SIMILAR PATTERNS OF AMINO ACIDS FOR 3RAE_H_LFXH101

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1aog TRYPANOTHIONE
REDUCTASE


(Trypanosoma
cruzi)
PF02852
(Pyr_redox_dim)
PF07992
(Pyr_redox_2)
4 SER A 368
GLY A 230
GLU A 379
GLU A 380
None
1.30A 3raeB-1aogA:
undetectable
3raeD-1aogA:
undetectable
3raeB-1aogA:
22.43
3raeD-1aogA:
19.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1aso ASCORBATE OXIDASE

(Cucurbita pepo)
PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3)
4 SER A 442
GLY A 460
GLU A 467
GLU A 468
None
1.27A 3raeB-1asoA:
undetectable
3raeD-1asoA:
undetectable
3raeB-1asoA:
20.69
3raeD-1asoA:
20.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1bqc PROTEIN
(BETA-MANNANASE)


(Thermobifida
fusca)
PF00150
(Cellulase)
4 SER A 278
GLY A 253
GLU A 128
GLU A 225
None
1.49A 3raeB-1bqcA:
0.0
3raeD-1bqcA:
0.4
3raeB-1bqcA:
22.22
3raeD-1bqcA:
23.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1cjy PROTEIN (CYTOSOLIC
PHOSPHOLIPASE A2)


(Homo sapiens)
PF00168
(C2)
PF01735
(PLA2_B)
4 SER A 550
GLY A 355
GLU A 154
GLU A 353
None
1.33A 3raeB-1cjyA:
0.0
3raeD-1cjyA:
3.1
3raeB-1cjyA:
21.90
3raeD-1cjyA:
15.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1dqs PROTEIN
(3-DEHYDROQUINATE
SYNTHASE)


(Aspergillus
nidulans)
PF01761
(DHQ_synthase)
4 SER A 246
GLY A 288
GLU A  81
GLU A 278
None
None
NAD  A 400 (-2.8A)
NAD  A 400 ( 4.8A)
1.26A 3raeB-1dqsA:
0.0
3raeD-1dqsA:
2.2
3raeB-1dqsA:
25.83
3raeD-1dqsA:
20.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1leo NUCLEOSIDE
DIPHOSPHATE KINASE


(Dictyostelium
discoideum)
PF00334
(NDK)
4 SER A 103
GLY A 123
GLU A  58
GLU A 133
None
1.45A 3raeB-1leoA:
1.8
3raeD-1leoA:
undetectable
3raeB-1leoA:
14.91
3raeD-1leoA:
16.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1mhq ADP-RIBOSYLATION
FACTOR BINDING
PROTEIN GGA2


(Homo sapiens)
PF00790
(VHS)
4 SER A 121
GLY A 129
GLU A  87
GLU A 133
None
1.49A 3raeB-1mhqA:
0.0
3raeD-1mhqA:
undetectable
3raeB-1mhqA:
15.80
3raeD-1mhqA:
21.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ps9 2,4-DIENOYL-COA
REDUCTASE


(Escherichia
coli)
PF00724
(Oxidored_FMN)
PF07992
(Pyr_redox_2)
4 SER A 163
GLY A  57
GLU A  31
GLU A  30
None
FMN  A 702 ( 4.0A)
None
None
1.22A 3raeB-1ps9A:
0.0
3raeD-1ps9A:
1.2
3raeB-1ps9A:
21.72
3raeD-1ps9A:
16.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qlb FUMARATE REDUCTASE
FLAVOPROTEIN SUBUNIT
FUMARATE REDUCTASE
IRON-SULFUR PROTEIN


(Wolinella
succinogenes)
PF00890
(FAD_binding_2)
PF02910
(Succ_DH_flav_C)
PF13085
(Fer2_3)
PF13183
(Fer4_8)
4 SER A  61
GLY A 134
GLU B 140
GLU B 138
None
1.27A 3raeB-1qlbA:
0.0
3raeD-1qlbA:
undetectable
3raeB-1qlbA:
24.67
3raeD-1qlbA:
18.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1vl4 PMBA-RELATED PROTEIN

(Thermotoga
maritima)
PF01523
(PmbA_TldD)
4 SER A 368
GLY A 361
GLU A 358
GLU A 360
None
1.22A 3raeB-1vl4A:
undetectable
3raeD-1vl4A:
undetectable
3raeB-1vl4A:
22.58
3raeD-1vl4A:
20.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2amc PHENYLALANYL-TRNA
SYNTHETASE ALPHA
CHAIN
PHENYLALANYL-TRNA
SYNTHETASE BETA
CHAIN


(Thermus
thermophilus)
PF01409
(tRNA-synt_2d)
PF01588
(tRNA_bind)
PF03147
(FDX-ACB)
PF03483
(B3_4)
PF03484
(B5)
4 SER A 180
GLY A 281
GLU B  31
GLU A 279
TYR  A 888 (-2.7A)
None
None
None
1.18A 3raeB-2amcA:
1.6
3raeD-2amcA:
undetectable
3raeB-2amcA:
20.59
3raeD-2amcA:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2cp6 RESTIN

(Homo sapiens)
PF01302
(CAP_GLY)
4 SER A  22
GLY A  35
GLU A  67
GLU A  38
None
1.37A 3raeB-2cp6A:
undetectable
3raeD-2cp6A:
undetectable
3raeB-2cp6A:
15.05
3raeD-2cp6A:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hsi PUTATIVE PEPTIDASE
M23


(Pseudomonas
aeruginosa)
PF01551
(Peptidase_M23)
4 SER A  79
GLY A  57
GLU A  97
GLU A  88
None
1.23A 3raeB-2hsiA:
undetectable
3raeD-2hsiA:
undetectable
3raeB-2hsiA:
21.05
3raeD-2hsiA:
20.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2jg2 SERINE
PALMITOYLTRANSFERASE


(Sphingomonas
paucimobilis)
PF00155
(Aminotran_1_2)
4 SER A 308
GLY A 243
GLU A 253
GLU A 248
None
1.35A 3raeB-2jg2A:
undetectable
3raeD-2jg2A:
2.0
3raeB-2jg2A:
22.24
3raeD-2jg2A:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2w4e MUTT/NUDIX FAMILY
PROTEIN


(Deinococcus
radiodurans)
PF00293
(NUDIX)
4 SER A 134
GLY A  95
GLU A 113
GLU A 109
None
1.30A 3raeB-2w4eA:
undetectable
3raeD-2w4eA:
undetectable
3raeB-2w4eA:
13.50
3raeD-2w4eA:
19.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2x50 TRYPANOTHIONE
REDUCTASE


(Leishmania
infantum)
PF02852
(Pyr_redox_dim)
PF07992
(Pyr_redox_2)
4 SER A 368
GLY A 229
GLU A 379
GLU A 380
None
1.39A 3raeB-2x50A:
undetectable
3raeD-2x50A:
undetectable
3raeB-2x50A:
21.50
3raeD-2x50A:
21.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2zfd CALCINEURIN B-LIKE
PROTEIN 2
PUTATIVE
UNCHARACTERIZED
PROTEIN T20L15_90


(Arabidopsis
thaliana)
PF03822
(NAF)
PF13499
(EF-hand_7)
PF13833
(EF-hand_8)
4 SER A 127
GLY B 318
GLU B 386
GLU B 398
None
1.37A 3raeB-2zfdA:
undetectable
3raeD-2zfdA:
undetectable
3raeB-2zfdA:
19.76
3raeD-2zfdA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3buj CALO2

(Micromonospora
echinospora)
PF00067
(p450)
4 SER A 346
GLY A 339
GLU A  84
GLU A  51
None
1.35A 3raeB-3bujA:
0.5
3raeD-3bujA:
undetectable
3raeB-3bujA:
23.22
3raeD-3bujA:
19.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3cf4 ACETYL-COA
DECARBOXYLASE/SYNTHA
SE ALPHA SUBUNIT
ACETYL-COA
DECARBOXYLASE/SYNTHA
SE EPSILON SUBUNIT


(Methanosarcina
barkeri)
PF02552
(CO_dh)
PF03063
(Prismane)
4 SER G  58
GLY G  42
GLU A 704
GLU A 700
None
1.45A 3raeB-3cf4G:
undetectable
3raeD-3cf4G:
2.7
3raeB-3cf4G:
16.94
3raeD-3cf4G:
19.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3fid PUTATIVE OUTER
MEMBRANE PROTEIN
(LPXR)


(Salmonella
enterica)
PF09982
(DUF2219)
4 SER A   6
GLY A 200
GLU A 167
GLU A 224
None
1.34A 3raeB-3fidA:
undetectable
3raeD-3fidA:
undetectable
3raeB-3fidA:
20.60
3raeD-3fidA:
22.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3n3t PUTATIVE DIGUANYLATE
CYCLASE/PHOSPHODIEST
ERASE


(Thiobacillus
denitrificans)
PF00563
(EAL)
4 SER A 653
GLY A 665
GLU A 720
GLU A 699
None
1.39A 3raeB-3n3tA:
undetectable
3raeD-3n3tA:
undetectable
3raeB-3n3tA:
21.93
3raeD-3n3tA:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3t8i PURINE NUCLEOSIDASE,
(IUNH-2)


(Sulfolobus
solfataricus)
PF01156
(IU_nuc_hydro)
4 SER A 239
GLY A 233
GLU A 201
GLU A 197
None
1.49A 3raeB-3t8iA:
undetectable
3raeD-3t8iA:
1.3
3raeB-3t8iA:
21.58
3raeD-3t8iA:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vyw MNMC2

(Aquifex
aeolicus)
PF05430
(Methyltransf_30)
4 SER A 226
GLY A 104
GLU A 135
GLU A 133
None
SAM  A 501 (-3.6A)
None
SAM  A 501 (-2.3A)
1.19A 3raeB-3vywA:
undetectable
3raeD-3vywA:
undetectable
3raeB-3vywA:
21.00
3raeD-3vywA:
20.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4e2p CYTOCHROME P450
107B1 (P450CVIIB1)


(Streptomyces
himastatinicus)
PF00067
(p450)
4 SER A 281
GLY A  39
GLU A  45
GLU A  42
None
1.50A 3raeB-4e2pA:
1.3
3raeD-4e2pA:
undetectable
3raeB-4e2pA:
22.66
3raeD-4e2pA:
23.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fcs VERSATILE PEROXIDASE
VPL2


(Pleurotus
eryngii)
PF00141
(peroxidase)
PF11895
(Peroxidase_ext)
4 SER A 220
GLY A 183
GLU A  40
GLU A  36
None
None
HEM  A 401 (-3.2A)
HEM  A 401 (-2.8A)
1.35A 3raeB-4fcsA:
undetectable
3raeD-4fcsA:
undetectable
3raeB-4fcsA:
19.72
3raeD-4fcsA:
19.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fdd TRANSPORTIN-1

(Homo sapiens)
PF03810
(IBN_N)
PF13513
(HEAT_EZ)
4 SER A 591
GLY A 692
GLU A 809
GLU A 734
None
1.41A 3raeB-4fddA:
undetectable
3raeD-4fddA:
undetectable
3raeB-4fddA:
20.89
3raeD-4fddA:
14.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4h0p ACETATE KINASE

(Cryptococcus
neoformans)
PF00871
(Acetate_kinase)
4 SER A  16
GLY A 361
GLU A 413
GLU A 364
None
1.16A 3raeB-4h0pA:
undetectable
3raeD-4h0pA:
undetectable
3raeB-4h0pA:
24.31
3raeD-4h0pA:
19.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4hmw PYRIDOXAMINE
5'-PHOSPHATE OXIDASE


(Burkholderia
lata)
PF01243
(Putative_PNPOx)
PF10590
(PNP_phzG_C)
4 SER A  83
GLY A 174
GLU A 118
GLU A 121
FMN  A 301 (-3.4A)
None
None
None
1.38A 3raeB-4hmwA:
undetectable
3raeD-4hmwA:
undetectable
3raeB-4hmwA:
16.70
3raeD-4hmwA:
20.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ho4 GLUCOSE-1-PHOSPHATE
THYMIDYLYLTRANSFERAS
E


(Aneurinibacillus
thermoaerophilus)
PF00483
(NTP_transferase)
4 SER A  53
GLY A  85
GLU A 159
GLU A 196
None
THM  A 302 (-3.6A)
G1P  A 301 (-2.8A)
None
1.39A 3raeB-4ho4A:
undetectable
3raeD-4ho4A:
undetectable
3raeB-4ho4A:
22.63
3raeD-4ho4A:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4k6j WINGS APART-LIKE
PROTEIN HOMOLOG


(Homo sapiens)
PF07814
(WAPL)
4 SER A 884
GLY A 947
GLU A 993
GLU A 945
None
1.18A 3raeB-4k6jA:
undetectable
3raeD-4k6jA:
undetectable
3raeB-4k6jA:
21.78
3raeD-4k6jA:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ug4 CHOLINE SULFATASE

(Sinorhizobium
meliloti)
PF00884
(Sulfatase)
PF12411
(Choline_sulf_C)
4 SER A 295
GLY A 315
GLU A 223
GLU A 303
None
1.27A 3raeB-4ug4A:
undetectable
3raeD-4ug4A:
1.7
3raeB-4ug4A:
21.80
3raeD-4ug4A:
21.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4wd3 L-AMINO ACID LIGASE

(Bacillus
subtilis)
PF13535
(ATP-grasp_4)
4 SER A 216
GLY A 290
GLU A 356
GLU A 358
None
1.16A 3raeB-4wd3A:
3.3
3raeD-4wd3A:
2.9
3raeB-4wd3A:
22.26
3raeD-4wd3A:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4x0o 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 3 PROTEIN 2


(Vibrio cholerae)
PF08541
(ACP_syn_III_C)
PF08545
(ACP_syn_III)
4 SER A 238
GLY A 175
GLU A 326
GLU A   7
None
1.34A 3raeB-4x0oA:
undetectable
3raeD-4x0oA:
undetectable
3raeB-4x0oA:
21.89
3raeD-4x0oA:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zkt BOTULINUM NEUROTOXIN
TYPE E,
NONTOXIC-NONHEMAGGLU
TININ COMPONENT,
NTNH


(Clostridium
botulinum)
PF01742
(Peptidase_M27)
PF07953
(Toxin_R_bind_N)
PF08470
(NTNH_C)
4 SER B 235
GLY B 389
GLU B 218
GLU B 367
None
1.19A 3raeB-4zktB:
2.2
3raeD-4zktB:
undetectable
3raeB-4zktB:
17.36
3raeD-4zktB:
11.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5a5t EUKARYOTIC
TRANSLATION
INITIATION FACTOR 3
SUBUNIT F
EUKARYOTIC
TRANSLATION
INITIATION FACTOR 3
SUBUNIT M


(Oryctolagus
cuniculus)
PF01398
(JAB)
PF01399
(PCI)
PF13012
(MitMem_reg)
4 SER F 211
GLY F 245
GLU M  12
GLU M  11
None
1.48A 3raeB-5a5tF:
undetectable
3raeD-5a5tF:
undetectable
3raeB-5a5tF:
20.40
3raeD-5a5tF:
19.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5iwz SYNAPTONEMAL COMPLEX
PROTEIN 2


(Mus musculus)
no annotation 4 SER A 312
GLY A 218
GLU A 258
GLU A 221
None
1.15A 3raeB-5iwzA:
undetectable
3raeD-5iwzA:
undetectable
3raeB-5iwzA:
24.32
3raeD-5iwzA:
22.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5izd D-GLYCERALDEHYDE
DEHYDROGENASE
(NADP(+))


(Thermoplasma
acidophilum)
PF00171
(Aldedh)
4 SER A 175
GLY A 225
GLU A 458
GLU A 247
NAP  A 601 (-2.6A)
NAP  A 601 (-3.4A)
None
None
1.41A 3raeB-5izdA:
undetectable
3raeD-5izdA:
1.9
3raeB-5izdA:
22.20
3raeD-5izdA:
21.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5o2c SERINE/THREONINE-PRO
TEIN KINASE WNK3


(Homo sapiens)
PF00069
(Pkinase)
PF12202
(OSR1_C)
4 SER A 143
GLY A 164
GLU A 132
GLU A 172
None
1.49A 3raeB-5o2cA:
4.8
3raeD-5o2cA:
undetectable
3raeB-5o2cA:
22.74
3raeD-5o2cA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vrb TRANSKETOLASE

(Neisseria
gonorrhoeae)
PF00456
(Transketolase_N)
PF02779
(Transket_pyr)
PF02780
(Transketolase_C)
4 SER A 392
GLY A 405
GLU A 438
GLU A 408
None
1.48A 3raeB-5vrbA:
undetectable
3raeD-5vrbA:
4.4
3raeB-5vrbA:
20.44
3raeD-5vrbA:
18.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wx1 SERINE PROTEASE NS3

(Pestivirus C)
PF00271
(Helicase_C)
PF05578
(Peptidase_S31)
PF07652
(Flavi_DEAD)
4 SER A 172
GLY A 177
GLU A 100
GLU A  98
None
1.28A 3raeB-5wx1A:
undetectable
3raeD-5wx1A:
3.3
3raeB-5wx1A:
21.09
3raeD-5wx1A:
17.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6arx ACETYLCHOLINESTERASE

(Anopheles
gambiae)
no annotation 4 SER A 227
GLY A 278
GLU A 603
GLU A 359
None
1.49A 3raeB-6arxA:
undetectable
3raeD-6arxA:
3.0
3raeB-6arxA:
11.11
3raeD-6arxA:
13.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6cfw MBH13 NADH
DEHYDROGENASE
SUBUNIT


(Pyrococcus
furiosus)
no annotation 4 SER M 123
GLY M 217
GLU M 234
GLU M 209
None
1.46A 3raeB-6cfwM:
undetectable
3raeD-6cfwM:
undetectable
3raeB-6cfwM:
9.93
3raeD-6cfwM:
15.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ck9 35O22 SCFV HEAVY
CHAIN PORTION
35O22 SCFV LIGHT
CHAIN PORTION
GP41 ECTODOMAIN OF
ENVELOPE
GLYCOPROTEIN GP160


(Homo sapiens;
Human
immunodeficiency
virus 1)
no annotation 4 SER B 534
GLY D 100
GLU E  53
GLU E  50
None
MAN  G 884 (-3.7A)
None
None
1.16A 3raeB-6ck9B:
undetectable
3raeD-6ck9B:
undetectable
3raeB-6ck9B:
10.26
3raeD-6ck9B:
16.90