SIMILAR PATTERNS OF AMINO ACIDS FOR 4KT0_B_PQNB2002
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1u0k | GENE PRODUCT PA4716 (Pseudomonasaeruginosa) |
PF02567(PhzC-PhzF) | 5 | TRP A 6SER A 109TRP A 96ALA A 80LEU A 83 | None | 1.35A | 4kt0B-1u0kA:0.0 | 4kt0B-1u0kA:18.85 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 4rku | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A1 (Pisum sativum) |
PF00223(PsaA_PsaB) | 7 | TRP A 55MET A 691SER A 695ARG A 697TRP A 700ALA A 724LEU A 725 | CLA A1139 (-4.1A)CLA A9013 ( 3.6A)PQN A5001 (-3.5A)NonePQN A5001 ( 3.4A)PQN A5001 (-3.4A)PQN A5001 ( 3.7A) | 0.50A | 4kt0B-4rkuA:37.8 | 4kt0B-4rkuA:46.81 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 4rku | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A2 (Pisum sativum) |
PF00223(PsaA_PsaB) | 9 | TRP B 22MET B 662SER B 666TRP B 667ARG B 668TRP B 671ALA B 699LEU B 700ALA B 705 | CLA B1238 ( 4.0A)CLA B9023 ( 3.3A)PQN B5002 (-3.2A)NoneNonePQN B5002 ( 3.3A)PQN B5002 (-3.2A)PQN B5002 (-3.7A)PQN B5002 (-3.4A) | 0.29A | 4kt0B-4rkuB:48.5 | 4kt0B-4rkuB:78.17 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5lki | TCDA1 (Photorhabdusluminescens) |
PF03538(VRP1) | 5 | TRP A1598SER A1095ARG A1301ALA A1583LEU A1584 | None | 1.47A | 4kt0B-5lkiA:0.0 | 4kt0B-5lkiA:14.33 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5oy0 | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A1 (Synechocystissp. PCC 6803) |
no annotation | 7 | TRP 1 49MET 1 684SER 1 688ARG 1 690TRP 1 693ALA 1 717LEU 1 718 | CLA 1 840 (-4.7A)CLA 1 802 ( 3.2A)PQN 1 842 (-3.4A)NonePQN 1 842 ( 3.3A)PQN 1 842 (-3.2A)PQN 1 842 ( 3.6A) | 0.50A | 4kt0B-5oy01:35.6 | 4kt0B-5oy01:7.46 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 5oy0 | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A2 (Synechocystissp. PCC 6803) |
no annotation | 9 | TRP b 22MET b 659SER b 663TRP b 664ARG b 665TRP b 668ALA b 696LEU b 697ALA b 702 | CLA b1841 ( 4.0A)CLA b1807 ( 3.2A)PQN b1844 (-3.7A)NoneNonePQN b1844 ( 3.4A)PQN b1844 (-3.2A)PQN b1844 ( 3.8A)PQN b1844 (-3.1A) | 0.34A | 4kt0B-5oy0b:44.9 | 4kt0B-5oy0b:100.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6fos | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A1 (Cyanidioschyzonmerolae) |
no annotation | 6 | MET A 681SER A 685ARG A 687TRP A 690ALA A 714LEU A 715 | PQN A2001 ( 3.3A)PQN A2001 (-4.4A)NonePQN A2001 ( 3.2A)PQN A2001 (-3.2A)PQN A2001 (-3.7A) | 0.91A | 4kt0B-6fosA:35.2 | 4kt0B-6fosA:8.87 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6fos | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A1 (Cyanidioschyzonmerolae) |
no annotation | 6 | TRP A 46SER A 685ARG A 687TRP A 690ALA A 714LEU A 715 | NonePQN A2001 (-4.4A)NonePQN A2001 ( 3.2A)PQN A2001 (-3.2A)PQN A2001 (-3.7A) | 0.81A | 4kt0B-6fosA:35.2 | 4kt0B-6fosA:8.87 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6fos | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A2 (Cyanidioschyzonmerolae) |
no annotation | 8 | TRP B 22MET B 660SER B 664ARG B 666TRP B 669ALA B 697LEU B 698ALA B 703 | NonePQN B2002 ( 3.2A)CLA B1023 (-4.5A)NonePQN B2002 (-3.3A)PQN B2002 (-3.1A)PQN B2002 (-3.6A)PQN B2002 (-3.4A) | 0.82A | 4kt0B-6fosB:32.8 | 4kt0B-6fosB:10.72 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6fos | PHOTOSYSTEM I P700CHLOROPHYLL AAPOPROTEIN A2 (Cyanidioschyzonmerolae) |
no annotation | 8 | TRP B 22SER B 664TRP B 665ARG B 666TRP B 669ALA B 697LEU B 698ALA B 703 | NoneCLA B1023 (-4.5A)NoneNonePQN B2002 (-3.3A)PQN B2002 (-3.1A)PQN B2002 (-3.6A)PQN B2002 (-3.4A) | 1.05A | 4kt0B-6fosB:32.8 | 4kt0B-6fosB:10.72 |