SIMILAR PATTERNS OF AMINO ACIDS FOR 3SAN_B_ZMRB901_2

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ile ISOLEUCYL-TRNA
SYNTHETASE

(Thermus
thermophilus) 		PF00133
(tRNA-synt_1)
PF08264
(Anticodon_1) 		4 ASP A 496
ARG A 510
ARG A 509
TRP A 459
 None
 1.48A 3sanB-1ileA:
undetectable		 3sanB-1ileA:
17.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1m7h ADENYLYLSULFATE
KINASE

(Penicillium
chrysogenum) 		PF01583
(APS_kinase) 		4 ASP A 112
ARG A 113
TRP A  29
ILE A  87
 None
 1.49A 3sanB-1m7hA:
undetectable		 3sanB-1m7hA:
18.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1nmb N9 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP N 151
ARG N 152
ARG N 156
TRP N 178
ILE N 222
 None
 0.68A 3sanB-1nmbN:
63.4		 3sanB-1nmbN:
36.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1v0z NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 157
ARG A 158
ARG A 162
TRP A 185
ILE A 229
 None
 0.23A 3sanB-1v0zA:
64.7		 3sanB-1v0zA:
45.84
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1vcj NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		5 ASP A 149
ARG A 150
ARG A 154
TRP A 177
ILE A 221
 IBA  A   1 (-3.6A)
IBA  A   1 (-3.9A)
IBA  A   1 (-4.1A)
None
IBA  A   1 ( 4.3A)
 0.58A 3sanB-1vcjA:
53.6		 3sanB-1vcjA:
36.34
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1xog NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 152
ARG A 153
ARG A 157
TRP A 180
ILE A 224
 ABW  A1000 (-3.7A)
ABW  A1000 (-4.1A)
ABW  A1000 (-4.2A)
None
ABW  A1000 ( 4.7A)
 0.45A 3sanB-1xogA:
64.1		 3sanB-1xogA:
43.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2fhx SPM-1

(Pseudomonas
aeruginosa) 		PF00753
(Lactamase_B) 		4 ASP B 244
ARG B 247
ARG B 248
ILE B 304
 None
 1.30A 3sanB-2fhxB:
undetectable		 3sanB-2fhxB:
18.45
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2htv NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		4 ARG A 152
ARG A 156
TRP A 178
ILE A 222
 None
 0.39A 3sanB-2htvA:
68.1		 3sanB-2htvA:
57.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2htv NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		4 ASP A 151
ARG A 152
TRP A 178
ILE A 222
 None
 0.79A 3sanB-2htvA:
68.1		 3sanB-2htvA:
57.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hy5 PUTATIVE
SULFURTRANSFERASE
DSRE

(Allochromatium
vinosum) 		PF02635
(DrsE) 		4 ASP A  18
ARG A  63
TRP A  64
ILE A   7
 None
 1.46A 3sanB-2hy5A:
undetectable		 3sanB-2hy5A:
16.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2o0r RV0858C
(N-SUCCINYLDIAMINOPI
MELATE
AMINOTRANSFERASE)

(Mycobacterium
tuberculosis) 		PF00155
(Aminotran_1_2) 		4 ASP A 150
ARG A 153
ARG A 154
ILE A 187
 None
 1.37A 3sanB-2o0rA:
undetectable		 3sanB-2o0rA:
20.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2p1r LIPID KINASE YEGS

(Salmonella
enterica) 		PF00781
(DAGK_cat) 		4 ASP A  51
ARG A  54
ARG A  55
ILE A  80
 None
 1.48A 3sanB-2p1rA:
undetectable		 3sanB-2p1rA:
22.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2php UNCHARACTERIZED
PROTEIN MJ0236

(Methanocaldococcus
jannaschii) 		PF10120
(ThiP_synth) 		4 ASP A 402
ARG A 330
ARG A 401
ILE A 242
 None
 1.40A 3sanB-2phpA:
undetectable		 3sanB-2phpA:
16.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2q1f CHONDROITINASE

(Bacteroides
thetaiotaomicron) 		PF02278
(Lyase_8)
PF09092
(Lyase_N)
PF09093
(Lyase_catalyt) 		4 ASP A 177
ARG A 126
TRP A 340
ILE A 343
 None
 1.49A 3sanB-2q1fA:
undetectable		 3sanB-2q1fA:
17.92
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ckz NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
 ZMR  A 469 (-3.5A)
ZMR  A 469 (-3.9A)
ZMR  A 469 (-3.4A)
None
None
 0.65A 3sanB-3ckzA:
69.8		 3sanB-3ckzA:
57.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hft WBMS, POLYSACCHARIDE
DEACETYLASE INVOLVED
IN O-ANTIGEN
BIOSYNTHESIS

(Bordetella
bronchiseptica) 		no annotation 4 ASP A 146
ARG A 171
TRP A 162
ILE A 149
 None
 1.28A 3sanB-3hftA:
undetectable		 3sanB-3hftA:
20.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nt8 ANCYLOSTOMA SECRETED
PROTEIN 1

(Necator
americanus) 		PF00188
(CAP) 		4 ASP A  34
ARG A  37
TRP A  74
ILE A  32
 None
 1.35A 3sanB-3nt8A:
undetectable		 3sanB-3nt8A:
22.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3rs1 C-TYPE LECTIN DOMAIN
FAMILY 2 MEMBER I

(Mus musculus) 		PF00059
(Lectin_C) 		4 ASP A 147
ARG A 198
TRP A 149
ILE A 196
 CL  A 301 (-4.9A)
None
None
None
 1.45A 3sanB-3rs1A:
undetectable		 3sanB-3rs1A:
18.01
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ti8 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
 LNV  A 901 (-3.4A)
LNV  A 901 (-4.0A)
LNV  A 901 (-4.0A)
None
None
 0.03A 3sanB-3ti8A:
79.3		 3sanB-3ti8A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3tia NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
 LNV  A 801 (-3.4A)
LNV  A 801 (-3.9A)
LNV  A 801 (-4.0A)
None
None
 0.09A 3sanB-3tiaA:
65.0		 3sanB-3tiaA:
39.37
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4b7j NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		4 ASP A 151
ARG A 152
ARG A 156
TRP A 179
 G39  A1470 (-3.7A)
G39  A1470 (-3.9A)
None
None
 0.13A 3sanB-4b7jA:
69.7		 3sanB-4b7jA:
48.41
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4cpn NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		5 ASP A 148
ARG A 149
ARG A 153
TRP A 176
ILE A 220
 ZMR  A 700 (-3.3A)
ZMR  A 700 (-4.0A)
ZMR  A 700 (-4.2A)
None
None
 0.12A 3sanB-4cpnA:
54.1		 3sanB-4cpnA:
32.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fb5 PROBABLE
OXIDOREDUCTASE
PROTEIN

(Rhizobium etli) 		PF01408
(GFO_IDH_MocA)
PF02894
(GFO_IDH_MocA_C) 		4 ASP A  31
ARG A 329
ARG A 309
ILE A 332
 None
 1.40A 3sanB-4fb5A:
undetectable		 3sanB-4fb5A:
22.99
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4h53 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
 SLB  A 512 (-3.5A)
SLB  A 512 (-3.8A)
None
None
None
 0.12A 3sanB-4h53A:
65.2		 3sanB-4h53A:
45.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4hlz FAB C179 HEAVY CHAIN

(Mus musculus) 		PF07654
(C1-set)
PF07686
(V-set) 		4 ASP G  52
ARG G  71
ARG G  52
ILE G  51
 None
 1.42A 3sanB-4hlzG:
undetectable		 3sanB-4hlzG:
21.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4hzz NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
 G39  A 509 (-3.6A)
G39  A 509 (-3.9A)
None
None
G39  A 509 ( 4.1A)
 0.17A 3sanB-4hzzA:
64.2		 3sanB-4hzzA:
45.52
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4mju NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
 27S  A 501 (-3.2A)
27S  A 501 (-4.2A)
None
None
27S  A 501 ( 4.6A)
 0.82A 3sanB-4mjuA:
72.4		 3sanB-4mjuA:
69.80
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4qn3 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A  69
ARG A  70
ARG A  74
TRP A  97
ILE A 141
 None
 0.31A 3sanB-4qn3A:
64.2		 3sanB-4qn3A:
44.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5bpt MGC81278 PROTEIN

(Xenopus laevis) 		PF12894
(ANAPC4_WD40)
PF12896
(ANAPC4) 		4 ASP A  69
ARG A  67
TRP A 108
ILE A  72
 None
 1.27A 3sanB-5bptA:
7.4		 3sanB-5bptA:
19.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5txw PEPTIDASE

(Thermococcus
thioreducens) 		PF01965
(DJ-1_PfpI) 		4 ASP A 125
ARG A 124
TRP A 134
ILE A 121
 None
 1.49A 3sanB-5txwA:
undetectable		 3sanB-5txwA:
16.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6br6 NEURAMINIDASE

(Influenza A
virus) 		no annotation 5 ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
 E3M  A 511 (-2.9A)
E3M  A 511 (-3.8A)
None
None
E3M  A 511 ( 4.3A)
 0.19A 3sanB-6br6A:
65.1		 3sanB-6br6A:
23.91