU A  89
ASP A  92
ARG A 103
GLN A 166
THR A 193
 None
 1.23A 4ng6A-5e8hA:
23.1		 4ng6A-5e8hA:
28.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5e8k GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE 10,
MITOCHONDRIAL

(Arabidopsis
thaliana) 		PF00348
(polyprenyl_synt) 		5 LEU A  88
ASP A  97
ARG A 102
GLN A 163
THR A 191
 None
 1.00A 4ng6A-5e8kA:
22.5		 4ng6A-5e8kA:
25.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5e8l HETERODIMERIC
GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE LARGE
SUBUNIT 1,
CHLOROPLASTIC

(Arabidopsis
thaliana) 		PF00348
(polyprenyl_synt) 		5 LEU A  88
ASP A  91
ASP A  97
ARG A 102
GLN A 166
 None
 1.13A 4ng6A-5e8lA:
23.8		 4ng6A-5e8lA:
25.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5e8l HETERODIMERIC
GERANYLGERANYL
PYROPHOSPHATE
SYNTHASE LARGE
SUBUNIT 1,
CHLOROPLASTIC

(Arabidopsis
thaliana) 		PF00348
(polyprenyl_synt) 		5 LEU A  88
ASP A  91
ASP A  97
GLN A 166
THR A 193
 None
 1.20A 4ng6A-5e8lA:
23.8		 4ng6A-5e8lA:
25.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ern FUSICOCCADIENE
SYNTHASE

(Diaporthe
amygdali) 		PF00348
(polyprenyl_synt) 		5 LEU A  85
ASP A  88
GLN A 150
THR A 176
GLN A 216
 None
 0.97A 4ng6A-5ernA:
13.4		 4ng6A-5ernA:
26.78
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5hn7 FARNESYL
PYROPHOSPHATE
SYNTHASE, PUTATIVE

(Plasmodium
vivax) 		PF00348
(polyprenyl_synt) 		10 ASP A 126
ASP A 130
ARG A 135
THR A 191
GLN A 195
THR A 244
TYR A 247
GLN A 284
ASP A 287
LYS A 301
 04M  A 401 ( 4.0A)
None
04M  A 401 (-3.5A)
04M  A 401 (-4.8A)
04M  A 401 (-3.3A)
04M  A 401 ( 3.8A)
04M  A 401 (-4.5A)
None
None
04M  A 401 ( 3.9A)
 0.53A 4ng6A-5hn7A:
43.7		 4ng6A-5hn7A:
33.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5l7v GLYCOSIDE HYDROLASE

(Bacteroides
vulgatus) 		PF13320
(DUF4091) 		5 LEU A 462
GLN A 297
THR A 245
TYR A 301
GLN A 207
 None
 1.37A 4ng6A-5l7vA:
undetectable		 4ng6A-5l7vA:
20.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mrw POTASSIUM-TRANSPORTI
NG ATPASE
POTASSIUM-BINDING
SUBUNIT

(Escherichia
coli) 		PF03814
(KdpA) 		5 LEU A 133
THR A 123
GLN A  84
LEU A  97
TYR A 118
 None
 1.31A 4ng6A-5mrwA:
undetectable		 4ng6A-5mrwA:
19.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xn6 OS07G0580900 PROTEIN

(Oryza sativa) 		PF00348
(polyprenyl_synt) 		5 LEU A  82
ASP A  85
ASP A  91
THR A 191
GLN A 228
 None
 1.02A 4ng6A-5xn6A:
24.2		 4ng6A-5xn6A:
25.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xn6 OS07G0580900 PROTEIN

(Oryza sativa) 		PF00348
(polyprenyl_synt) 		5 LEU A  82
ASP A  85
GLN A 165
THR A 191
GLN A 228
 None
 1.25A 4ng6A-5xn6A:
24.2		 4ng6A-5xn6A:
25.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6b07 FARNESYL DIPHOSPHATE
SYNTHASE

(Choristoneura
fumiferana) 		no annotation 10 ASP A 147
ASP A 151
ARG A 156
THR A 211
GLN A 215
THR A 245
TYR A 248
GLN A 284
ASP A 287
LYS A 301
 MG  A 402 (-2.6A)
MG  A 402 (-2.5A)
C6M  A 401 (-2.7A)
None
C6M  A 401 (-3.3A)
C6M  A 401 (-3.6A)
None
C6M  A 401 (-3.7A)
MG  A 404 ( 2.7A)
C6M  A 401 (-2.9A)
 0.61A 4ng6A-6b07A:
24.5		 4ng6A-6b07A:
13.99