SIMILAR PATTERNS OF AMINO ACIDS FOR 3KL3_B_DHIB404

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3kl0 GLUCURONOXYLANASE
XYNC

(Bacillus
subtilis) 		PF17189
(Glyco_hydro_30C) 		4 GLU A 140
TYR A 143
TYR A 204
TYR A 231
 HIS  A 405 (-2.7A)
HIS  A 405 (-4.1A)
HIS  A 405 ( 3.5A)
HIS  A 405 (-4.5A)
 0.35A 3kl3B-3kl0A:
68.8		 3kl3B-3kl0A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4fmv GLUCURONOARABINOXYLA
N
ENDO-1,4-BETA-XYLANA
SE

([Clostridium]
papyrosolvens) 		PF02055
(Glyco_hydro_30)
PF17189
(Glyco_hydro_30C) 		4 GLU A 143
TYR A 146
TYR A 207
TYR A 234
 None
 0.41A 3kl3B-4fmvA:
56.9		 3kl3B-4fmvA:
55.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4qaw XYN30D

(Paenibacillus
barcinonensis) 		PF03422
(CBM_6)
PF17189
(Glyco_hydro_30C) 		4 GLU A 138
TYR A 141
TYR A 203
TYR A 230
 None
 0.46A 3kl3B-4qawA:
66.2		 3kl3B-4qawA:
57.98
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4uq9 CARBOHYDRATE BINDING
FAMILY 6

(Ruminiclostridium
thermocellum) 		PF17189
(Glyco_hydro_30C) 		4 GLU A 136
TYR A 139
TYR A 200
TYR A 227
 None
 0.32A 3kl3B-4uq9A:
32.5		 3kl3B-4uq9A:
68.22