SIMILAR PATTERNS OF AMINO ACIDS FOR 4MFP_B_GCSB503

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4mfz DBV8 PROTEIN

(Nonomuraea
gerenzanensis) 		no annotation 4 GLN A 142
MET A 161
TRP A 163
TRP A 164
 None
 1.18A 4mfpA-4mfzA:
43.5		 4mfpA-4mfzA:
72.46
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4q38 PUTATIVE
UNCHARACTERIZED
PROTEIN TCP24

(Actinoplanes
teichomyceticus) 		no annotation 5 GLN A 142
MET A 161
TRP A 163
TRP A 164
PHE A 281
 TEC  A 404 ( 4.0A)
TEC  A 404 (-4.3A)
TEC  A 404 (-4.6A)
TEC  A 404 (-3.7A)
COA  A 403 (-3.4A)
 0.34A 4mfpA-4q38A:
50.5		 4mfpA-4q38A:
97.68