SIMILAR PATTERNS OF AMINO ACIDS FOR 3BSZ_F_RTLF178
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1ck7 | PROTEIN (GELATINASEA) (Homo sapiens) |
PF00040(fn2)PF00045(Hemopexin)PF00413(Peptidase_M10)PF01471(PG_binding_1) | 5 | LEU A 420ALA A 404PHE A 207ALA A 192TYR A 425 | None | 1.31A | 3bszF-1ck7A:0.2 | 3bszF-1ck7A:14.24 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1gll | GLYCEROL KINASE (Escherichiacoli) |
no annotation | 5 | LEU Y 64ALA Y 18ALA Y 8TYR Y 5GLN Y 73 | None | 1.24A | 3bszF-1gllY:0.0 | 3bszF-1gllY:16.30 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 1iiu | PLASMARETINOL-BINDINGPROTEIN (Gallus gallus) |
PF00061(Lipocalin) | 5 | ALA A 57ALA A 55MET A 88HIS A 104PHE A 135 | RTL A 176 ( 3.8A)RTL A 176 ( 3.8A)RTL A 176 (-3.4A)RTL A 176 ( 4.7A)RTL A 176 ( 4.2A) | 1.34A | 3bszF-1iiuA:30.0 | 3bszF-1iiuA:85.71 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 1iiu | PLASMARETINOL-BINDINGPROTEIN (Gallus gallus) |
PF00061(Lipocalin) | 10 | LEU A 37ALA A 43PHE A 45ALA A 55MET A 73MET A 88TYR A 90GLN A 98HIS A 104PHE A 135 | RTL A 176 ( 4.5A)RTL A 176 ( 4.1A)RTL A 176 ( 4.8A)RTL A 176 ( 3.8A)RTL A 176 ( 4.0A)RTL A 176 (-3.4A)RTL A 176 ( 4.0A)RTL A 176 (-3.8A)RTL A 176 ( 4.7A)RTL A 176 ( 4.2A) | 0.40A | 3bszF-1iiuA:30.0 | 3bszF-1iiuA:85.71 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1lzx | NITRIC-OXIDESYNTHASE (Rattusnorvegicus) |
PF02898(NO_synthase) | 5 | LEU A 396ALA A 405PHE A 704ALA A 408PHE A 579 | NoneNoneHEM A 750 ( 4.6A)NoneNone | 1.42A | 3bszF-1lzxA:0.0 | 3bszF-1lzxA:18.14 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1m9q | ENDOTHELIALNITRIC-OXIDESYNTHASE (Homo sapiens) |
PF02898(NO_synthase) | 5 | LEU A 165ALA A 174PHE A 473ALA A 177PHE A 348 | NoneNoneHEM A 901 (-4.4A)NoneNone | 1.42A | 3bszF-1m9qA:undetectable | 3bszF-1m9qA:17.01 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1ocm | MALONAMIDASE E2 (Bradyrhizobiumjaponicum) |
PF01425(Amidase) | 5 | ALA A 167PHE A 193ALA A 136TYR A 162GLN A 151 | None | 1.30A | 3bszF-1ocmA:0.0 | 3bszF-1ocmA:19.32 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1ofe | FERREDOXIN-DEPENDENTGLUTAMATE SYNTHASE 2 (Synechocystissp. PCC 6803) |
PF00310(GATase_2)PF01493(GXGXG)PF01645(Glu_synthase)PF04898(Glu_syn_central) | 5 | LEU A 668ALA A 449PHE A 773ALA A 772GLN A 675 | None | 1.16A | 3bszF-1ofeA:undetectable | 3bszF-1ofeA:9.33 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1qw5 | NITRIC OXIDESYNTHASE, INDUCIBLE (Mus musculus) |
PF02898(NO_synthase) | 5 | LEU A 303ALA A 347ALA A 345HIS A 224PHE A 241 | None | 1.48A | 3bszF-1qw5A:0.0 | 3bszF-1qw5A:18.93 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1u2v | ACTIN-RELATEDPROTEIN 3 (Bos taurus) |
PF00022(Actin) | 5 | LEU A 101ALA A 7PHE A 390ALA A 385PHE A 110 | None | 1.16A | 3bszF-1u2vA:0.0 | 3bszF-1u2vA:19.31 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2ebd | 3-OXOACYL-[ACYL-CARRIER-PROTEIN]SYNTHASE 3 (Aquifexaeolicus) |
PF08541(ACP_syn_III_C)PF08545(ACP_syn_III) | 5 | LEU A 12ALA A 275PHE A 258ALA A 279GLN A 262 | None | 1.47A | 3bszF-2ebdA:undetectable | 3bszF-2ebdA:20.57 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2gam | BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE (Mus musculus) |
PF02485(Branch) | 5 | ALA A 349ALA A 351TYR A 212GLN A 327PHE A 336 | None | 1.06A | 3bszF-2gamA:undetectable | 3bszF-2gamA:19.78 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 2wq9 | RETINOL-BINDINGPROTEIN 4 (Homo sapiens) |
PF00061(Lipocalin) | 6 | ALA A 57ALA A 55MET A 88HIS A 104GLN A 117PHE A 135 | OLA A1179 ( 3.7A)OLA A1179 (-3.5A)OLA A1179 ( 3.8A)OLA A1179 (-4.5A)OLA A1179 (-3.5A)OLA A1179 (-4.3A) | 1.24A | 3bszF-2wq9A:30.4 | 3bszF-2wq9A:100.00 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 2wq9 | RETINOL-BINDINGPROTEIN 4 (Homo sapiens) |
PF00061(Lipocalin) | 11 | LEU A 37ALA A 43PHE A 45ALA A 55MET A 73MET A 88TYR A 90GLN A 98HIS A 104GLN A 117PHE A 135 | OLA A1179 (-3.4A)OLA A1179 ( 4.0A)OLA A1179 (-4.6A)OLA A1179 (-3.5A)OLA A1179 ( 4.9A)OLA A1179 ( 3.8A)OLA A1179 (-3.7A)NoneOLA A1179 (-4.5A)OLA A1179 (-3.5A)OLA A1179 (-4.3A) | 0.53A | 3bszF-2wq9A:30.4 | 3bszF-2wq9A:100.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2yr5 | PRO-ENZYME OFL-PHENYLALANINEOXIDASE (Pseudomonas sp.P-501) |
no annotation | 5 | LEU A 661ALA A 155PHE A 159ALA A 158PHE A 144 | FAD A 801 (-3.9A)NoneNoneNoneFAD A 801 (-4.3A) | 1.46A | 3bszF-2yr5A:undetectable | 3bszF-2yr5A:13.12 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3e7g | NITRIC OXIDESYNTHASE, INDUCIBLE (Homo sapiens) |
PF02898(NO_synthase) | 5 | LEU A 309ALA A 353ALA A 351HIS A 230PHE A 247 | None | 1.39A | 3bszF-3e7gA:undetectable | 3bszF-3e7gA:17.22 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 3fmz | RETINOL-BINDINGPROTEIN 4 (Homo sapiens) |
PF00061(Lipocalin) | 7 | ALA A 43ALA A 55MET A 73MET A 88TYR A 90GLN A 98HIS A 104 | 2T1 A 184 ( 4.7A)2T1 A 184 ( 4.3A)2T1 A 184 (-3.6A)2T1 A 184 (-3.1A)2T1 A 184 (-3.8A)2T1 A 184 (-3.0A)2T1 A 184 (-3.7A) | 0.97A | 3bszF-3fmzA:29.2 | 3bszF-3fmzA:100.00 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 3fmz | RETINOL-BINDINGPROTEIN 4 (Homo sapiens) |
PF00061(Lipocalin) | 8 | ALA A 43PHE A 45ALA A 55MET A 88TYR A 90GLN A 98HIS A 104GLN A 117 | 2T1 A 184 ( 4.7A)None2T1 A 184 ( 4.3A)2T1 A 184 (-3.1A)2T1 A 184 (-3.8A)2T1 A 184 (-3.0A)2T1 A 184 (-3.7A)None | 0.76A | 3bszF-3fmzA:29.2 | 3bszF-3fmzA:100.00 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 3fmz | RETINOL-BINDINGPROTEIN 4 (Homo sapiens) |
PF00061(Lipocalin) | 6 | ALA A 57ALA A 55MET A 88HIS A 104GLN A 117PHE A 135 | 2T1 A 184 (-3.6A)2T1 A 184 ( 4.3A)2T1 A 184 (-3.1A)2T1 A 184 (-3.7A)None2T1 A 184 (-4.8A) | 1.47A | 3bszF-3fmzA:29.2 | 3bszF-3fmzA:100.00 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 3fmz | RETINOL-BINDINGPROTEIN 4 (Homo sapiens) |
PF00061(Lipocalin) | 7 | LEU A 37ALA A 43ALA A 55MET A 73MET A 88TYR A 90HIS A 104 | 2T1 A 184 (-3.6A)2T1 A 184 ( 4.7A)2T1 A 184 ( 4.3A)2T1 A 184 (-3.6A)2T1 A 184 (-3.1A)2T1 A 184 (-3.8A)2T1 A 184 (-3.7A) | 0.79A | 3bszF-3fmzA:29.2 | 3bszF-3fmzA:100.00 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 3fmz | RETINOL-BINDINGPROTEIN 4 (Homo sapiens) |
PF00061(Lipocalin) | 9 | LEU A 37ALA A 43PHE A 45ALA A 55MET A 88TYR A 90HIS A 104GLN A 117PHE A 135 | 2T1 A 184 (-3.6A)2T1 A 184 ( 4.7A)None2T1 A 184 ( 4.3A)2T1 A 184 (-3.1A)2T1 A 184 (-3.8A)2T1 A 184 (-3.7A)None2T1 A 184 (-4.8A) | 0.55A | 3bszF-3fmzA:29.2 | 3bszF-3fmzA:100.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3h5q | PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE (Staphylococcusaureus) |
PF00591(Glycos_transf_3)PF02885(Glycos_trans_3N)PF07831(PYNP_C) | 5 | LEU A 164ALA A 61ALA A 57MET A 50PHE A 24 | None | 1.32A | 3bszF-3h5qA:undetectable | 3bszF-3h5qA:16.31 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3lij | CALCIUM/CALMODULINDEPENDENT PROTEINKINASE WITH A KINASEDOMAIN AND 4CALMODULIN LIKE EFHANDS (Cryptosporidiumparvum) |
PF00069(Pkinase)PF13499(EF-hand_7) | 5 | LEU A 512ALA A 353PHE A 475ALA A 45GLN A 40 | None | 1.16A | 3bszF-3lijA:undetectable | 3bszF-3lijA:17.08 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3mzb | NICKEL-BINDINGPERIPLASMIC PROTEIN (Escherichiacoli) |
PF00496(SBP_bac_5) | 5 | LEU A 458ALA A 421PHE A 390ALA A 417MET A 411 | None | 1.45A | 3bszF-3mzbA:undetectable | 3bszF-3mzbA:17.54 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3n0t | DIPEPTIDYL PEPTIDASE2 (Homo sapiens) |
PF05577(Peptidase_S28) | 5 | LEU A 135ALA A 169ALA A 187TYR A 163PHE A 399 | None | 1.27A | 3bszF-3n0tA:undetectable | 3bszF-3n0tA:19.49 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3n0t | DIPEPTIDYL PEPTIDASE2 (Homo sapiens) |
PF05577(Peptidase_S28) | 5 | LEU A 135ALA A 169PHE A 412ALA A 184TYR A 163 | None | 1.42A | 3bszF-3n0tA:undetectable | 3bszF-3n0tA:19.49 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3txm | 26S PROTEASOMEREGULATORY COMPLEXSUBUNIT P42B (Drosophilamelanogaster) |
PF01399(PCI) | 5 | LEU A 183ALA A 219PHE A 232ALA A 228GLN A 213 | None | 1.47A | 3bszF-3txmA:undetectable | 3bszF-3txmA:18.14 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3vkg | DYNEIN HEAVY CHAIN,CYTOPLASMIC (Dictyosteliumdiscoideum) |
PF03028(Dynein_heavy)PF07728(AAA_5)PF08393(DHC_N2)PF12774(AAA_6)PF12775(AAA_7)PF12777(MT)PF12780(AAA_8)PF12781(AAA_9) | 5 | LEU A1991ALA A1932ALA A1930MET A1910TYR A1957 | None | 1.34A | 3bszF-3vkgA:undetectable | 3bszF-3vkgA:4.23 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4auo | INTERSTITIALCOLLAGENASE (Homo sapiens) |
PF00045(Hemopexin)PF00413(Peptidase_M10) | 5 | LEU A 216ALA A 200PHE A 178ALA A 163TYR A 221 | None | 1.38A | 3bszF-4auoA:undetectable | 3bszF-4auoA:16.53 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4fvl | COLLAGENASE 3 (Homo sapiens) |
PF00045(Hemopexin)PF00413(Peptidase_M10) | 5 | LEU A 239ALA A 223PHE A 201ALA A 186TYR A 244 | None | 1.30A | 3bszF-4fvlA:undetectable | 3bszF-4fvlA:18.47 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4g8s | NITROREDUCTASEFAMILY PROTEIN (Geobactersulfurreducens) |
PF00881(Nitroreductase) | 5 | ALA A 115PHE A 47TYR A 108GLN A 106PHE A 132 | NoneNoneNoneNoneFMN A 300 (-3.7A) | 1.45A | 3bszF-4g8sA:undetectable | 3bszF-4g8sA:23.39 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4knh | NUP192P (Chaetomiumthermophilum) |
PF11894(Nup192) | 5 | LEU A 497ALA A 529ALA A 520MET A 515TYR A 475 | None | 1.21A | 3bszF-4knhA:undetectable | 3bszF-4knhA:11.46 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4oer | NIKA PROTEIN (Brucella suis) |
PF00496(SBP_bac_5) | 5 | LEU A 456ALA A 419PHE A 388ALA A 415MET A 409 | None | 1.42A | 3bszF-4oerA:undetectable | 3bszF-4oerA:19.42 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4wz9 | AGAP004809-PA (Anophelesgambiae) |
PF01433(Peptidase_M1)PF11838(ERAP1_C) | 5 | LEU A 412ALA A 361PHE A 292TYR A 354GLN A 407 | None | 1.37A | 3bszF-4wz9A:undetectable | 3bszF-4wz9A:10.95 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4zz7 | METHYLMALONATE-SEMIALDEHYDEDEHYDROGENASE (Oceanimonasdoudoroffii) |
PF00171(Aldedh) | 5 | LEU A 118ALA A 65PHE A 69MET A 161TYR A 110 | None | 0.94A | 3bszF-4zz7A:undetectable | 3bszF-4zz7A:18.27 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5bwa | ORNITHINEDECARBOXYLASE (Homo sapiens) |
PF00278(Orn_DAP_Arg_deC)PF02784(Orn_Arg_deC_N) | 5 | LEU A 49ALA A 283PHE A 284ALA A 43MET A 409 | None | 1.19A | 3bszF-5bwaA:undetectable | 3bszF-5bwaA:18.68 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5hb4 | NUP192,NUCLEOPORINNUP192 (Chaetomiumthermophilum) |
PF11894(Nup192) | 5 | LEU B 497ALA B 529ALA B 520MET B 515TYR B 475 | None | 1.17A | 3bszF-5hb4B:undetectable | 3bszF-5hb4B:7.71 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5hr4 | MMEI (Methylophilusmethylotrophus) |
no annotation | 5 | LEU C 266ALA C 269PHE C 271GLN C 420PHE C 233 | None | 1.32A | 3bszF-5hr4C:undetectable | 3bszF-5hr4C:12.16 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5i1t | STAGE II SPORULATIONPROTEIN D (Clostridioidesdifficile) |
PF08486(SpoIID) | 5 | LEU A 98ALA A 110ALA A 327TYR A 194GLN A 147 | NoneNoneNoneCTO A 404 (-3.5A)None | 1.50A | 3bszF-5i1tA:undetectable | 3bszF-5i1tA:18.98 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5jmv | PROBABLEBIFUNCTIONAL TRNATHREONYLCARBAMOYLADENOSINE BIOSYNTHESISPROTEINUNCHARACTERIZEDPROTEIN (Methanocaldococcusjannaschii;Pyrococcusfuriosus) |
PF00814(Peptidase_M22)PF09341(Pcc1) | 5 | LEU A 95ALA A 90PHE A 73ALA A 87TYR D 29 | None | 1.22A | 3bszF-5jmvA:undetectable | 3bszF-5jmvA:18.36 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5l44 | K-26 DIPEPTIDYLCARBOXYPEPTIDASE (Astrosporangiumhypotensionis) |
PF01432(Peptidase_M3) | 5 | LEU A 105PHE A 13ALA A 37MET A 42PHE A 83 | None | 1.44A | 3bszF-5l44A:undetectable | 3bszF-5l44A:13.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5nug | CYTOPLASMIC DYNEIN 1HEAVY CHAIN 1 (Homo sapiens) |
PF03028(Dynein_heavy)PF07728(AAA_5)PF08393(DHC_N2)PF12774(AAA_6)PF12775(AAA_7)PF12777(MT)PF12780(AAA_8)PF12781(AAA_9) | 5 | ALA A1862PHE A1836MET A1842GLN A1881GLN A4249 | None | 1.38A | 3bszF-5nugA:undetectable | 3bszF-5nugA:3.03 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6ehn | CARBOHYDRATEESTERASE MZ0003 (unidentifiedprokaryoticorganism) |
no annotation | 5 | LEU A 21ALA A 347ALA A 320MET A 353GLN A 34 | None | 1.34A | 3bszF-6ehnA:undetectable | 3bszF-6ehnA:undetectable |