SIMILAR PATTERNS OF AMINO ACIDS FOR 3NAI_C_URFC521
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1c30 | CARBAMOYL PHOSPHATESYNTHETASE: LARGESUBUNIT (Escherichiacoli) |
PF02142(MGS)PF02786(CPSase_L_D2)PF02787(CPSase_L_D3) | 4 | ARG A 845ASP A 765ASP A 763ARG A 848 | None | 1.26A | 3naiC-1c30A:1.3 | 3naiC-1c30A:19.04 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1dy6 | CARBAPENEM-HYDROLYSING BETA-LACTAMASESME-1 (Serratiamarcescens) |
PF13354(Beta-lactamase2) | 4 | ARG A 153ASP A 163ASP A 179ARG A 65 | None | 1.45A | 3naiC-1dy6A:0.0 | 3naiC-1dy6A:20.50 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 1khw | RNA-DIRECTED RNAPOLYMERASE (Rabbithemorrhagicdisease virus) |
PF00680(RdRP_1) | 4 | ARG A 188ASP A 250ASP A 354ASP A 355 | None MN A 602 ( 2.6A) MN A 601 ( 2.3A) MN A 601 (-4.0A) | 1.09A | 3naiC-1khwA:38.7 | 3naiC-1khwA:32.04 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1los | OROTIDINEMONOPHOSPHATEDECARBOXYLASE (Methanothermobacterthermautotrophicus) |
PF00215(OMPdecase) | 4 | ARG A 4ASP A 7ASP A 174ARG A 168 | None | 1.33A | 3naiC-1losA:undetectable | 3naiC-1losA:21.41 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 1sh2 | RNA POLYMERASE (Norwalk virus) |
PF00680(RdRP_1) | 4 | ARG A 182ASP A 242ASP A 344ARG A 392 | None | 0.91A | 3naiC-1sh2A:50.7 | 3naiC-1sh2A:57.70 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 1sh2 | RNA POLYMERASE (Norwalk virus) |
PF00680(RdRP_1) | 4 | ARG A 182ASP A 343ASP A 344ARG A 392 | None | 0.44A | 3naiC-1sh2A:50.7 | 3naiC-1sh2A:57.70 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1wza | ALPHA-AMYLASE A (Halothermothrixorenii) |
PF00128(Alpha-amylase) | 4 | ARG A 40ASP A 44ASP A 48ASP A 46 | None CA A 601 (-3.3A) CA A 601 (-2.8A) CA A 601 (-3.1A) | 1.44A | 3naiC-1wzaA:0.0 | 3naiC-1wzaA:21.95 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2cm6 | RABPHILIN-3A (Rattusnorvegicus) |
PF00168(C2) | 4 | ASP A 571ASP A 631ASP A 639ARG A 534 | CA A1679 ( 2.2A) CA A1679 ( 2.6A) CA A1680 (-3.1A)None | 1.34A | 3naiC-2cm6A:undetectable | 3naiC-2cm6A:14.51 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2d0j | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN3-BETA-GLUCURONOSYLTRANSFERASE 2 (Homo sapiens) |
PF03360(Glyco_transf_43) | 4 | ASP A 187ASP A 186ASP A 185ARG A 155 | None | 1.30A | 3naiC-2d0jA:0.0 | 3naiC-2d0jA:18.86 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2i44 | SERINE-THREONINEPHOSPHATASE 2C (Toxoplasmagondii) |
PF00481(PP2C) | 4 | ARG A 40ASP A 67ASP A 273ASP A 164 | None CA A 401 ( 2.4A) CA A 401 (-2.8A)None | 1.46A | 3naiC-2i44A:0.0 | 3naiC-2i44A:20.50 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2im9 | HYPOTHETICAL PROTEIN (Legionellapneumophila) |
PF07313(DUF1460) | 4 | ARG A 212ASP A 117ASP A 119ARG A 156 | None | 1.26A | 3naiC-2im9A:undetectable | 3naiC-2im9A:21.12 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2jcb | 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASEFAMILY PROTEIN (Bacillusanthracis) |
PF01812(5-FTHF_cyc-lig) | 4 | ARG A 2ASP A 144ASP A 173ARG A 9 | ADP A1190 (-2.8A) MG A1192 ( 2.5A) MG A1192 ( 3.0A)ADP A1190 (-3.8A) | 1.34A | 3naiC-2jcbA:undetectable | 3naiC-2jcbA:18.16 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2jk1 | HYDROGENASETRANSCRIPTIONALREGULATORY PROTEINHUPR1 (Rhodobactercapsulatus) |
PF00072(Response_reg) | 4 | ARG A 57ASP A 13ASP A 55ASP A 12 | None MG A1144 (-2.4A) MG A1144 (-2.8A) MG A1144 ( 4.6A) | 1.33A | 3naiC-2jk1A:undetectable | 3naiC-2jk1A:14.09 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2oae | DIPEPTIDYL PEPTIDASE4 (Rattusnorvegicus) |
PF00326(Peptidase_S9)PF00930(DPPIV_N) | 4 | ASP A 740ASP A 709ASP A 710ARG A 123 | NoneNoneNoneSO4 A 801 ( 3.1A) | 1.27A | 3naiC-2oaeA:undetectable | 3naiC-2oaeA:22.39 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2p11 | HYPOTHETICAL PROTEIN (Paraburkholderiaxenovorans) |
no annotation | 4 | ASP A 168ASP A 16ASP A 167ARG A 171 | None | 1.29A | 3naiC-2p11A:undetectable | 3naiC-2p11A:19.34 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2p8e | PPM1B BETA ISOFORMVARIANT 6 (Homo sapiens) |
PF00481(PP2C) | 4 | ARG A 33ASP A 60ASP A 243ASP A 151 | None MG A 306 (-2.5A) MG A 306 (-2.9A)None | 1.18A | 3naiC-2p8eA:undetectable | 3naiC-2p8eA:21.51 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2plg | TLL0839 PROTEIN (Synechococcuselongatus) |
PF10722(YbjN) | 4 | ASP A 147ASP A 146ASP A 143ARG A 55 | None | 1.27A | 3naiC-2plgA:undetectable | 3naiC-2plgA:17.18 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2ps2 | PUTATIVE MANDELATERACEMASE/MUCONATELACTONIZING ENZYME (Aspergillusoryzae) |
PF02746(MR_MLE_N)PF13378(MR_MLE_C) | 4 | ARG A 281ASP A 95ASP A 96ARG A 89 | None | 1.25A | 3naiC-2ps2A:undetectable | 3naiC-2ps2A:22.95 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2rhp | THROMBOSPONDIN-2 (Homo sapiens) |
PF02412(TSP_3)PF05735(TSP_C)PF07645(EGF_CA)PF12947(EGF_3) | 4 | ASP A 899ASP A 903ASP A 910ARG A 909 | CA A1174 ( 3.1A) CA A1174 ( 2.5A) CA A1175 ( 2.5A)None | 1.43A | 3naiC-2rhpA:undetectable | 3naiC-2rhpA:21.69 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2vow | SURFACE-ASSOCIATEDPROTEIN (Methylococcuscapsulatus) |
no annotation | 4 | ARG A 153ASP A 274ASP A 250ASP A 252 | None CA A1338 (-2.7A) CA A1338 (-3.2A) CA A1338 (-3.3A) | 1.44A | 3naiC-2vowA:undetectable | 3naiC-2vowA:20.15 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2yvx | MG2+ TRANSPORTERMGTE (Thermusthermophilus) |
PF00571(CBS)PF01769(MgtE)PF03448(MgtE_N) | 4 | ARG A 413ASP A 259ASP A 418ARG A 220 | None MG A 451 (-2.0A) MG A 451 (-3.4A)None | 1.34A | 3naiC-2yvxA:1.0 | 3naiC-2yvxA:24.65 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2zuy | YESX PROTEIN (Bacillussubtilis) |
PF01839(FG-GAP) | 4 | ARG A 283ASP A 189ASP A 191ASP A 193 | None CA A 624 (-3.2A) CA A 624 (-2.9A) CA A 624 (-3.0A) | 1.47A | 3naiC-2zuyA:undetectable | 3naiC-2zuyA:23.33 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3aex | THREONINE SYNTHASE (Thermusthermophilus) |
PF00291(PALP) | 4 | ARG A 242ASP A 135ASP A 136ARG A 233 | None | 1.48A | 3naiC-3aexA:undetectable | 3naiC-3aexA:22.08 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3cm5 | CELL DEATH-RELATEDNUCLEASE 4 (Caenorhabditiselegans) |
PF00929(RNase_T) | 4 | ASP A 111ASP A 15ASP A 115ARG A 118 | None MN A 300 (-2.5A)NoneNone | 1.41A | 3naiC-3cm5A:undetectable | 3naiC-3cm5A:19.89 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3fby | CARTILAGE OLIGOMERICMATRIX PROTEIN (Homo sapiens) |
PF02412(TSP_3)PF05735(TSP_C) | 4 | ARG A 445ASP A 422ASP A 431ASP A 428 | None CA A 815 ( 3.0A) CA A 816 ( 2.6A)None | 1.28A | 3naiC-3fbyA:undetectable | 3naiC-3fbyA:23.24 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3i08 | NEUROGENIC LOCUSNOTCH HOMOLOGPROTEIN 1 (Homo sapiens) |
PF00066(Notch)PF06816(NOD) | 4 | ARG A1595ASP A1543ASP A1558ASP A1547 | None CA A1667 (-2.8A) CA A1667 (-2.1A) CA A1667 (-3.3A) | 1.15A | 3naiC-3i08A:undetectable | 3naiC-3i08A:19.58 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3kb3 | PROTEIN PHOSPHATASE2C 16 (Arabidopsisthaliana) |
PF00481(PP2C) | 4 | ARG B 199ASP B 243ASP B 432ASP B 346 | None MG B 997 (-2.7A) MG B 997 ( 2.9A) MG B 999 (-3.9A) | 1.22A | 3naiC-3kb3B:0.4 | 3naiC-3kb3B:20.28 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3mmp | RNA-DIRECTED RNAPOLYMERASE BETACHAIN (Escherichiavirus Qbeta) |
no annotation | 4 | ARG G 220ASP G 274ASP G 359ASP G 360 | None | 1.36A | 3naiC-3mmpG:6.2 | 3naiC-3mmpG:22.61 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3oh8 | NUCLEOSIDE-DIPHOSPHATE SUGAR EPIMERASE(SULA FAMILY) (Corynebacteriumglutamicum) |
PF01370(Epimerase)PF08338(DUF1731) | 4 | ARG A 138ASP A 344ASP A 347ASP A 343 | None | 1.26A | 3naiC-3oh8A:undetectable | 3naiC-3oh8A:23.51 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3shq | UBLCP1 (Drosophilamelanogaster) |
PF00240(ubiquitin)PF03031(NIF) | 4 | ASP A 255ASP A 146ASP A 254ARG A 258 | MG A 321 (-2.7A) MG A 321 (-2.5A) MG A 321 ( 4.5A)None | 1.42A | 3naiC-3shqA:undetectable | 3naiC-3shqA:18.85 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3zsc | PECTATETRISACCHARIDE-LYASE (Thermotogamaritima) |
PF00544(Pec_lyase_C) | 4 | ARG A 197ASP A 117ASP A 139ASP A 115 | AQA A1338 (-3.2A)NoneAQA A1338 (-3.9A)None | 1.00A | 3naiC-3zscA:undetectable | 3naiC-3zscA:20.87 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4da1 | PROTEIN PHOSPHATASE1K, MITOCHONDRIAL (Homo sapiens) |
PF00481(PP2C) | 4 | ARG A 104ASP A 127ASP A 298ASP A 208 | None MG A 504 ( 2.6A) MG A 504 (-2.8A)None | 1.28A | 3naiC-4da1A:undetectable | 3naiC-4da1A:22.75 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4e69 | 2-DEHYDRO-3-DEOXYGLUCONOKINASE (Oceanicolagranulosus) |
PF00294(PfkB) | 4 | ASP A 161ASP A 256ASP A 29ARG A 165 | None | 1.01A | 3naiC-4e69A:1.1 | 3naiC-4e69A:20.30 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4fnq | ALPHA-GALACTOSIDASEAGAB (Geobacillusstearothermophilus) |
PF02065(Melibiase)PF16874(Glyco_hydro_36C)PF16875(Glyco_hydro_36N) | 4 | ARG A 373ASP A 366ASP A 478ARG A 443 | None | 1.46A | 3naiC-4fnqA:undetectable | 3naiC-4fnqA:21.01 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4nen | INTEGRIN ALPHA-X (Homo sapiens) |
PF00092(VWA)PF01839(FG-GAP)PF08441(Integrin_alpha2) | 4 | ASP A 451ASP A 449ASP A 455ARG A 480 | CA A1115 (-2.7A) CA A1115 (-2.9A) CA A1115 (-2.0A)None | 1.43A | 3naiC-4nenA:undetectable | 3naiC-4nenA:19.93 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5bjx | WLAL PROTEIN (Campylobacterjejuni) |
no annotation | 4 | ARG A 400ASP A 535ASP A 538ARG A 430 | None | 1.44A | 3naiC-5bjxA:undetectable | 3naiC-5bjxA:23.41 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5h9v | RIBONUCLEASE ZC3H12A (Mus musculus) |
PF11977(RNase_Zc3h12a) | 4 | ARG A 183ASP A 141ASP A 225ASP A 226 | None | 1.49A | 3naiC-5h9vA:undetectable | 3naiC-5h9vA:17.82 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5m99 | ALPHA-AMYLASE (Thermotogapetrophila) |
PF00128(Alpha-amylase) | 4 | ARG B 38ASP B 42ASP B 46ASP B 44 | None NA B 602 (-3.2A) NA B 602 (-2.9A) NA B 602 (-3.1A) | 1.48A | 3naiC-5m99B:undetectable | 3naiC-5m99B:21.25 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5szp | PROTOCADHERIN GAMMAB7 (Mus musculus) |
PF00028(Cadherin)PF08266(Cadherin_2) | 4 | ASP A 310ASP A 307ASP A 343ARG A 342 | CA A 507 ( 2.3A) CA A 508 (-3.3A) CA A 508 ( 3.0A)None | 1.10A | 3naiC-5szpA:undetectable | 3naiC-5szpA:23.96 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5tws | HUMAN DNA POLYMERASEMU (Homo sapiens) |
PF10391(DNA_pol_lambd_f)PF14716(HHH_8)PF14791(DNA_pol_B_thumb)PF14792(DNA_pol_B_palm) | 4 | ARG A 323ASP A 330ASP A 332ASP A 418 | GOA A 503 (-3.0A) MG A 501 (-2.6A) NA A 502 (-2.5A) NA A 502 (-3.1A) | 1.47A | 3naiC-5twsA:1.8 | 3naiC-5twsA:22.22 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5w4t | CADHERIN 23 (Danio rerio) |
no annotation | 4 | ASP C 135ASP C 133ASP C 184ARG C 189 | CA C 403 ( 3.1A) CA C 404 (-2.2A) CA C 404 (-3.2A)None | 1.48A | 3naiC-5w4tC:undetectable | 3naiC-5w4tC:9.94 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5w4t | CADHERIN 23 (Danio rerio) |
no annotation | 4 | ASP C 135ASP C 184ASP C 186ARG C 189 | CA C 403 ( 3.1A) CA C 404 (-3.2A)NoneNone | 1.15A | 3naiC-5w4tC:undetectable | 3naiC-5w4tC:9.94 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5xt3 | PHOSPHODIESTERASEACTING ON CYCLICDINUCLEOTIDES (Staphylococcusaureus) |
no annotation | 4 | ARG A 504ASP A 418ASP A 349ASP A 347 | None MN A 701 ( 2.5A) MN A 701 (-3.2A) MN A 702 (-2.9A) | 1.35A | 3naiC-5xt3A:undetectable | 3naiC-5xt3A:13.64 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6c33 | 5'-3' EXONUCLEASE (Mycolicibacteriumsmegmatis) |
no annotation | 4 | ARG A 79ASP A 125ASP A 146ASP A 9 | None MN A 401 ( 2.7A) MN A 402 (-2.7A) MN A 401 ( 4.1A) | 1.48A | 3naiC-6c33A:undetectable | 3naiC-6c33A:11.04 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6evj | RNA-DIRECTED RNAPOLYMERASE CATALYTICSUBUNIT (Influenza Avirus) |
no annotation | 4 | ARG B 239ASP B 305ASP B 445ASP B 446 | None | 1.36A | 3naiC-6evjB:15.2 | 3naiC-6evjB:9.86 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6f1j | - (-) |
no annotation | 4 | ARG A 51ASP A 160ASP A 177ARG A 237 | EDG A 401 (-4.4A)EDG A 401 (-2.9A)NonePEG A 403 (-4.6A) | 1.25A | 3naiC-6f1jA:undetectable | 3naiC-6f1jA:undetectable |