SIMILAR PATTERNS OF AMINO ACIDS FOR 3H9U_A_ADNA439

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1eak 72 KDA TYPE IV
COLLAGENASE


(Homo sapiens)
PF00040
(fn2)
PF00413
(Peptidase_M10)
PF01471
(PG_binding_1)
5 LEU A 157
GLN A 442
THR A 155
LEU A 411
GLY A 440
None
1.23A 3h9uA-1eakA:
undetectable
3h9uA-1eakA:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1g8k ARSENITE OXIDASE

(Alcaligenes
faecalis)
PF00384
(Molybdopterin)
PF01568
(Molydop_binding)
5 LEU A 633
THR A 539
LEU A 643
GLY A 621
PHE A 602
None
1.23A 3h9uA-1g8kA:
undetectable
3h9uA-1g8kA:
20.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1h3e TYROSYL-TRNA
SYNTHETASE


(Thermus
thermophilus)
PF00579
(tRNA-synt_1b)
5 LEU A 269
LEU A 243
GLY A 242
HIS A  52
MET A 233
None
None
None
ATP  A1433 (-4.3A)
None
1.44A 3h9uA-1h3eA:
undetectable
3h9uA-1h3eA:
20.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pk1 POLYHOMEOTIC-PROXIMA
L CHROMATIN PROTEIN
SEX COMB ON MIDLEG
CG9495-PA


(Drosophila
melanogaster)
PF00536
(SAM_1)
5 LEU A  57
HIS A  56
GLN A  42
LEU B  70
GLY B  67
None
1.38A 3h9uA-1pk1A:
undetectable
3h9uA-1pk1A:
12.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1t1u CHOLINE
O-ACETYLTRANSFERASE


(Rattus
norvegicus)
PF00755
(Carn_acyltransf)
5 LEU A 516
LEU A  31
GLY A  62
MET A 533
PHE A 534
None
1.49A 3h9uA-1t1uA:
undetectable
3h9uA-1t1uA:
21.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1v8b ADENOSYLHOMOCYSTEINA
SE


(Plasmodium
falciparum)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
8 LEU A  53
HIS A  54
THR A  56
LEU A 392
GLY A 397
HIS A 398
MET A 403
PHE A 407
None
ADN  A 502 (-4.1A)
ADN  A 502 (-3.0A)
ADN  A 502 ( 4.9A)
ADN  A 502 ( 3.7A)
ADN  A 502 ( 3.5A)
ADN  A 502 (-3.6A)
None
0.20A 3h9uA-1v8bA:
55.1
3h9uA-1v8bA:
51.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1vb3 THREONINE SYNTHASE

(Escherichia
coli)
PF00291
(PALP)
PF14821
(Thr_synth_N)
5 LEU A  59
GLN A 116
HIS A 120
MET A 117
PHE A 113
None
1.39A 3h9uA-1vb3A:
2.0
3h9uA-1vb3A:
23.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zj9 PROBABLE
FERREDOXIN-DEPENDENT
NITRITE REDUCTASE
NIRA


(Mycobacterium
tuberculosis)
PF01077
(NIR_SIR)
PF03460
(NIR_SIR_ferr)
5 THR A 158
GLN A 156
THR A 157
LEU A  36
GLY A 197
None
1.49A 3h9uA-1zj9A:
undetectable
3h9uA-1zj9A:
22.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zr6 GLUCOOLIGOSACCHARIDE
OXIDASE


(Sarocladium
strictum)
PF01565
(FAD_binding_4)
PF08031
(BBE)
5 LEU A 125
HIS A 127
THR A 113
GLY A 134
PHE A 200
None
None
None
FAD  A 501 (-3.3A)
None
1.50A 3h9uA-1zr6A:
undetectable
3h9uA-1zr6A:
21.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2e7u GLUTAMATE-1-SEMIALDE
HYDE 2,1-AMINOMUTASE


(Thermus
thermophilus)
PF00202
(Aminotran_3)
5 LEU A  55
HIS A 408
THR A 416
LEU A 404
GLY A 330
None
1.30A 3h9uA-2e7uA:
undetectable
3h9uA-2e7uA:
24.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2eh0 KINESIN-LIKE PROTEIN
KIF1B


(Homo sapiens)
PF00498
(FHA)
PF16183
(Kinesin_assoc)
5 LEU A  11
LEU A  48
GLY A  36
HIS A  57
PHE A  60
None
1.24A 3h9uA-2eh0A:
undetectable
3h9uA-2eh0A:
15.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2g1l KINESIN-LIKE PROTEIN
KIF1C


(Homo sapiens)
PF00498
(FHA)
PF16183
(Kinesin_assoc)
5 LEU A 501
LEU A 534
GLY A 526
HIS A 543
PHE A 546
None
1.07A 3h9uA-2g1lA:
undetectable
3h9uA-2g1lA:
14.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2g5c PREPHENATE
DEHYDROGENASE


(Aquifex
aeolicus)
PF02153
(PDH)
5 THR A 120
LEU A 172
GLY A 145
MET A  96
PHE A  94
None
1.47A 3h9uA-2g5cA:
8.2
3h9uA-2g5cA:
20.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2g5c PREPHENATE
DEHYDROGENASE


(Aquifex
aeolicus)
PF02153
(PDH)
5 THR A 120
LEU A 172
GLY A 146
MET A  96
PHE A  94
None
1.13A 3h9uA-2g5cA:
8.2
3h9uA-2g5cA:
20.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2j7n RNA-DEPENDENT RNA
POLYMERASE


(Neurospora
crassa)
PF05183
(RdRP)
5 LEU A 657
THR A1065
GLY A1057
MET A1051
PHE A1047
None
1.21A 3h9uA-2j7nA:
undetectable
3h9uA-2j7nA:
18.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2nyp BETA-LACTAMASE II

(Bacillus cereus)
PF00753
(Lactamase_B)
5 LEU A 133
HIS A 106
GLN A 128
THR A 131
GLY A 125
None
1.39A 3h9uA-2nypA:
undetectable
3h9uA-2nypA:
21.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2w61 GLYCOLIPID-ANCHORED
SURFACE PROTEIN 2


(Saccharomyces
cerevisiae)
PF03198
(Glyco_hydro_72)
PF07983
(X8)
5 LEU A 169
THR A 103
LEU A 305
GLY A 304
PHE A  52
None
1.44A 3h9uA-2w61A:
undetectable
3h9uA-2w61A:
21.28
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ce6 ADENOSYLHOMOCYSTEINA
SE


(Mycobacterium
tuberculosis)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
10 LEU A  68
HIS A  69
THR A  71
GLN A  73
THR A  74
LEU A 410
GLY A 415
HIS A 416
MET A 421
PHE A 425
None
ADN  A 500 (-4.0A)
ADN  A 500 (-2.8A)
ADN  A 500 (-3.6A)
ADN  A 500 (-4.5A)
ADN  A 500 ( 4.8A)
ADN  A 500 ( 3.6A)
ADN  A 500 ( 3.6A)
ADN  A 500 (-3.7A)
ADN  A 500 (-4.8A)
0.20A 3h9uA-3ce6A:
55.8
3h9uA-3ce6A:
56.91
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3g1u ADENOSYLHOMOCYSTEINA
SE


(Leishmania
major)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
10 LEU A  51
HIS A  52
THR A  54
GLN A  56
THR A  57
LEU A 346
GLY A 351
HIS A 352
MET A 357
PHE A 361
None
ADN  A 438 (-4.0A)
ADN  A 438 (-2.8A)
ADN  A 438 (-3.8A)
ADN  A 438 (-4.6A)
ADN  A 438 ( 4.8A)
ADN  A 438 ( 3.8A)
ADN  A 438 ( 3.6A)
ADN  A 438 (-3.7A)
None
0.19A 3h9uA-3g1uA:
62.4
3h9uA-3g1uA:
85.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ggg PREPHENATE
DEHYDROGENASE


(Aquifex
aeolicus)
no annotation 5 THR D 120
LEU D 172
GLY D 145
MET D  96
PHE D  94
None
1.39A 3h9uA-3gggD:
8.8
3h9uA-3gggD:
22.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ggg PREPHENATE
DEHYDROGENASE


(Aquifex
aeolicus)
no annotation 5 THR D 120
LEU D 172
GLY D 146
MET D  96
PHE D  94
None
1.04A 3h9uA-3gggD:
8.8
3h9uA-3gggD:
22.27
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3glq ADENOSYLHOMOCYSTEINA
SE


(Burkholderia
pseudomallei)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
10 LEU A  61
HIS A  62
THR A  64
GLN A  66
THR A  67
LEU A 388
GLY A 393
HIS A 394
MET A 399
PHE A 403
None
RAB  A 602 (-3.8A)
RAB  A 602 (-2.7A)
RAB  A 602 (-3.9A)
RAB  A 602 (-4.5A)
RAB  A 602 ( 4.7A)
RAB  A 602 ( 3.8A)
NAD  A 601 ( 3.6A)
RAB  A 602 (-3.6A)
None
0.18A 3h9uA-3glqA:
58.4
3h9uA-3glqA:
57.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hdi PROCESSING PROTEASE

(Bacillus
halodurans)
PF00675
(Peptidase_M16)
PF05193
(Peptidase_M16_C)
5 LEU A 269
THR A 318
GLN A 315
THR A 317
LEU A 239
None
1.45A 3h9uA-3hdiA:
undetectable
3h9uA-3hdiA:
20.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jwe MGLL PROTEIN

(Homo sapiens)
PF12146
(Hydrolase_4)
5 LEU A  29
THR A  20
GLN A  22
GLY A  91
HIS A  64
None
1.36A 3h9uA-3jweA:
5.7
3h9uA-3jweA:
22.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k5h PHOSPHORIBOSYL-AMINO
IMIDAZOLE
CARBOXYLASE


(Aspergillus
clavatus)
PF01262
(AlaDh_PNT_C)
PF02222
(ATP-grasp)
5 HIS A 273
THR A 209
GLY A 276
HIS A 277
MET A 313
None
1.40A 3h9uA-3k5hA:
3.3
3h9uA-3k5hA:
22.93
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3n58 ADENOSYLHOMOCYSTEINA
SE


(Brucella
abortus)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
10 LEU A  54
HIS A  55
THR A  57
GLN A  59
THR A  60
LEU A 381
GLY A 386
HIS A 387
MET A 392
PHE A 396
None
ADN  A 500 (-4.0A)
ADN  A 500 (-2.8A)
K  A   2 ( 3.3A)
ADN  A 500 (-4.6A)
ADN  A 500 ( 4.8A)
ADN  A 500 (-3.7A)
ADN  A 500 (-3.4A)
ADN  A 500 (-3.7A)
None
0.19A 3h9uA-3n58A:
19.6
3h9uA-3n58A:
61.02
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3one ADENOSYLHOMOCYSTEINA
SE


(Lupinus luteus)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
10 LEU A  61
HIS A  62
THR A  64
GLN A  66
THR A  67
LEU A 398
GLY A 403
HIS A 404
MET A 409
PHE A 413
None
ADE  A 506 (-4.6A)
ADE  A 506 (-2.8A)
ADE  A 506 (-3.8A)
ADE  A 506 (-4.5A)
ADE  A 506 ( 4.7A)
ADE  A 506 ( 3.6A)
ADE  A 506 (-3.4A)
ADE  A 506 (-3.8A)
ADE  A 506 (-4.9A)
0.49A 3h9uA-3oneA:
56.1
3h9uA-3oneA:
59.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3rq0 GLYCOSYL HYDROLASES
FAMILY PROTEIN 16


(Mycolicibacterium
smegmatis)
PF00722
(Glyco_hydro_16)
5 LEU A 143
GLN A 194
THR A 193
GLY A 121
HIS A 122
None
1.35A 3h9uA-3rq0A:
undetectable
3h9uA-3rq0A:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vsk PENICILLIN-BINDING
PROTEIN 3


(Staphylococcus
aureus)
PF00905
(Transpeptidase)
PF03717
(PBP_dimer)
5 LEU A 531
GLN A 548
THR A 495
GLY A 573
HIS A 550
None
1.23A 3h9uA-3vskA:
undetectable
3h9uA-3vskA:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wsv L-LACTATE
DEHYDROGENASE


(Enterococcus
mundtii)
PF00056
(Ldh_1_N)
PF02866
(Ldh_1_C)
5 LEU A 255
THR A 152
THR A 149
GLY A 172
HIS A 171
None
1.43A 3h9uA-3wsvA:
5.8
3h9uA-3wsvA:
22.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4egx KINESIN-LIKE PROTEIN
KIF1A


(Homo sapiens)
PF00498
(FHA)
PF16183
(Kinesin_assoc)
5 LEU A 494
LEU A 531
GLY A 519
HIS A 540
PHE A 543
None
1.10A 3h9uA-4egxA:
undetectable
3h9uA-4egxA:
18.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ejq KINESIN-LIKE PROTEIN
KIF1A


(Homo sapiens)
PF00498
(FHA)
PF16183
(Kinesin_assoc)
5 LEU A 494
LEU A 531
GLY A 519
HIS A 540
PHE A 543
None
1.04A 3h9uA-4ejqA:
undetectable
3h9uA-4ejqA:
16.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fxb PUTATIVE CYTOCHROME
P450


(Streptomyces
coelicolor)
PF00067
(p450)
5 LEU A 325
GLN A 359
LEU A  68
GLY A 356
HIS A 358
HEM  A 501 (-4.8A)
None
None
None
HEM  A 501 (-3.2A)
1.29A 3h9uA-4fxbA:
undetectable
3h9uA-4fxbA:
19.92
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4lvc S-ADENOSYL-L-HOMOCYS
TEINE HYDROLASE
(SAHASE)


(Bradyrhizobium
elkanii)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
10 LEU A  57
HIS A  58
THR A  60
GLN A  62
THR A  63
LEU A 386
GLY A 391
HIS A 392
MET A 397
PHE A 401
None
ADN  A 501 (-4.0A)
ADN  A 501 (-2.8A)
NH4  A 502 ( 3.1A)
ADN  A 501 (-4.5A)
ADN  A 501 ( 4.7A)
ADN  A 501 (-3.6A)
ADN  A 501 (-3.5A)
ADN  A 501 (-3.7A)
ADN  A 501 (-4.8A)
0.11A 3h9uA-4lvcA:
57.6
3h9uA-4lvcA:
58.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4n8m NUCLEOPHOSMIN

(Mus musculus)
PF03066
(Nucleoplasmin)
5 LEU A  57
HIS A  58
GLN A  84
THR A  78
LEU A  49
None
1.44A 3h9uA-4n8mA:
undetectable
3h9uA-4n8mA:
14.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4xeq TRAP DICARBOXYLATE
TRANSPORTER, DCTP
SUBUNIT


(Desulfovibrio
vulgaris)
PF03480
(DctP)
5 LEU A 116
THR A 248
THR A 103
LEU A 141
GLY A 151
None
1.23A 3h9uA-4xeqA:
undetectable
3h9uA-4xeqA:
22.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ehd NUCLEOPHOSMIN

(Homo sapiens)
PF03066
(Nucleoplasmin)
5 LEU A  57
HIS A  58
GLN A  84
THR A  78
LEU A  49
None
1.42A 3h9uA-5ehdA:
undetectable
3h9uA-5ehdA:
13.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gj3 PERIPLASMIC BINDING
PROTEIN


(Roseiflexus sp.
RS-1)
PF01497
(Peripla_BP_2)
5 LEU A 236
THR A 317
GLN A 288
LEU A 314
GLY A 313
None
1.30A 3h9uA-5gj3A:
3.0
3h9uA-5gj3A:
20.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5jkn PROTEIN FAM63A

(Homo sapiens)
PF04424
(MINDY_DUB)
5 THR A 295
THR A 290
LEU A 241
GLY A 239
HIS A 238
None
1.39A 3h9uA-5jknA:
undetectable
3h9uA-5jknA:
22.05
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5tov ADENOSYLHOMOCYSTEINA
SE


(Thermotoga
maritima)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
5 THR A  46
GLY A 335
HIS A 336
MET A 341
PHE A 345
None
0.80A 3h9uA-5tovA:
28.8
3h9uA-5tovA:
39.29
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5utu ADENOSYLHOMOCYSTEINA
SE


(Cryptosporidium
parvum)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
9 LEU A  52
HIS A  53
THR A  55
THR A  58
LEU A 404
GLY A 409
HIS A 410
MET A 415
PHE A 419
None
SAH  A 502 (-4.0A)
SAH  A 502 (-2.7A)
SAH  A 502 (-4.2A)
SAH  A 502 ( 4.7A)
SAH  A 502 ( 3.7A)
SAH  A 502 ( 3.5A)
SAH  A 502 (-3.6A)
SAH  A 502 (-4.8A)
0.17A 3h9uA-5utuA:
52.9
3h9uA-5utuA:
51.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5v96 S-ADENOSYL-L-HOMOCYS
TEINE HYDROLASE


(Naegleria
fowleri)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
9 LEU A  58
HIS A  59
THR A  61
THR A  64
LEU A 389
GLY A 394
HIS A 395
MET A 400
PHE A 404
None
ADN  A 502 ( 3.9A)
ADN  A 502 (-2.9A)
ADN  A 502 (-4.4A)
ADN  A 502 ( 4.7A)
ADN  A 502 (-3.7A)
ADN  A 502 ( 3.4A)
ADN  A 502 (-3.8A)
ADN  A 502 (-4.9A)
0.15A 3h9uA-5v96A:
56.9
3h9uA-5v96A:
55.69
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5w4b ADENOSYLHOMOCYSTEINA
SE


(Homo sapiens)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
6 LEU A  54
HIS A  55
THR A  57
THR A  60
MET A 358
PHE A 362
None
9W4  A 502 (-3.7A)
9W4  A 502 (-2.9A)
None
9W4  A 502 (-3.6A)
None
0.32A 3h9uA-5w4bA:
46.2
3h9uA-5w4bA:
72.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5w4b ADENOSYLHOMOCYSTEINA
SE


(Homo sapiens)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
5 LEU A  54
THR A  60
HIS A 353
MET A 358
PHE A 362
None
None
NAD  A 501 (-4.5A)
9W4  A 502 (-3.6A)
None
0.71A 3h9uA-5w4bA:
46.2
3h9uA-5w4bA:
72.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xgs RCC1-LIKE G
EXCHANGING
FACTOR-LIKE PROTEIN


(Homo sapiens)
PF00415
(RCC1)
PF13540
(RCC1_2)
5 LEU A 187
HIS A 185
GLY A 255
HIS A 241
PHE A 244
None
1.38A 3h9uA-5xgsA:
undetectable
3h9uA-5xgsA:
22.55
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6aph ADENOSYLHOMOCYSTEINA
SE


(Elizabethkingia
anophelis)
PF00670
(AdoHcyase_NAD)
PF05221
(AdoHcyase)
10 LEU A  57
HIS A  58
THR A  60
GLN A  62
THR A  63
LEU A 352
GLY A 357
HIS A 358
MET A 363
PHE A 367
None
ADN  A 501 (-3.9A)
ADN  A 501 (-2.8A)
ADN  A 501 (-3.8A)
ADN  A 501 (-4.5A)
ADN  A 501 ( 4.8A)
ADN  A 501 (-3.6A)
ADN  A 501 ( 3.5A)
ADN  A 501 (-3.7A)
None
0.14A 3h9uA-6aphA:
62.8
3h9uA-6aphA:
66.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6f3m -

(-)
no annotation 9 HIS B  61
THR B  63
GLN B  65
THR B  66
LEU B 376
GLY B 381
HIS B 382
MET B 387
PHE B 391
ADN  B 502 ( 4.0A)
ADN  B 502 (-2.8A)
K  B 504 ( 3.0A)
ADN  B 502 (-4.6A)
ADN  B 502 ( 4.8A)
ADN  B 502 ( 3.7A)
ADN  B 502 (-3.4A)
ADN  B 502 (-3.7A)
ADN  B 502 (-4.9A)
0.16A 3h9uA-6f3mB:
56.8
3h9uA-6f3mB:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6gbn -

(-)
no annotation 10 LEU A  55
HIS A  56
THR A  58
GLN A  60
THR A  61
LEU A 350
GLY A 355
HIS A 356
MET A 361
PHE A 365
None
ADN  A 501 (-3.9A)
ADN  A 501 (-2.8A)
NA  A 503 ( 3.2A)
ADN  A 501 (-4.6A)
ADN  A 501 ( 4.7A)
ADN  A 501 (-3.8A)
ADN  A 501 (-3.4A)
ADN  A 501 (-3.6A)
None
0.14A 3h9uA-6gbnA:
62.1
3h9uA-6gbnA:
undetectable