SIMILAR PATTERNS OF AMINO ACIDS FOR 4LRH_C_FOLC301

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4e84 D-BETA-D-HEPTOSE
7-PHOSPHATE KINASE


(Burkholderia
cenocepacia)
PF00294
(PfkB)
5 ASP A 270
GLN A 122
ARG A 115
ARG A 125
TYR A 159
M7B  A 502 (-3.1A)
None
M7B  A 502 (-3.2A)
M7B  A 502 (-3.1A)
M7B  A 502 (-4.5A)
1.22A 4lrhC-4e84A:
0.0
4lrhC-4e84A:
18.48
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4kmz FOLATE RECEPTOR BETA

(Homo sapiens)
PF03024
(Folate_rec)
12 TYR A  76
ASP A  97
TYR A 101
GLN A 116
TRP A 118
ARG A 119
ARG A 122
HIS A 151
TRP A 154
TRP A 156
TRP A 187
TYR A 191
FOL  A 301 (-3.8A)
FOL  A 301 (-2.8A)
FOL  A 301 (-3.8A)
FOL  A 301 ( 4.8A)
FOL  A 301 (-4.0A)
FOL  A 301 (-3.0A)
FOL  A 301 ( 4.4A)
FOL  A 301 (-3.9A)
None
FOL  A 301 (-3.7A)
FOL  A 301 (-3.5A)
FOL  A 301 (-4.1A)
0.49A 4lrhC-4kmzA:
34.7
4lrhC-4kmzA:
77.36
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4lrh FOLATE RECEPTOR
ALPHA


(Homo sapiens)
PF03024
(Folate_rec)
12 TYR A  60
ASP A  81
TYR A  85
GLN A 100
TRP A 102
ARG A 103
ARG A 106
HIS A 135
TRP A 138
TRP A 140
TRP A 171
TYR A 175
FOL  A 301 (-3.9A)
FOL  A 301 (-2.7A)
FOL  A 301 (-4.1A)
FOL  A 301 (-4.3A)
FOL  A 301 (-4.2A)
FOL  A 301 (-3.2A)
FOL  A 301 (-3.8A)
FOL  A 301 (-4.1A)
None
FOL  A 301 (-3.6A)
FOL  A 301 (-3.7A)
FOL  A 301 (-4.1A)
0.25A 4lrhC-4lrhA:
37.2
4lrhC-4lrhA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4lrh FOLATE RECEPTOR
ALPHA


(Homo sapiens)
PF03024
(Folate_rec)
5 TYR A  85
ARG A 103
ARG A 106
HIS A 135
TRP A 134
FOL  A 301 (-4.1A)
FOL  A 301 (-3.2A)
FOL  A 301 (-3.8A)
FOL  A 301 (-4.1A)
None
1.33A 4lrhC-4lrhA:
37.2
4lrhC-4lrhA:
100.00