SIMILAR PATTERNS OF AMINO ACIDS FOR 3U88_A_CHDA611

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1c2o ACETYLCHOLINESTERASE

(Electrophorus
electricus) 		PF00135
(COesterase) 		3 SER A 512
PHE A 430
LYS A 332
 None
 1.00A 3u88A-1c2oA:
0.0		 3u88A-1c2oA:
23.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1crz TOLB PROTEIN

(Escherichia
coli) 		PF04052
(TolB_N)
PF07676
(PD40) 		3 SER A 320
PHE A 324
LYS A 323
 None
 0.83A 3u88A-1crzA:
0.0		 3u88A-1crzA:
22.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1dmw PHENYLALANINE
HYDROXYLASE

(Homo sapiens) 		PF00351
(Biopterin_H) 		3 SER A 303
PHE A 392
LYS A 396
 None
 1.00A 3u88A-1dmwA:
0.0		 3u88A-1dmwA:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1eu8 TREHALOSE/MALTOSE
BINDING PROTEIN

(Thermococcus
litoralis) 		PF01547
(SBP_bac_1) 		3 SER A 318
PHE A 325
LYS A 323
 None
None
CL  A 413 (-3.4A)
 1.02A 3u88A-1eu8A:
0.0		 3u88A-1eu8A:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1gxh COLICIN E8 IMMUNITY
PROTEIN

(Escherichia
coli) 		PF01320
(Colicin_Pyocin) 		3 SER A  80
PHE A  82
LYS A  83
 None
 1.01A 3u88A-1gxhA:
undetectable		 3u88A-1gxhA:
8.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1hz3 A-BETA AMYLOID

(Homo sapiens) 		PF03494
(Beta-APP) 		3 SER A  17
PHE A  10
LYS A  19
 None
 0.89A 3u88A-1hz3A:
undetectable		 3u88A-1hz3A:
4.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ifv PROTEIN LLR18B

(Lupinus luteus) 		PF00407
(Bet_v_1) 		3 SER A 105
PHE A  78
LYS A 102
 None
 0.91A 3u88A-1ifvA:
undetectable		 3u88A-1ifvA:
16.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1k1d D-HYDANTOINASE

(Geobacillus
stearothermophilus) 		PF01979
(Amidohydro_1) 		3 SER A 127
PHE A 159
LYS A 151
 None
None
KCX  A 150 ( 3.7A)
 0.86A 3u88A-1k1dA:
undetectable		 3u88A-1k1dA:
23.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ng0 COAT PROTEIN

(Cocksfoot
mottle virus) 		PF00729
(Viral_coat) 		3 SER A 246
PHE A  64
LYS A 244
 SER  A 246 ( 0.0A)
PHE  A  64 ( 1.3A)
LYS  A 244 ( 0.0A)
 1.02A 3u88A-1ng0A:
undetectable		 3u88A-1ng0A:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1phz PROTEIN
(PHENYLALANINE
HYDROXYLASE)

(Rattus
norvegicus) 		PF00351
(Biopterin_H)
PF01842
(ACT) 		3 SER A 303
PHE A 392
LYS A 396
 None
 0.94A 3u88A-1phzA:
undetectable		 3u88A-1phzA:
22.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1q5a EP-CADHERIN

(Mus musculus) 		PF00028
(Cadherin) 		3 SER A  82
PHE A  31
LYS A  28
 None
 0.92A 3u88A-1q5aA:
undetectable		 3u88A-1q5aA:
20.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1s68 RNA LIGASE 2

(Escherichia
virus T4) 		PF09414
(RNA_ligase) 		3 SER A 140
PHE A 145
LYS A 146
 None
 0.56A 3u88A-1s68A:
undetectable		 3u88A-1s68A:
19.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1sr4 CYTOLETHAL
DISTENDING TOXIN
PROTEIN B

([Haemophilus]
ducreyi) 		PF03372
(Exo_endo_phos) 		3 SER B  25
PHE B  27
LYS B  28
 None
 0.80A 3u88A-1sr4B:
undetectable		 3u88A-1sr4B:
19.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ttu LIN-12 AND GLP-1
TRANSCRIPTIONAL
REGULATOR

(Caenorhabditis
elegans) 		PF01833
(TIG)
PF09270
(BTD)
PF09271
(LAG1-DNAbind) 		3 SER A 605
PHE A 586
LYS A 587
 None
 0.84A 3u88A-1ttuA:
undetectable		 3u88A-1ttuA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1v74 COLICIN D IMMUNITY
PROTEIN

(Escherichia
coli) 		PF09204
(Colicin_immun) 		3 SER B  80
PHE B  85
LYS B  86
 None
 0.80A 3u88A-1v74B:
undetectable		 3u88A-1v74B:
10.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1vbg PYRUVATE,ORTHOPHOSPH
ATE DIKINASE

(Zea mays) 		PF00391
(PEP-utilizers)
PF01326
(PPDK_N)
PF02896
(PEP-utilizers_C) 		3 SER A 154
PHE A 156
LYS A 159
 None
 0.98A 3u88A-1vbgA:
undetectable		 3u88A-1vbgA:
21.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1w99 PESTICIDIAL CRYSTAL
PROTEIN CRY4BA

(Bacillus
thuringiensis) 		PF00555
(Endotoxin_M)
PF03944
(Endotoxin_C)
PF03945
(Endotoxin_N) 		3 SER A 446
PHE A 345
LYS A 322
 None
 0.94A 3u88A-1w99A:
2.2		 3u88A-1w99A:
22.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1x5m CALCYCLIN-BINDING
PROTEIN

(Homo sapiens) 		PF04969
(CS) 		3 SER A  87
PHE A  31
LYS A  33
 None
 0.91A 3u88A-1x5mA:
undetectable		 3u88A-1x5mA:
14.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1x9r UMECYANIN

(Armoracia
rusticana) 		PF02298
(Cu_bind_like) 		3 SER A  15
PHE A  19
LYS A  18
 None
 0.91A 3u88A-1x9rA:
undetectable		 3u88A-1x9rA:
11.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1yb5 QUINONE
OXIDOREDUCTASE

(Homo sapiens) 		PF00107
(ADH_zinc_N)
PF08240
(ADH_N) 		3 SER A  85
PHE A  87
LYS A  88
 GOL  A 815 (-4.0A)
None
None
 0.69A 3u88A-1yb5A:
undetectable		 3u88A-1yb5A:
21.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1yiq QUINOHEMOPROTEIN
ALCOHOL
DEHYDROGENASE

(Pseudomonas
putida) 		PF01011
(PQQ)
PF13360
(PQQ_2)
PF13442
(Cytochrome_CBB3) 		3 SER A 343
PHE A 331
LYS A 345
 None
 0.98A 3u88A-1yiqA:
undetectable		 3u88A-1yiqA:
21.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zc1 UBIQUITIN FUSION
DEGRADATION PROTEIN
1

(Saccharomyces
cerevisiae) 		PF03152
(UFD1) 		3 SER A 163
PHE A 169
LYS A 170
 None
 0.88A 3u88A-1zc1A:
undetectable		 3u88A-1zc1A:
16.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2aeu HYPOTHETICAL PROTEIN
MJ0158

(Methanocaldococcus
jannaschii) 		PF03841
(SelA) 		3 SER A  57
PHE A  59
LYS A  62
 None
 0.97A 3u88A-2aeuA:
undetectable		 3u88A-2aeuA:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2aj2 HYPOTHETICAL UPF0301
PROTEIN VC0467

(Vibrio cholerae) 		PF02622
(DUF179) 		3 SER A 159
PHE A  32
LYS A  33
 None
 0.82A 3u88A-2aj2A:
undetectable		 3u88A-2aj2A:
16.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bh1 GENERAL SECRETION
PATHWAY PROTEIN E,

(Vibrio cholerae) 		no annotation 3 SER X  20
PHE X  25
LYS X  26
 None
 0.75A 3u88A-2bh1X:
undetectable		 3u88A-2bh1X:
11.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2cge ATP-DEPENDENT
MOLECULAR CHAPERONE
HSP82

(Saccharomyces
cerevisiae) 		PF00183
(HSP90) 		3 SER A 419
PHE A 421
LYS A 423
 None
 0.93A 3u88A-2cgeA:
undetectable		 3u88A-2cgeA:
21.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2dkj SERINE
HYDROXYMETHYLTRANSFE
RASE

(Thermus
thermophilus) 		PF00464
(SHMT) 		3 SER A 127
PHE A 131
LYS A 134
 None
 0.99A 3u88A-2dkjA:
undetectable		 3u88A-2dkjA:
22.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2dq3 SERYL-TRNA
SYNTHETASE

(Aquifex
aeolicus) 		PF00587
(tRNA-synt_2b)
PF02403
(Seryl_tRNA_N) 		3 SER A 343
PHE A 341
LYS A 346
 None
 0.84A 3u88A-2dq3A:
undetectable		 3u88A-2dq3A:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2gdt LEADER PROTEIN
P65 HOMOLOG
NSP1 (EC 3.4.22.-)

(Severe acute
respiratory
syndrome-related
coronavirus) 		PF11501
(Nsp1) 		3 SER A  89
PHE A  59
LYS A  61
 None
 0.84A 3u88A-2gdtA:
undetectable		 3u88A-2gdtA:
13.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2gli PROTEIN (FIVE-FINGER
GLI)

(Homo sapiens) 		PF00096
(zf-C2H2) 		3 SER A 117
PHE A 115
LYS A 103
 None
 1.01A 3u88A-2gliA:
undetectable		 3u88A-2gliA:
12.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hjq HYPOTHETICAL PROTEIN
YQBF

(Bacillus
subtilis) 		PF14553
(YqbF) 		3 SER A  82
PHE A  84
LYS A  85
 None
 0.97A 3u88A-2hjqA:
undetectable		 3u88A-2hjqA:
10.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hvq HYPOTHETICAL 37.6
KDA PROTEIN IN
GP24-HOC INTERGENIC
REGION

(Escherichia
virus T4) 		PF09414
(RNA_ligase) 		3 SER A 140
PHE A 145
LYS A 146
 None
 0.97A 3u88A-2hvqA:
undetectable		 3u88A-2hvqA:
20.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2icy PROBABLE
UTP-GLUCOSE-1-PHOSPH
ATE
URIDYLYLTRANSFERASE
2

(Arabidopsis
thaliana) 		PF01704
(UDPGP) 		3 SER A 285
PHE A 289
LYS A 290
 None
 0.95A 3u88A-2icyA:
undetectable		 3u88A-2icyA:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2icy PROBABLE
UTP-GLUCOSE-1-PHOSPH
ATE
URIDYLYLTRANSFERASE
2

(Arabidopsis
thaliana) 		PF01704
(UDPGP) 		3 SER A 408
PHE A 410
LYS A 411
 None
 0.97A 3u88A-2icyA:
undetectable		 3u88A-2icyA:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2it9 HYPOTHETICAL PROTEIN

(Prochlorococcus
marinus) 		PF08848
(DUF1818) 		3 SER A  21
PHE A  13
LYS A   0
 None
 0.99A 3u88A-2it9A:
undetectable		 3u88A-2it9A:
11.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2j2m CATALASE

(Exiguobacterium
oxidotolerans) 		PF00199
(Catalase)
PF06628
(Catalase-rel) 		3 SER A 114
PHE A  91
LYS A 116
 HEM  A 501 (-3.3A)
None
None
 0.99A 3u88A-2j2mA:
undetectable		 3u88A-2j2mA:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2jik SYNAPTOJANIN-2
BINDING PROTEIN

(Homo sapiens) 		PF00595
(PDZ) 		3 SER A  45
PHE A  25
LYS A  48
 None
 0.97A 3u88A-2jikA:
undetectable		 3u88A-2jikA:
10.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2khj 30S RIBOSOMAL
PROTEIN S1

(Escherichia
coli) 		PF00575
(S1) 		3 SER A  77
PHE A  66
LYS A  65
 None
 0.80A 3u88A-2khjA:
undetectable		 3u88A-2khjA:
10.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2lhi CALMODULIN,
SERINE/THREONINE-PRO
TEIN PHOSPHATASE 2B
CATALYTIC SUBUNIT A1

(Saccharomyces
cerevisiae;
synthetic
construct) 		PF13499
(EF-hand_7) 		3 SER A  66
PHE A  12
LYS A  13
 None
 1.00A 3u88A-2lhiA:
undetectable		 3u88A-2lhiA:
15.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2nn6 EXOSOME COMPLEX
EXONUCLEASE RRP43
EXOSOME COMPONENT 6

(Homo sapiens;
Homo sapiens) 		PF01138
(RNase_PH)
PF03725
(RNase_PH_C)
PF01138
(RNase_PH) 		3 SER C  48
PHE F 105
LYS C  63
 None
 0.70A 3u88A-2nn6C:
undetectable		 3u88A-2nn6C:
20.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2oaa R.MVAI

(Kocuria varians) 		PF15515
(MvaI_BcnI) 		3 SER A 111
PHE A 118
LYS A 108
 None
 0.97A 3u88A-2oaaA:
undetectable		 3u88A-2oaaA:
16.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ppq HOMOSERINE KINASE

(Agrobacterium
fabrum) 		PF01636
(APH) 		3 SER A 269
PHE A 307
LYS A 304
 None
 0.76A 3u88A-2ppqA:
undetectable		 3u88A-2ppqA:
21.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2toh TYROSINE
3-MONOOXYGENASE

(Rattus
norvegicus) 		PF00351
(Biopterin_H) 		3 SER A 349
PHE A 438
LYS A 442
 None
 0.96A 3u88A-2tohA:
undetectable		 3u88A-2tohA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xhf PEROXIREDOXIN 5

(Alvinella
pompejana) 		PF08534
(Redoxin) 		3 SER A  91
PHE A  96
LYS A  95
 None
 1.00A 3u88A-2xhfA:
undetectable		 3u88A-2xhfA:
14.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2y0s RNA POLYMERASE
SUBUNIT 8

(Sulfolobus
shibatae) 		PF16992
(RNA_pol_RpbG) 		3 SER G  60
PHE G  58
LYS G 114
 None
 0.94A 3u88A-2y0sG:
undetectable		 3u88A-2y0sG:
11.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3a1f CYTOCHROME B-245
HEAVY CHAIN

(Homo sapiens) 		PF08030
(NAD_binding_6) 		3 SER A 170
PHE A 136
LYS A 137
 None
 0.99A 3u88A-3a1fA:
undetectable		 3u88A-3a1fA:
17.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3a31 PROBABLE
THREONYL-TRNA
SYNTHETASE 1

(Aeropyrum
pernix) 		PF00587
(tRNA-synt_2b)
PF03129
(HGTP_anticodon) 		3 SER A 212
PHE A 218
LYS A 216
 None
 0.95A 3u88A-3a31A:
undetectable		 3u88A-3a31A:
24.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3a9s D-ARABINOSE
ISOMERASE

(Aeribacillus
pallidus) 		PF02952
(Fucose_iso_C)
PF07881
(Fucose_iso_N1)
PF07882
(Fucose_iso_N2) 		3 SER A 441
PHE A 254
LYS A 255
 None
 0.69A 3u88A-3a9sA:
undetectable		 3u88A-3a9sA:
21.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3b43 TITIN

(Oryctolagus
cuniculus) 		PF07679
(I-set) 		3 SER A 278
PHE A 196
LYS A 199
 None
 0.99A 3u88A-3b43A:
undetectable		 3u88A-3b43A:
23.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3c9f 5'-NUCLEOTIDASE

(Candida
albicans) 		PF00149
(Metallophos) 		3 SER A  57
PHE A 306
LYS A 307
 None
 0.93A 3u88A-3c9fA:
undetectable		 3u88A-3c9fA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3evy PUTATIVE TYPE I
RESTRICTION ENZYME R
PROTEIN

(Bacteroides
fragilis) 		PF12008
(EcoR124_C) 		3 SER A 744
PHE A 701
LYS A 698
 None
 0.98A 3u88A-3evyA:
undetectable		 3u88A-3evyA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gwq D-SERINE DEAMINASE

(Paraburkholderia
xenovorans) 		PF01168
(Ala_racemase_N)
PF14031
(D-ser_dehydrat) 		3 SER A 161
PHE A 159
LYS A 164
 None
 0.92A 3u88A-3gwqA:
undetectable		 3u88A-3gwqA:
24.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ixw HEMOCYANIN AA6 CHAIN

(Androctonus
australis) 		PF00372
(Hemocyanin_M)
PF03722
(Hemocyanin_N)
PF03723
(Hemocyanin_C) 		3 SER A 545
PHE A 551
LYS A 621
 None
 1.02A 3u88A-3ixwA:
undetectable		 3u88A-3ixwA:
22.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mn8 LP15968P

(Drosophila
melanogaster) 		PF00246
(Peptidase_M14)
PF13620
(CarboxypepD_reg) 		3 SER A 224
PHE A 248
LYS A 249
 GEM  A 601 ( 4.2A)
None
None
 0.82A 3u88A-3mn8A:
undetectable		 3u88A-3mn8A:
21.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nbh RECQ-MEDIATED GENOME
INSTABILITY PROTEIN
1

(Homo sapiens) 		PF16099
(RMI1_C) 		3 SER A 488
PHE A 491
LYS A 509
 None
 0.78A 3u88A-3nbhA:
undetectable		 3u88A-3nbhA:
15.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nx3 ACETYLORNITHINE
AMINOTRANSFERASE

(Campylobacter
jejuni) 		PF00202
(Aminotran_3) 		3 SER A 159
PHE A 127
LYS A 162
 None
 1.00A 3u88A-3nx3A:
undetectable		 3u88A-3nx3A:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3tgq HIV-1 YU2 GP120

(Human
immunodeficiency
virus 1) 		PF00516
(GP120) 		3 SER A 375
PHE A 382
LYS A 421
 None
 0.95A 3u88A-3tgqA:
undetectable		 3u88A-3tgqA:
19.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3tha TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Campylobacter
jejuni) 		PF00290
(Trp_syntA) 		3 SER A  99
PHE A 105
LYS A 104
 None
 0.81A 3u88A-3thaA:
undetectable		 3u88A-3thaA:
18.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3tih HIV-1 CLADE C
ZM109F.PB4 GP120

(Human
immunodeficiency
virus 1) 		PF00516
(GP120) 		3 SER A 375
PHE A 382
LYS A 421
 None
 0.89A 3u88A-3tihA:
undetectable		 3u88A-3tihA:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3v34 RIBONUCLEASE ZC3H12A

(Homo sapiens) 		PF11977
(RNase_Zc3h12a) 		3 SER A 268
PHE A 274
LYS A 273
 None
 0.92A 3u88A-3v34A:
undetectable		 3u88A-3v34A:
15.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wsy SORTILIN-RELATED
RECEPTOR

(Homo sapiens) 		PF15901
(Sortilin_C)
PF15902
(Sortilin-Vps10) 		3 SER A 216
PHE A 191
LYS A 175
 None
 0.96A 3u88A-3wsyA:
undetectable		 3u88A-3wsyA:
21.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3zyt ESTERASE A

(Paenarthrobacter
nitroguajacolicus) 		PF00144
(Beta-lactamase) 		3 SER A 316
PHE A 320
LYS A 307
 None
 0.92A 3u88A-3zytA:
undetectable		 3u88A-3zytA:
22.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4asm BETA-AGARASE D

(Zobellia
galactanivorans) 		no annotation 3 SER B 172
PHE B 174
LYS B 177
 None
 0.85A 3u88A-4asmB:
undetectable		 3u88A-4asmB:
18.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bed HEMOCYANIN KLH1

(Megathura
crenulata) 		PF00264
(Tyrosinase)
PF14830
(Haemocyan_bet_s) 		3 SER A 888
PHE A 891
LYS A 880
 None
 0.87A 3u88A-4bedA:
undetectable		 3u88A-4bedA:
15.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4e6w CLBP PEPTIDASE

(Escherichia
coli) 		PF00144
(Beta-lactamase) 		3 SER A 148
PHE A 184
LYS A 183
 None
PO4  A 401 (-3.6A)
None
 0.80A 3u88A-4e6wA:
undetectable		 3u88A-4e6wA:
20.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ejs ELONGATOR COMPLEX
PROTEIN 5
ELONGATOR COMPLEX
PROTEIN 6

(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae) 		PF10483
(Elong_Iki1)
no annotation 		3 SER B  30
PHE C 212
LYS C 209
 None
 0.89A 3u88A-4ejsB:
undetectable		 3u88A-4ejsB:
17.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4h05 AMINOGLYCOSIDE-O-PHO
SPHOTRANSFERASE VIII

(Streptomyces
rimosus) 		PF01636
(APH) 		3 SER A 215
PHE A 259
LYS A 256
 None
 0.83A 3u88A-4h05A:
undetectable		 3u88A-4h05A:
19.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4h3s GLUTAMINE-TRNA
LIGASE

(Saccharomyces
cerevisiae) 		PF00749
(tRNA-synt_1c)
PF03950
(tRNA-synt_1c_C)
PF04557
(tRNA_synt_1c_R2) 		3 SER A 730
PHE A 710
LYS A 711
 CL  A 911 (-3.5A)
None
None
 0.66A 3u88A-4h3sA:
undetectable		 3u88A-4h3sA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lz6 BH2163 PROTEIN

(Bacillus
halodurans) 		PF01554
(MatE) 		3 SER A 225
PHE A 217
LYS A 221
 None
 1.00A 3u88A-4lz6A:
1.7		 3u88A-4lz6A:
22.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4o6z SERINE
HYDROXYMETHYLTRANSFE
RASE

(Plasmodium
falciparum) 		PF00464
(SHMT) 		3 SER A 150
PHE A 148
LYS A 116
 None
 0.98A 3u88A-4o6zA:
undetectable		 3u88A-4o6zA:
21.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4pht GENERAL SECRETORY
PATHWAY PROTEIN E

(Vibrio
vulnificus) 		PF00437
(T2SSE) 		3 SER A  17
PHE A  22
LYS A  23
 None
 0.89A 3u88A-4phtA:
undetectable		 3u88A-4phtA:
22.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qhx UNCHARACTERIZED
PROTEIN

(Bacteroides
caccae) 		PF11958
(DUF3472)
PF16871
(DUF5077) 		3 SER A 255
PHE A 222
LYS A 235
 None
 0.87A 3u88A-4qhxA:
undetectable		 3u88A-4qhxA:
23.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4r4h HIV-1 ENV GP120

(Human
immunodeficiency
virus 1) 		PF00516
(GP120) 		3 SER A 374
PHE A 381
LYS A 420
 None
 0.99A 3u88A-4r4hA:
undetectable		 3u88A-4r4hA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4r7p UTP--GLUCOSE-1-PHOSP
HATE
URIDYLYLTRANSFERASE

(Homo sapiens) 		PF01704
(UDPGP) 		3 SER A 320
PHE A 324
LYS A 325
 None
 0.83A 3u88A-4r7pA:
undetectable		 3u88A-4r7pA:
22.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rk2 PUTATIVE SUGAR ABC
TRANSPORTER,
SUBSTRATE-BINDING
PROTEIN

(Rhizobium etli) 		PF01547
(SBP_bac_1) 		3 SER A 280
PHE A 257
LYS A 284
 None
 0.89A 3u88A-4rk2A:
undetectable		 3u88A-4rk2A:
21.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rx4 HIV-1 CLADE A
Q842.D12 GP120

(Human
immunodeficiency
virus 1) 		no annotation 3 SER G 375
PHE G 382
LYS G 421
 None
None
SO4  G 511 (-4.3A)
 0.95A 3u88A-4rx4G:
undetectable		 3u88A-4rx4G:
17.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4usq PYRIDINE
NUCLEOTIDE-DISULFIDE
OXIDOREDUCTASE

(Cellvibrio sp.
BR) 		PF13738
(Pyr_redox_3) 		3 SER A 183
PHE A  62
LYS A 243
 FAD  A1361 (-3.2A)
FAD  A1361 (-3.3A)
None
 0.95A 3u88A-4usqA:
undetectable		 3u88A-4usqA:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ydf HTLV-1 PROTEASE

(Primate
T-lymphotropic
virus 1) 		PF00077
(RVP) 		3 SER A  55
PHE A  67
LYS A  68
 None
 0.89A 3u88A-4ydfA:
undetectable		 3u88A-4ydfA:
13.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ye4 HT593.1 GP120

(Human
immunodeficiency
virus) 		PF00516
(GP120) 		3 SER G 375
PHE G 382
LYS G 421
 None
 0.97A 3u88A-4ye4G:
undetectable		 3u88A-4ye4G:
20.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4yyc PUTATIVE
TRIMETHYLAMINE
METHYLTRANSFERASE

(Sinorhizobium
meliloti) 		PF06253
(MTTB) 		3 SER A 401
PHE A 406
LYS A 405
 None
 0.55A 3u88A-4yycA:
undetectable		 3u88A-4yycA:
22.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5aek SENTRIN-SPECIFIC
PROTEASE 2

(Homo sapiens) 		PF02902
(Peptidase_C48) 		3 SER A 390
PHE A 393
LYS A 394
 None
 0.96A 3u88A-5aekA:
undetectable		 3u88A-5aekA:
16.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5amw FRA A 2 ALLERGEN

(Fragaria x
ananassa) 		PF00407
(Bet_v_1) 		3 SER A 107
PHE A  80
LYS A 104
 None
 0.91A 3u88A-5amwA:
undetectable		 3u88A-5amwA:
14.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5dkx ALPHA
GLUCOSIDASE-LIKE
PROTEIN

(Chaetomium
thermophilum) 		PF01055
(Glyco_hydro_31)
PF13802
(Gal_mutarotas_2)
PF17137
(DUF5110) 		3 SER A 170
PHE A 173
LYS A 166
 None
 0.99A 3u88A-5dkxA:
undetectable		 3u88A-5dkxA:
20.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5epg ALDEHYDE OXIDASE

(Homo sapiens) 		PF00111
(Fer2)
PF00941
(FAD_binding_5)
PF01315
(Ald_Xan_dh_C)
PF01799
(Fer2_2)
PF02738
(Ald_Xan_dh_C2)
PF03450
(CO_deh_flav_C) 		3 SER A 383
PHE A 257
LYS A 256
 None
 0.80A 3u88A-5epgA:
undetectable		 3u88A-5epgA:
17.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5f4l ENVELOPE
GLYCOPROTEIN GP120
OF HIV-1 CLADE C

(Human
immunodeficiency
virus 1) 		PF00516
(GP120) 		3 SER A 375
PHE A 382
LYS A 421
 5VE  A 501 (-2.8A)
5VE  A 501 ( 4.8A)
None
 0.78A 3u88A-5f4lA:
undetectable		 3u88A-5f4lA:
20.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fuu HIV-1 ENVELOPE
GLYCOPROTEIN GP160

(Human
immunodeficiency
virus 1) 		PF00516
(GP120) 		3 SER A 375
PHE A 382
LYS A 421
 None
 1.00A 3u88A-5fuuA:
undetectable		 3u88A-5fuuA:
22.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5g2x GROUP II
INTRON-ENCODED
PROTEIN LTRA

(Lactococcus
lactis) 		PF00078
(RVT_1)
PF01348
(Intron_maturas2) 		3 SER C 480
PHE C 482
LYS C 483
 None
C  A 153 ( 3.7A)
None
 0.44A 3u88A-5g2xC:
0.0		 3u88A-5g2xC:
19.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gvs PROBABLE
ATP-DEPENDENT RNA
HELICASE DDX41

(Homo sapiens) 		PF00270
(DEAD) 		3 SER A 363
PHE A 365
LYS A 366
 None
 0.90A 3u88A-5gvsA:
undetectable		 3u88A-5gvsA:
17.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gyl LEGUMIN-LIKE PROTEIN

(Cicer arietinum) 		PF00190
(Cupin_1) 		3 SER A 211
PHE A 213
LYS A 214
 None
 0.90A 3u88A-5gylA:
undetectable		 3u88A-5gylA:
21.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5h1y PROBABLE
ATP-DEPENDENT RNA
HELICASE DDX41

(Homo sapiens) 		PF00270
(DEAD) 		3 SER A 363
PHE A 365
LYS A 366
 None
 0.82A 3u88A-5h1yA:
undetectable		 3u88A-5h1yA:
18.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5jh1 ALDOSE REDUCTASE,
AKR4C7

(Zea mays) 		PF00248
(Aldo_ket_red) 		3 SER A 157
PHE A 191
LYS A 187
 None
 0.77A 3u88A-5jh1A:
undetectable		 3u88A-5jh1A:
19.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5nck N-ACETYLMANNOSAMINE
KINASE

(Fusobacterium
nucleatum) 		PF00480
(ROK) 		3 SER A 220
PHE A 260
LYS A 261
 None
 0.94A 3u88A-5nckA:
undetectable		 3u88A-5nckA:
19.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5oy0 PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A2

(Synechocystis
sp. PCC 6803) 		no annotation 3 SER b   9
PHE b   5
LYS b   3
 None
 0.73A 3u88A-5oy0b:
0.0		 3u88A-5oy0b:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5te4 HIV-1 CLADE G STRAIN
X2088 GP120

(Human
immunodeficiency
virus 1) 		PF00516
(GP120) 		3 SER G 375
PHE G 382
LYS G 421
 BU3  G 515 (-3.2A)
None
SO4  G 512 (-2.8A)
 1.00A 3u88A-5te4G:
undetectable		 3u88A-5te4G:
19.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5um8 GLYCOPROTEIN GP120

(Human
immunodeficiency
virus 1) 		PF00516
(GP120) 		3 SER G 375
PHE G 382
LYS G 421
 None
 0.81A 3u88A-5um8G:
undetectable		 3u88A-5um8G:
19.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5v8f DNA REPLICATION
LICENSING FACTOR
MCM7

(Saccharomyces
cerevisiae) 		PF00493
(MCM)
PF14551
(MCM_N)
PF17207
(MCM_OB) 		3 SER 7 249
PHE 7 310
LYS 7 252
 None
 0.98A 3u88A-5v8f7:
undetectable		 3u88A-5v8f7:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5w94 MAU2 CHROMATID
COHESION FACTOR
HOMOLOG

(Saccharomyces
cerevisiae) 		PF10345
(Cohesin_load) 		3 SER A 312
PHE A 324
LYS A 321
 None
 0.85A 3u88A-5w94A:
2.7		 3u88A-5w94A:
21.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5weg UTP--GLUCOSE-1-PHOSP
HATE
URIDYLYLTRANSFERASE

(Saccharum
hybrid cultivar) 		no annotation 3 SER A 292
PHE A 296
LYS A 297
 None
 0.74A 3u88A-5wegA:
undetectable		 3u88A-5wegA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ck9 GP120 OF ENVELOPE
GLYCOPROTEIN GP160

(Human
immunodeficiency
virus 1) 		no annotation 3 SER G 375
PHE G 382
LYS G 421
 None
 0.98A 3u88A-6ck9G:
undetectable		 3u88A-6ck9G:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6g2j NADH-UBIQUINONE
OXIDOREDUCTASE CHAIN
4

(Mus musculus) 		no annotation 3 SER M 157
PHE M 203
LYS M 206
 None
 0.93A 3u88A-6g2jM:
undetectable		 3u88A-6g2jM:
undetectable