SIMILAR PATTERNS OF AMINO ACIDS FOR 3FHX_A_PXLA313_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1arl APO-CARBOXYPEPTIDASE
A=ALPHA= (COX)

(Bos taurus) 		PF00246
(Peptidase_M14) 		4 SER A 266
HIS A 303
THR A 304
VAL A 222
 None
 1.43A 3fhxA-1arlA:
2.4		 3fhxA-1arlA:
21.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1b3j MHC CLASS I HOMOLOG
MIC-A

(Homo sapiens) 		PF00129
(MHC_I)
PF07654
(C1-set) 		4 SER A 215
HIS A 270
THR A 269
VAL A 186
 None
 1.48A 3fhxA-1b3jA:
undetectable		 3fhxA-1b3jA:
21.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1cd1 CD1

(Mus musculus) 		PF07654
(C1-set)
PF16497
(MHC_I_3) 		4 SER A  41
HIS A  38
THR A  50
VAL A  30
 None
 1.39A 3fhxA-1cd1A:
undetectable		 3fhxA-1cd1A:
21.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ez4 LACTATE
DEHYDROGENASE

(Lactobacillus
pentosus) 		PF00056
(Ldh_1_N)
PF02866
(Ldh_1_C) 		4 SER A 317
HIS A 193
THR A 163
VAL A 140
 None
NAD  A1352 (-3.6A)
None
NAD  A1352 (-4.2A)
 1.24A 3fhxA-1ez4A:
2.4		 3fhxA-1ez4A:
20.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1rfv PYRIDOXAL KINASE

(Ovis aries) 		PF08543
(Phos_pyr_kin) 		4 SER A  12
HIS A  46
THR A  47
VAL A 231
 None
 0.71A 3fhxA-1rfvA:
48.2		 3fhxA-1rfvA:
86.54
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1td2 PYRIDOXAMINE KINASE

(Escherichia
coli) 		PF08543
(Phos_pyr_kin) 		4 SER A  10
HIS A  44
THR A  45
VAL A 220
 PXL  A 288 (-2.4A)
PXL  A 288 (-4.9A)
PXL  A 288 (-2.7A)
PXL  A 288 (-4.5A)
 0.73A 3fhxA-1td2A:
37.6		 3fhxA-1td2A:
31.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qfv ISOCITRATE
DEHYDROGENASE [NADP]

(Saccharomyces
cerevisiae) 		PF00180
(Iso_dh) 		4 SER A 331
HIS A 317
THR A 327
VAL A 314
 None
NAP  A1001 (-3.8A)
None
NAP  A1001 ( 3.6A)
 1.31A 3fhxA-2qfvA:
3.1		 3fhxA-2qfvA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ct9 ACETYLORNITHINE
DEACETYLASE

(Bacteroides
thetaiotaomicron) 		PF01546
(Peptidase_M20)
PF07687
(M20_dimer) 		4 SER A 102
HIS A 328
THR A 329
VAL A  77
 None
 1.33A 3fhxA-3ct9A:
undetectable		 3fhxA-3ct9A:
22.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jd5 28S RIBOSOMAL
PROTEIN S2,
MITOCHONDRIAL
28S RIBOSOMAL
PROTEIN S9,
MITOCHONDRIAL

(Bos taurus) 		PF00318
(Ribosomal_S2)
PF00380
(Ribosomal_S9) 		4 SER B 141
HIS B 156
THR I 153
VAL B 134
 None
 1.47A 3fhxA-3jd5B:
undetectable		 3fhxA-3jd5B:
21.45
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3pzs PYRIDOXAMINE KINASE

(Yersinia pestis) 		PF08543
(Phos_pyr_kin) 		4 SER A   9
HIS A  43
THR A  44
VAL A 219
 None
None
None
SO4  A 288 (-3.6A)
 0.45A 3fhxA-3pzsA:
40.9		 3fhxA-3pzsA:
31.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vxi DYP

(Bjerkandera
adusta) 		PF04261
(Dyp_perox) 		4 SER A 361
HIS A 326
THR A 324
VAL A 192
 None
ASC  A 502 (-4.3A)
None
None
 1.29A 3fhxA-3vxiA:
undetectable		 3fhxA-3vxiA:
21.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wsv L-LACTATE
DEHYDROGENASE

(Enterococcus
mundtii) 		PF00056
(Ldh_1_N)
PF02866
(Ldh_1_C) 		4 SER A 302
HIS A 178
THR A 148
VAL A 125
 None
 1.07A 3fhxA-3wsvA:
2.5		 3fhxA-3wsvA:
22.97
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5b6a PYRIDOXAL KINASE
PDXY

(Pseudomonas
aeruginosa) 		PF08543
(Phos_pyr_kin) 		4 SER A  12
HIS A  46
THR A  47
VAL A 221
 TRS  A 301 (-3.1A)
None
TRS  A 301 (-3.0A)
None
 0.40A 3fhxA-5b6aA:
39.8		 3fhxA-5b6aA:
31.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fbz ENZYME SUBTILASE
SUBHAL FROM BACILLUS
HALMAPALUS

(Bacillus
halmapalus) 		PF00082
(Peptidase_S8)
PF04151
(PPC) 		4 SER A 231
HIS A  68
THR A  31
VAL A  72
 None
 1.32A 3fhxA-5fbzA:
3.7		 3fhxA-5fbzA:
20.78
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5trw PYRIDOXAL KINASE
PDXY

(Paraburkholderia
xenovorans) 		PF08543
(Phos_pyr_kin) 		4 SER A  10
HIS A  44
THR A  45
VAL A 218
 None
 0.73A 3fhxA-5trwA:
38.5		 3fhxA-5trwA:
34.26