SIMILAR PATTERNS OF AMINO ACIDS FOR 4K37_B_SAMB504_0
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1c30 | CARBAMOYL PHOSPHATESYNTHETASE: LARGESUBUNIT (Escherichiacoli) |
PF02142(MGS)PF02786(CPSase_L_D2)PF02787(CPSase_L_D3) | 5 | GLU A 299ASN A 301SER A 305ILE A 319LEU A 326 | MN A4001 (-2.0A) MN A4001 (-2.4A)NoneNoneNone | 1.45A | 4k37B-1c30A:undetectable | 4k37B-1c30A:14.79 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1ckm | MRNA CAPPING ENZYME (ParameciumbursariaChlorella virus1) |
PF01331(mRNA_cap_enzyme)PF03919(mRNA_cap_C) | 5 | TYR A 226LEU A 46VAL A 149ILE A 127LEU A 56 | None | 1.42A | 4k37B-1ckmA:undetectable | 4k37B-1ckmA:21.52 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1eqf | RNA POLYMERASE IITRANSCRIPTIONINITIATION FACTOR (Homo sapiens) |
PF00439(Bromodomain) | 5 | ASN A1455SER A1456LEU A1466ILE A1469LEU A1399 | None | 1.29A | 4k37B-1eqfA:undetectable | 4k37B-1eqfA:24.21 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1g0u | PROTEASOME COMPONENTPUP2 (Saccharomycescerevisiae) |
PF00227(Proteasome)PF10584(Proteasome_A_N) | 5 | GLN D 173ASN D 161LEU D 176VAL D 193ILE D 38 | None | 1.45A | 4k37B-1g0uD:undetectable | 4k37B-1g0uD:21.53 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1hr7 | MITOCHONDRIALPROCESSING PEPTIDASEALPHA SUBUNIT (Saccharomycescerevisiae) |
PF00675(Peptidase_M16)PF05193(Peptidase_M16_C) | 5 | TYR A 323GLN A 260ARG A 97LEU A 158ILE A 328 | None | 1.44A | 4k37B-1hr7A:undetectable | 4k37B-1hr7A:23.21 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1krh | BENZOATE1,2-DIOXYGENASEREDUCTASE (Acinetobactersp.) |
PF00111(Fer2)PF00175(NAD_binding_1)PF00970(FAD_binding_6) | 5 | TYR A 271GLU A 233GLN A 258LEU A 226ILE A 222 | None | 1.48A | 4k37B-1krhA:0.5 | 4k37B-1krhA:18.91 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1tv8 | MOLYBDENUM COFACTORBIOSYNTHESIS PROTEINA (Staphylococcusaureus) |
PF04055(Radical_SAM)PF06463(Mob_synth_C)PF13394(Fer4_14) | 6 | TYR A 30GLU A 76ASN A 104SER A 126VAL A 167ILE A 194 | SAM A1501 ( 4.5A)SAM A1501 (-4.4A)SF4 A1401 ( 4.4A)SAM A1501 ( 2.4A)SAM A1501 (-4.5A)DTU A1502 ( 4.7A) | 0.96A | 4k37B-1tv8A:18.9 | 4k37B-1tv8A:22.89 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1woy | METHIONYL-TRNASYNTHETASE (Thermusthermophilus) |
PF00133(tRNA-synt_1)PF09334(tRNA-synt_1g) | 5 | ARG A 474LEU A 475VAL A 473ILE A 450LEU A 469 | None | 1.42A | 4k37B-1woyA:0.8 | 4k37B-1woyA:21.65 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2a2d | N-ACETYLGALACTOSAMINE KINASE (Homo sapiens) |
PF00288(GHMP_kinases_N)PF08544(GHMP_kinases_C)PF10509(GalKase_gal_bdg) | 5 | GLU A 49ASN A 45LEU A 144ILE A 138LEU A 150 | A2G A 459 (-3.5A)NoneNoneNoneANP A 461 (-4.6A) | 1.17A | 4k37B-2a2dA:undetectable | 4k37B-2a2dA:21.80 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2bol | SMALL HEAT SHOCKPROTEIN (Taenia saginata) |
PF00011(HSP20) | 5 | ASN A 119LEU A 181VAL A 116ILE A 183LEU A 162 | None | 1.44A | 4k37B-2bolA:undetectable | 4k37B-2bolA:20.75 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2h6t | CANDIDAPEPSIN-3 (Candidaalbicans) |
PF00026(Asp) | 5 | TYR A 318LEU A 186VAL A 188ILE A 196LEU A 216 | None | 1.40A | 4k37B-2h6tA:undetectable | 4k37B-2h6tA:19.43 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2hh9 | THIAMINPYROPHOSPHOKINASE (Candidaalbicans) |
PF04263(TPK_catalytic)PF04265(TPK_B1_binding) | 5 | TYR A 247GLN A 14SER A 305LEU A 18ILE A 20 | None | 1.48A | 4k37B-2hh9A:1.8 | 4k37B-2hh9A:21.93 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2q9u | A-TYPE FLAVOPROTEIN (Giardiaintestinalis) |
no annotation | 5 | TYR A 332TYR A 33GLU A 87LEU A 204LEU A 303 | NoneNoneFEO A 701 (-2.9A)NoneNone | 1.34A | 4k37B-2q9uA:undetectable | 4k37B-2q9uA:22.81 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2wzs | PUTATIVEALPHA-1,2-MANNOSIDASE (Bacteroidesthetaiotaomicron) |
PF07971(Glyco_hydro_92) | 5 | TYR A 361ASN A 685LEU A 681ILE A 289LEU A 286 | GOL A 802 (-4.5A)NoneNoneNoneNone | 1.38A | 4k37B-2wzsA:undetectable | 4k37B-2wzsA:19.03 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2xwu | IMPORTIN13 (Homo sapiens) |
PF03810(IBN_N)PF08389(Xpo1) | 5 | GLU B 622LEU B 644VAL B 705ILE B 708LEU B 727 | None | 1.50A | 4k37B-2xwuB:undetectable | 4k37B-2xwuB:15.30 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2z81 | TOLL-LIKE RECEPTOR2, VARIABLELYMPHOCYTE RECEPTORB (Eptatretusburgeri;Mus musculus) |
PF11921(DUF3439)PF13306(LRR_5)PF13516(LRR_6)PF13855(LRR_8) | 5 | SER A 249LEU A 221VAL A 224ILE A 220LEU A 205 | None | 1.07A | 4k37B-2z81A:undetectable | 4k37B-2z81A:21.94 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3bws | PROTEIN LP49 (Leptospirainterrogans) |
PF10282(Lactonase) | 5 | ASN A 371SER A 343VAL A 332ILE A 331LEU A 241 | None | 1.40A | 4k37B-3bwsA:undetectable | 4k37B-3bwsA:21.81 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3nv9 | MALIC ENZYME (Entamoebahistolytica) |
PF00390(malic)PF03949(Malic_M) | 5 | TYR A 271GLN A 195ASN A 174LEU A 179VAL A 181 | NoneNoneGOL A 499 ( 4.9A)NoneNone | 1.44A | 4k37B-3nv9A:undetectable | 4k37B-3nv9A:21.37 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3q3h | HMW1C-LIKEGLYCOSYLTRANSFERASE (Actinobacilluspleuropneumoniae) |
no annotation | 5 | GLU A 580ASN A 577VAL A 461ILE A 433LEU A 450 | None | 1.41A | 4k37B-3q3hA:2.2 | 4k37B-3q3hA:19.72 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3qa8 | MGC80376 PROTEIN (Xenopus laevis) |
PF00069(Pkinase) | 5 | ASN A 316SER A 319LEU A 403VAL A 605LEU A 440 | None | 1.47A | 4k37B-3qa8A:undetectable | 4k37B-3qa8A:18.58 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3whe | HEMAGGLUTININ (Influenza Avirus) |
PF00509(Hemagglutinin) | 5 | ASN A 248SER A 247LEU A 251VAL A 182ILE A 252 | None | 1.39A | 4k37B-3wheA:undetectable | 4k37B-3wheA:19.17 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4ayg | GLUCANSUCRASE (Lactobacillusreuteri) |
PF01473(CW_binding_1)PF02324(Glyco_hydro_70) | 5 | TYR A1041GLU A 996ASN A 999LEU A1004ILE A1022 | None | 1.44A | 4k37B-4aygA:1.8 | 4k37B-4aygA:16.71 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4cca | SYNTAXIN-BINDINGPROTEIN 2 (Homo sapiens) |
PF00995(Sec1) | 5 | TYR A 191GLU A 170LEU A 206ILE A 189LEU A 231 | None | 1.49A | 4k37B-4ccaA:undetectable | 4k37B-4ccaA:19.62 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4fvv | NEUROTOXIN (Clostridiumbotulinum) |
PF07951(Toxin_R_bind_C)PF07953(Toxin_R_bind_N) | 5 | ASN A1125LEU A1193VAL A1191ILE A1261LEU A1235 | None | 1.45A | 4k37B-4fvvA:undetectable | 4k37B-4fvvA:22.69 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4hfn | ALLYL ALCOHOLDEHYDROGENASE (Nicotianatabacum) |
PF00107(ADH_zinc_N)PF16884(ADH_N_2) | 5 | TYR A 294TYR A 130GLU A 311VAL A 298ILE A 299 | None | 1.19A | 4k37B-4hfnA:undetectable | 4k37B-4hfnA:22.50 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 4k37 | ANAEROBICSULFATASE-MATURATINGENZYME (Clostridiumperfringens) |
PF04055(Radical_SAM)PF13186(SPASM)PF13353(Fer4_12) | 6 | TYR A 21TYR A 24GLU A 67GLN A 64ASN A 100LEU A 195 | SAM A 504 (-4.6A)SAM A 504 ( 3.4A)SAM A 504 (-4.1A)NoneSF4 A 503 ( 4.2A)SAM A 504 (-4.1A) | 0.98A | 4k37B-4k37A:59.7 | 4k37B-4k37A:100.00 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 4k37 | ANAEROBICSULFATASE-MATURATINGENZYME (Clostridiumperfringens) |
PF04055(Radical_SAM)PF13186(SPASM)PF13353(Fer4_12) | 11 | TYR A 21TYR A 24GLU A 67GLN A 98ASN A 100SER A 122ARG A 134LEU A 163VAL A 165ILE A 192LEU A 195 | SAM A 504 (-4.6A)SAM A 504 ( 3.4A)SAM A 504 (-4.1A)SAM A 504 (-4.4A)SF4 A 503 ( 4.2A)SAM A 504 (-2.5A)SAM A 504 ( 3.5A)SAM A 504 (-3.8A)SAM A 504 (-4.7A)SAM A 504 (-4.0A)SAM A 504 (-4.1A) | 0.20A | 4k37B-4k37A:59.7 | 4k37B-4k37A:100.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4m77 | U6 SNRNA-ASSOCIATEDSM-LIKE PROTEIN LSM8 (Saccharomycescerevisiae) |
PF01423(LSM) | 5 | GLN A 54ASN A 40ARG A 12LEU A 38ILE A 15 | None | 1.17A | 4k37B-4m77A:undetectable | 4k37B-4m77A:14.82 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4psp | ALPHA-FUCOSIDASEGH29 (Fusariumgraminearum) |
PF01120(Alpha_L_fucos)PF16757(Fucosidase_C) | 5 | ASN A 433LEU A 471VAL A 429ILE A 473LEU A 450 | NoneNoneTRS A 618 (-3.9A)NoneNone | 1.31A | 4k37B-4pspA:2.7 | 4k37B-4pspA:20.49 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4v19 | MITORIBOSOMALPROTEIN BL31M,MRPL55 (Sus scrofa) |
PF09776(Mitoc_L55) | 5 | ARG 4 73LEU 4 57VAL 4 55ILE 4 67LEU 4 52 | None | 1.23A | 4k37B-4v194:undetectable | 4k37B-4v194:14.86 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4wb0 | BROAD SPECIFICITYAMINOTRANSFERASE (Leishmaniamexicana) |
PF00155(Aminotran_1_2) | 5 | TYR A 93ASN A 101VAL A 249ILE A 247LEU A 241 | None | 1.48A | 4k37B-4wb0A:undetectable | 4k37B-4wb0A:21.03 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5buk | FADH2-DEPENDENTHALOGENASE (Streptomycessp. CNQ-418) |
PF04820(Trp_halogenase) | 5 | SER A 35ARG A 145VAL A 146ILE A 10LEU A 184 | FAD A 501 (-3.2A)FAD A 501 (-3.5A)FAD A 501 (-4.0A)FAD A 501 (-4.7A)None | 1.49A | 4k37B-5bukA:undetectable | 4k37B-5bukA:22.25 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5dds | CRMG (Actinoalloteichussp. WH1-2216-6) |
PF00202(Aminotran_3) | 5 | GLU A 250ARG A 303LEU A 308ILE A 279LEU A 203 | None | 1.38A | 4k37B-5ddsA:undetectable | 4k37B-5ddsA:21.25 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5gq0 | EPITHIOSPECIFIERPROTEIN (Arabidopsisthaliana) |
no annotation | 5 | TYR B 306GLU B 41ARG B 80ILE B 28LEU B 318 | None | 1.47A | 4k37B-5gq0B:undetectable | 4k37B-5gq0B:22.27 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5ip9 | DNA-DIRECTED RNAPOLYMERASE IISUBUNIT RPB2 (Saccharomycescerevisiae) |
PF00562(RNA_pol_Rpb2_6)PF04560(RNA_pol_Rpb2_7)PF04561(RNA_pol_Rpb2_2)PF04563(RNA_pol_Rpb2_1)PF04565(RNA_pol_Rpb2_3)PF04566(RNA_pol_Rpb2_4)PF04567(RNA_pol_Rpb2_5) | 5 | GLN B 47ASN B 52SER B 50LEU B 408LEU B 416 | None | 1.25A | 4k37B-5ip9B:undetectable | 4k37B-5ip9B:15.16 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5liv | CYTOCHROME P450CYP260A1,CYTOCHROMEP450 CYP260A1 (Sorangiumcellulosum) |
PF00067(p450) | 5 | GLU A 151SER A 159LEU A 182VAL A 163LEU A 414 | None | 1.48A | 4k37B-5livA:undetectable | 4k37B-5livA:19.96 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5n2g | DNA POLYMERASE (Vaccinia virus) |
no annotation | 5 | ASN A 720ARG A 727LEU A 783ILE A 778LEU A 712 | None | 1.27A | 4k37B-5n2gA:undetectable | 4k37B-5n2gA:undetectable | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5n2g | DNA POLYMERASE (Vaccinia virus) |
no annotation | 5 | TYR A 697TYR A 550ASN A 785VAL A 782ILE A 778 | None | 1.45A | 4k37B-5n2gA:undetectable | 4k37B-5n2gA:undetectable | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5tj6 | HIGH CONDUCTANCECALCIUM-ACTIVATEDPOTASSIUM CHANNEL (Aplysiacalifornica) |
PF00520(Ion_trans)PF03493(BK_channel_a) | 5 | ASN A 794ARG A 720LEU A 798ILE A 800LEU A 782 | None | 1.48A | 4k37B-5tj6A:undetectable | 4k37B-5tj6A:16.14 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5u22 | N2152 (Neocallimastixfrontalis) |
PF01229(Glyco_hydro_39) | 5 | ASN A 333SER A 334ARG A 275LEU A 336ILE A 337 | None | 1.35A | 4k37B-5u22A:2.6 | 4k37B-5u22A:22.49 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5vsl | RADICAL S-ADENOSYLMETHIONINEDOMAIN-CONTAININGPROTEIN 2 (Mus musculus) |
PF04055(Radical_SAM)PF13353(Fer4_12) | 5 | GLU A 127ASN A 158SER A 180VAL A 224LEU A 252 | SAH A 402 (-4.3A)SF4 A 401 ( 4.3A)SAH A 402 (-2.4A)SAH A 402 (-4.3A)SAH A 402 (-4.5A) | 0.41A | 4k37B-5vslA:19.4 | 4k37B-5vslA:23.48 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5wgg | RADICAL SAM DOMAINPROTEIN (Ruminiclostridiumthermocellum) |
PF04055(Radical_SAM)PF13186(SPASM)PF13353(Fer4_12) | 5 | TYR A 110GLU A 155ASN A 188SER A 210ARG A 222 | SAM A 504 (-4.8A)SAM A 504 (-3.7A)SF4 A 502 ( 4.3A)SAM A 504 (-2.5A)SF4 A 502 ( 3.6A) | 0.19A | 4k37B-5wggA:30.9 | 4k37B-5wggA:23.12 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5xyu | 30S RIBOSOMALPROTEIN S7 (Mycolicibacteriumsmegmatis) |
PF00177(Ribosomal_S7) | 5 | ASN G 106SER G 108LEU G 120ILE G 42LEU G 38 | C A 922 ( 4.9A)NoneNone U A1221 ( 3.6A) G A1222 ( 4.1A) | 1.24A | 4k37B-5xyuG:undetectable | 4k37B-5xyuG:18.23 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6f85 | CYTOCHROME P450CYP260A1 (Sorangiumcellulosum) |
no annotation | 5 | GLU A 101SER A 109LEU A 132VAL A 113LEU A 364 | None | 1.40A | 4k37B-6f85A:undetectable | 4k37B-6f85A:undetectable |