SIMILAR PATTERNS OF AMINO ACIDS FOR 3BOG_D_DVAD10_0

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1aj6 GYRASE

(Escherichia
coli)
PF02518
(HATPase_c)
3 GLY A 113
GLY A  35
GLY A  28
None
0.37A 3bogD-1aj6A:
0.0
3bogD-1aj6A:
15.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1b3q PROTEIN (CHEMOTAXIS
PROTEIN CHEA)


(Thermotoga
maritima)
PF01584
(CheW)
PF02518
(HATPase_c)
PF02895
(H-kinase_dim)
3 GLY A 414
GLY A 530
GLY A 451
None
0.36A 3bogD-1b3qA:
0.0
3bogD-1b3qA:
11.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1bjw ASPARTATE
AMINOTRANSFERASE


(Thermus
thermophilus)
PF00155
(Aminotran_1_2)
3 GLY A  99
GLY A 231
GLY A 244
LLP  A 234 ( 3.5A)
None
LLP  A 234 ( 4.9A)
0.37A 3bogD-1bjwA:
0.0
3bogD-1bjwA:
13.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1bpl ALPHA-1,4-GLUCAN-4-G
LUCANOHYDROLASE


(Bacillus
licheniformis)
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY B 423
GLY B 397
GLY B 415
None
0.42A 3bogD-1bplB:
0.0
3bogD-1bplB:
11.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1bw0 PROTEIN (TYROSINE
AMINOTRANSFERASE)


(Trypanosoma
cruzi)
PF00155
(Aminotran_1_2)
3 GLY A 112
GLY A 250
GLY A 263
LLP  A 253 ( 4.6A)
None
None
0.34A 3bogD-1bw0A:
0.0
3bogD-1bw0A:
12.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1dju AROMATIC
AMINOTRANSFERASE


(Pyrococcus
horikoshii)
PF00155
(Aminotran_1_2)
3 GLY A  95
GLY A 230
GLY A 243
PLP  A 400 (-3.2A)
None
PLP  A 400 ( 4.9A)
0.34A 3bogD-1djuA:
0.0
3bogD-1djuA:
12.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1e43 ALPHA-AMYLASE

(Bacillus
amyloliquefaciens)
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY A 423
GLY A 397
GLY A 415
None
0.40A 3bogD-1e43A:
0.0
3bogD-1e43A:
11.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1f3r FV ANTIBODY FRAGMENT

(Rattus
norvegicus)
PF07686
(V-set)
3 GLY B 135
GLY B 130
GLY B 134
None
0.43A 3bogD-1f3rB:
0.0
3bogD-1f3rB:
17.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1fno PEPTIDASE T

(Salmonella
enterica)
PF01546
(Peptidase_M20)
PF07687
(M20_dimer)
3 GLY A 389
GLY A 199
GLY A 374
None
0.42A 3bogD-1fnoA:
0.0
3bogD-1fnoA:
11.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1g8k ARSENITE OXIDASE

(Alcaligenes
faecalis)
PF00384
(Molybdopterin)
PF01568
(Molydop_binding)
3 GLY A 171
GLY A 426
GLY A 172
None
0.41A 3bogD-1g8kA:
undetectable
3bogD-1g8kA:
9.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1gxk CHROMOSOME
SEGREGATION SMC
PROTEIN


(Thermotoga
maritima)
PF06470
(SMC_hinge)
3 GLY A 615
GLY A 578
GLY A 611
None
0.39A 3bogD-1gxkA:
undetectable
3bogD-1gxkA:
18.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1i5a CHEMOTAXIS PROTEIN
CHEA


(Thermotoga
maritima)
PF02518
(HATPase_c)
3 GLY A 414
GLY A 530
GLY A 451
ACP  A 998 (-3.4A)
None
None
0.39A 3bogD-1i5aA:
undetectable
3bogD-1i5aA:
17.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1l8f ENDOGLUCANASE

(Melanocarpus
albomyces)
PF02015
(Glyco_hydro_45)
3 GLY A 127
GLY A 143
GLY A 148
None
0.30A 3bogD-1l8fA:
undetectable
3bogD-1l8fA:
21.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ldi GLYCEROL UPTAKE
FACILITATOR PROTEIN


(Escherichia
coli)
PF00230
(MIP)
3 GLY A 191
GLY A 199
GLY A 195
None
0.40A 3bogD-1ldiA:
undetectable
3bogD-1ldiA:
16.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1lrw METHANOL
DEHYDROGENASE
SUBUNIT 1


(Paracoccus
denitrificans)
PF01011
(PQQ)
PF13360
(PQQ_2)
3 GLY A 518
GLY A 396
GLY A 477
None
0.39A 3bogD-1lrwA:
undetectable
3bogD-1lrwA:
10.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1mwo ALPHA AMYLASE

(Pyrococcus
woesei)
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY A 363
GLY A 339
GLY A 357
None
0.40A 3bogD-1mwoA:
undetectable
3bogD-1mwoA:
9.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1o4s ASPARTATE
AMINOTRANSFERASE


(Thermotoga
maritima)
PF00155
(Aminotran_1_2)
3 GLY A  97
GLY A 231
GLY A 244
PLP  A1234 (-3.4A)
None
None
0.39A 3bogD-1o4sA:
undetectable
3bogD-1o4sA:
12.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1poj ISOASPARTYL
DIPEPTIDASE


(Escherichia
coli)
PF01979
(Amidohydro_1)
3 GLY A 189
GLY A 160
GLY A 196
None
0.43A 3bogD-1pojA:
undetectable
3bogD-1pojA:
14.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1t5b ACYL CARRIER PROTEIN
PHOSPHODIESTERASE


(Salmonella
enterica)
PF02525
(Flavodoxin_2)
3 GLY A 128
GLY A 162
GLY A 165
None
0.30A 3bogD-1t5bA:
undetectable
3bogD-1t5bA:
16.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1tt7 YHFP

(Bacillus
subtilis)
PF00107
(ADH_zinc_N)
PF08240
(ADH_N)
3 GLY A 101
GLY A  95
GLY A  66
None
0.32A 3bogD-1tt7A:
undetectable
3bogD-1tt7A:
17.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ud3 AMYLASE

(Bacillus sp.
KSM-K38)
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY A 420
GLY A 394
GLY A 412
None
0.43A 3bogD-1ud3A:
undetectable
3bogD-1ud3A:
10.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1urh 3-MERCAPTOPYRUVATE
SULFURTRANSFERASE


(Escherichia
coli)
PF00581
(Rhodanese)
3 GLY A 210
GLY A 124
GLY A 120
None
0.40A 3bogD-1urhA:
undetectable
3bogD-1urhA:
15.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1w6s METHANOL
DEHYDROGENASE
SUBUNIT 1


(Methylobacterium
extorquens)
PF01011
(PQQ)
PF13360
(PQQ_2)
3 GLY A 518
GLY A 396
GLY A 477
None
0.38A 3bogD-1w6sA:
undetectable
3bogD-1w6sA:
10.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1w9x ALPHA AMYLASE

(Bacillus
halmapalus)
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY A 425
GLY A 399
GLY A 417
None
0.42A 3bogD-1w9xA:
undetectable
3bogD-1w9xA:
10.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1xa0 PUTATIVE NADPH
DEPENDENT
OXIDOREDUCTASES


(Geobacillus
stearothermophilus)
PF00107
(ADH_zinc_N)
3 GLY A 100
GLY A  94
GLY A  65
None
0.41A 3bogD-1xa0A:
undetectable
3bogD-1xa0A:
14.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1yle ARGININE
N-SUCCINYLTRANSFERAS
E, ALPHA CHAIN


(Pseudomonas
aeruginosa)
PF04958
(AstA)
3 GLY A 166
GLY A 227
GLY A 257
None
0.39A 3bogD-1yleA:
undetectable
3bogD-1yleA:
12.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zc6 PROBABLE
N-ACETYLGLUCOSAMINE
KINASE


(Chromobacterium
violaceum)
PF01869
(BcrAD_BadFG)
3 GLY A 286
GLY A 120
GLY A 117
None
0.35A 3bogD-1zc6A:
undetectable
3bogD-1zc6A:
18.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2d0v METHANOL
DEHYDROGENASE LARGE
SUBUNIT


(Hyphomicrobium
denitrificans)
PF01011
(PQQ)
PF13360
(PQQ_2)
3 GLY A 518
GLY A 396
GLY A 477
None
0.42A 3bogD-2d0vA:
undetectable
3bogD-2d0vA:
9.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2d5i AZO REDUCTASE

(Escherichia
coli)
PF02525
(Flavodoxin_2)
3 GLY A 127
GLY A 161
GLY A 164
None
0.32A 3bogD-2d5iA:
undetectable
3bogD-2d5iA:
17.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2dgk GLUTAMATE
DECARBOXYLASE BETA


(Escherichia
coli)
PF00282
(Pyridoxal_deC)
3 GLY A 125
GLY A 274
GLY A 285
PLP  A1500 (-3.5A)
None
None
0.42A 3bogD-2dgkA:
undetectable
3bogD-2dgkA:
10.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2die AMYLASE

(Bacillus sp.
(in: Bacteria))
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY A 425
GLY A 399
GLY A 417
None
0.42A 3bogD-2dieA:
undetectable
3bogD-2dieA:
11.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2eng ENDOGLUCANASE V

(Humicola
insolens)
PF02015
(Glyco_hydro_45)
3 GLY A 128
GLY A 144
GLY A 149
None
0.30A 3bogD-2engA:
undetectable
3bogD-2engA:
21.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2iwa GLUTAMINE
CYCLOTRANSFERASE


(Carica papaya)
PF05096
(Glu_cyclase_2)
3 GLY A 133
GLY A  47
GLY A  92
None
0.30A 3bogD-2iwaA:
undetectable
3bogD-2iwaA:
12.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2pff FATTY ACID SYNTHASE
SUBUNIT BETA


(Saccharomyces
cerevisiae)
PF00698
(Acyl_transf_1)
PF16073
(SAT)
3 GLY B 162
GLY B 505
GLY B 161
None
0.43A 3bogD-2pffB:
undetectable
3bogD-2pffB:
3.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qma DIAMINOBUTYRATE-PYRU
VATE TRANSAMINASE
AND
L-2,4-DIAMINOBUTYRAT
E DECARBOXYLASE


(Vibrio
parahaemolyticus)
PF00282
(Pyridoxal_deC)
3 GLY A 733
GLY A 759
GLY A 728
None
0.43A 3bogD-2qmaA:
undetectable
3bogD-2qmaA:
8.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2vug PAB1020

(Pyrococcus
abyssi)
PF09414
(RNA_ligase)
3 GLY A 117
GLY A  67
GLY A  55
None
0.41A 3bogD-2vugA:
undetectable
3bogD-2vugA:
10.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2wge 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 1


(Mycobacterium
tuberculosis)
PF00109
(ketoacyl-synt)
PF02801
(Ketoacyl-synt_C)
3 GLY A  62
GLY A 344
GLY A 240
None
0.33A 3bogD-2wgeA:
undetectable
3bogD-2wgeA:
13.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2wge 3-OXOACYL-[ACYL-CARR
IER-PROTEIN]
SYNTHASE 1


(Mycobacterium
tuberculosis)
PF00109
(ketoacyl-synt)
PF02801
(Ketoacyl-synt_C)
3 GLY A 344
GLY A  62
GLY A 240
None
0.41A 3bogD-2wgeA:
undetectable
3bogD-2wgeA:
13.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2z61 PROBABLE ASPARTATE
AMINOTRANSFERASE 2


(Methanocaldococcus
jannaschii)
PF00155
(Aminotran_1_2)
3 GLY A  97
GLY A 219
GLY A 232
LLP  A 222 ( 3.8A)
None
None
0.37A 3bogD-2z61A:
undetectable
3bogD-2z61A:
8.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3act CELLOBIOSE
PHOSPHORYLASE


(Cellulomonas
gilvus)
PF06165
(Glyco_transf_36)
PF17167
(Glyco_hydro_36)
3 GLY A 681
GLY A 787
GLY A 762
None
0.36A 3bogD-3actA:
undetectable
3bogD-3actA:
7.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3aib GLUCOSYLTRANSFERASE-
SI


(Streptococcus
mutans)
PF02324
(Glyco_hydro_70)
3 GLY A 732
GLY A 693
GLY A 714
None
0.41A 3bogD-3aibA:
undetectable
3bogD-3aibA:
7.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3b9t TWIN-ARGININE
TRANSLOCATION
PATHWAY SIGNAL
PROTEIN


(Methylobacillus
flagellatus)
PF03069
(FmdA_AmdA)
3 GLY A 156
GLY A  85
GLY A 143
None
0.40A 3bogD-3b9tA:
undetectable
3bogD-3b9tA:
10.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3bc9 ALPHA AMYLASE,
CATALYTIC REGION


(Halothermothrix
orenii)
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY A 534
GLY A 507
GLY A 526
None
None
CA  A 705 ( 4.1A)
0.38A 3bogD-3bc9A:
undetectable
3bogD-3bc9A:
8.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dh4 SODIUM/GLUCOSE
COTRANSPORTER


(Vibrio
parahaemolyticus)
PF00474
(SSF)
3 GLY A  81
GLY A 305
GLY A  77
None
0.33A 3bogD-3dh4A:
undetectable
3bogD-3dh4A:
10.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3f9t L-TYROSINE
DECARBOXYLASE MFNA


(Methanocaldococcus
jannaschii)
PF00282
(Pyridoxal_deC)
3 GLY A 184
GLY A 210
GLY A 179
None
0.42A 3bogD-3f9tA:
undetectable
3bogD-3f9tA:
11.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jur EXO-POLY-ALPHA-D-GAL
ACTURONOSIDASE


(Thermotoga
maritima)
PF00295
(Glyco_hydro_28)
PF12708
(Pectate_lyase_3)
3 GLY A 107
GLY A 273
GLY A 268
None
0.42A 3bogD-3jurA:
undetectable
3bogD-3jurA:
10.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k1j ATP-DEPENDENT
PROTEASE LON


(Thermococcus
onnurineus)
PF01078
(Mg_chelatase)
PF05362
(Lon_C)
PF13654
(AAA_32)
3 GLY A 232
GLY A 205
GLY A 209
None
0.41A 3bogD-3k1jA:
undetectable
3bogD-3k1jA:
9.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3l60 BRANCHED-CHAIN
ALPHA-KETO ACID
DEHYDROGENASE


(Mycobacterium
tuberculosis)
PF00198
(2-oxoacid_dh)
3 GLY A 337
GLY A 318
GLY A 315
None
0.41A 3bogD-3l60A:
undetectable
3bogD-3l60A:
16.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lke ENOYL-COA HYDRATASE

(Bacillus
halodurans)
PF00378
(ECH_1)
3 GLY A 116
GLY A  27
GLY A  65
None
0.38A 3bogD-3lkeA:
undetectable
3bogD-3lkeA:
14.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nok GLUTAMINYL CYCLASE

(Myxococcus
xanthus)
PF05096
(Glu_cyclase_2)
3 GLY A 128
GLY A  47
GLY A  88
None
0.30A 3bogD-3nokA:
undetectable
3bogD-3nokA:
16.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nom GLUTAMINE
CYCLOTRANSFERASE


(Zymomonas
mobilis)
PF05096
(Glu_cyclase_2)
3 GLY A 131
GLY A  47
GLY A  91
None
0.37A 3bogD-3nomA:
undetectable
3bogD-3nomA:
12.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nra ASPARTATE
AMINOTRANSFERASE


(Rhodobacter
sphaeroides)
PF00155
(Aminotran_1_2)
3 GLY A 109
GLY A 249
GLY A 262
LLP  A 252 ( 3.5A)
None
None
0.41A 3bogD-3nraA:
undetectable
3bogD-3nraA:
12.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3oep PUTATIVE
UNCHARACTERIZED
PROTEIN TTHA0988


(Thermus
thermophilus)
PF02626
(CT_A_B)
PF02682
(CT_C_D)
3 GLY A 118
GLY A 243
GLY A 246
None
0.40A 3bogD-3oepA:
undetectable
3bogD-3oepA:
11.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3pdx TYROSINE
AMINOTRANSFERASE


(Mus musculus)
PF00155
(Aminotran_1_2)
3 GLY A 143
GLY A 277
GLY A 290
LLP  A 280 ( 3.1A)
None
None
0.42A 3bogD-3pdxA:
undetectable
3bogD-3pdxA:
11.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qgv ALPHA AMYLASE

(Pyrococcus
woesei)
PF00128
(Alpha-amylase)
PF09154
(DUF1939)
3 GLY A 363
GLY A 339
GLY A 357
None
BCD  A 601 (-3.5A)
None
0.40A 3bogD-3qgvA:
undetectable
3bogD-3qgvA:
10.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qwu DNA LIGASE

(Aquifex
aeolicus)
PF09414
(RNA_ligase)
3 GLY A  99
GLY A  50
GLY A  39
None
0.39A 3bogD-3qwuA:
undetectable
3bogD-3qwuA:
11.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ruy ORNITHINE
AMINOTRANSFERASE


(Bacillus
anthracis)
PF00202
(Aminotran_3)
3 GLY A 236
GLY A 316
GLY A 338
None
0.39A 3bogD-3ruyA:
undetectable
3bogD-3ruyA:
12.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3s2u UDP-N-ACETYLGLUCOSAM
INE--N-ACETYLMURAMYL
-(PENTAPEPTIDE)
PYROPHOSPHORYL-UNDEC
APRENOL
N-ACETYLGLUCOSAMINE
TRANSFERASE


(Pseudomonas
aeruginosa)
PF03033
(Glyco_transf_28)
PF04101
(Glyco_tran_28_C)
3 GLY A 187
GLY A 219
GLY A 191
None
0.43A 3bogD-3s2uA:
undetectable
3bogD-3s2uA:
12.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3w77 FMN-DEPENDENT
NADH-AZOREDUCTASE


(Bacillus sp.
B29)
PF02525
(Flavodoxin_2)
3 GLY A 131
GLY A 168
GLY A 171
None
0.35A 3bogD-3w77A:
undetectable
3bogD-3w77A:
17.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3w79 FMN-DEPENDENT
NADH-AZOREDUCTASE


(Bacillus sp.
B29)
PF02525
(Flavodoxin_2)
3 GLY A 134
GLY A 171
GLY A 174
None
0.36A 3bogD-3w79A:
undetectable
3bogD-3w79A:
17.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4aah METHANOL
DEHYDROGENASE


(Methylophilus
methylotrophus)
PF13360
(PQQ_2)
3 GLY A 509
GLY A 389
GLY A 468
None
0.35A 3bogD-4aahA:
undetectable
3bogD-4aahA:
9.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4c0w FMN-DEPENDENT
NADH-AZOREDUCTASE 1


(Pseudomonas
putida)
PF02525
(Flavodoxin_2)
3 GLY A 127
GLY A 162
GLY A 165
None
0.34A 3bogD-4c0wA:
undetectable
3bogD-4c0wA:
18.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4cvq GLUTAMATE-PYRUVATE
AMINOTRANSFERASE
ALAA


(Escherichia
coli)
PF00155
(Aminotran_1_2)
3 GLY A 103
GLY A 237
GLY A 250
PLP  A1240 (-3.2A)
None
PLP  A1240 ( 4.9A)
0.35A 3bogD-4cvqA:
undetectable
3bogD-4cvqA:
11.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4epa PESTICIN RECEPTOR

(Yersinia pestis)
PF00593
(TonB_dep_Rec)
PF07715
(Plug)
3 GLY A 432
GLY A 120
GLY A 116
None
0.42A 3bogD-4epaA:
undetectable
3bogD-4epaA:
9.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ese FMN-DEPENDENT
NADH-AZOREDUCTASE


(Yersinia pestis)
PF02525
(Flavodoxin_2)
3 GLY A 128
GLY A 162
GLY A 165
None
0.30A 3bogD-4eseA:
undetectable
3bogD-4eseA:
15.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fzv MTERF
DOMAIN-CONTAINING
PROTEIN 2


(Homo sapiens)
PF02536
(mTERF)
3 GLY B 135
GLY B 172
GLY B 174
None
0.42A 3bogD-4fzvB:
undetectable
3bogD-4fzvB:
10.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lgn CELLULOSE-BINDING,
FAMILY II


(Acidothermus
cellulolyticus)
no annotation 3 GLY A 453
GLY A 493
GLY A 476
None
0.35A 3bogD-4lgnA:
undetectable
3bogD-4lgnA:
7.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lmh EXTRACELLULAR IRON
OXIDE RESPIRATORY
SYSTEM SURFACE
DECAHEME CYTOCHROME
C COMPONENT OMCA


(Shewanella
oneidensis)
no annotation 3 GLY A 601
GLY A 663
GLY A 669
None
0.34A 3bogD-4lmhA:
undetectable
3bogD-4lmhA:
9.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4mea PREDICTED PROTEIN

(Acinetobacter
nosocomialis)
PF00561
(Abhydrolase_1)
3 GLY A 237
GLY A 299
GLY A 328
None
0.19A 3bogD-4meaA:
undetectable
3bogD-4meaA:
13.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4mm1 GERANYLGERANYLGLYCER
YL PHOSPHATE
SYNTHASE


(Methanothermobacter
thermautotrophicus)
PF01884
(PcrB)
3 GLY A 176
GLY A 140
GLY A 136
1GP  A 301 ( 4.2A)
None
None
0.40A 3bogD-4mm1A:
undetectable
3bogD-4mm1A:
18.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4my5 PUTATIVE AMINO ACID
AMINOTRANSFERASE


(Streptococcus
mutans)
PF00155
(Aminotran_1_2)
3 GLY A  99
GLY A 234
GLY A 247
None
0.40A 3bogD-4my5A:
undetectable
3bogD-4my5A:
9.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4obu PYRIDOXAL-DEPENDENT
DECARBOXYLASE DOMAIN
PROTEIN


([Ruminococcus]
gnavus)
no annotation 3 GLY E 252
GLY E 278
GLY E 247
None
0.38A 3bogD-4obuE:
undetectable
3bogD-4obuE:
12.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4pe5 GLUTAMATE RECEPTOR
IONOTROPIC, NMDA 2B


(Rattus
norvegicus)
PF00060
(Lig_chan)
PF01094
(ANF_receptor)
PF10613
(Lig_chan-Glu_bd)
3 GLY B 487
GLY B 499
GLY B 496
None
0.40A 3bogD-4pe5B:
undetectable
3bogD-4pe5B:
8.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ppm AMINOTRANSFERASE

(Serratia sp.
FS14)
PF00202
(Aminotran_3)
3 GLY A 626
GLY A 711
GLY A 735
None
0.43A 3bogD-4ppmA:
undetectable
3bogD-4ppmA:
7.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4r0i SUPPRESSOR OF
TUMORIGENICITY 14
PROTEIN


(Homo sapiens)
PF00089
(Trypsin)
3 GLY A 193
GLY A 151
GLY A 142
None
0.40A 3bogD-4r0iA:
undetectable
3bogD-4r0iA:
15.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ru5 TAILSPIKE GP27

(Pseudomonas
phage phi297)
no annotation 3 GLY A 508
GLY A 538
GLY A 514
None
0.43A 3bogD-4ru5A:
undetectable
3bogD-4ru5A:
10.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4tqo METHANOL
DEHYDROGENASE
PROTEIN, LARGE
SUBUNIT


(Methylococcus
capsulatus)
no annotation 3 GLY B 539
GLY B 423
GLY B 498
None
0.38A 3bogD-4tqoB:
undetectable
3bogD-4tqoB:
10.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4tvc DEXTRANSUCRASE

(Leuconostoc
mesenteroides)
PF02324
(Glyco_hydro_70)
3 GLY A2461
GLY A2425
GLY A2443
None
0.40A 3bogD-4tvcA:
undetectable
3bogD-4tvcA:
6.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4u9p UPF0264 PROTEIN
MJ1099


(Methanocaldococcus
jannaschii)
PF04476
(4HFCP_synth)
3 GLY A  32
GLY A  60
GLY A  35
None
0.27A 3bogD-4u9pA:
undetectable
3bogD-4u9pA:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zpx ATP-DEPENDENT
PROTEASE LON


(Thermococcus
onnurineus)
PF01078
(Mg_chelatase)
PF13654
(AAA_32)
3 GLY A 232
GLY A 205
GLY A 209
None
0.41A 3bogD-4zpxA:
undetectable
3bogD-4zpxA:
12.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b69 GERANYLGERANYLGLYCER
YL PHOSPHATE
SYNTHASE


(Thermoplasma
acidophilum)
PF01884
(PcrB)
3 GLY A 175
GLY A 139
GLY A 135
None
0.35A 3bogD-5b69A:
undetectable
3bogD-5b69A:
18.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5d1p ATP-DEPENDENT RNA
LIGASE


(Methanothermobacter
thermautotrophicus)
PF09414
(RNA_ligase)
3 GLY A 120
GLY A  70
GLY A  56
None
0.43A 3bogD-5d1pA:
undetectable
3bogD-5d1pA:
11.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gly GLYCOSIDE HYDROLASE
FAMILY 45 PROTEIN


(Thielavia
terrestris)
PF02015
(Glyco_hydro_45)
3 GLY A 129
GLY A 145
GLY A 150
CTR  A 302 (-3.5A)
None
None
0.30A 3bogD-5glyA:
undetectable
3bogD-5glyA:
18.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gz4 SNAKE VENOM
PHOSPHODIESTERASE
(PDE)


(Naja atra)
PF01033
(Somatomedin_B)
PF01223
(Endonuclease_NS)
PF01663
(Phosphodiest)
3 GLY A 459
GLY A 308
GLY A 312
None
0.37A 3bogD-5gz4A:
undetectable
3bogD-5gz4A:
6.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5h4u ENDO-BETA-1,4-GLUCAN
ASE


(Cryptopygus
antarcticus)
PF02015
(Glyco_hydro_45)
3 GLY A 129
GLY A 148
GLY A 153
None
0.37A 3bogD-5h4uA:
undetectable
3bogD-5h4uA:
19.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ip9 DNA-DIRECTED RNA
POLYMERASE II
SUBUNIT RPB1
DNA-DIRECTED RNA
POLYMERASE II
SUBUNIT RPB2


(Saccharomyces
cerevisiae;
Saccharomyces
cerevisiae)
PF00623
(RNA_pol_Rpb1_2)
PF04983
(RNA_pol_Rpb1_3)
PF04990
(RNA_pol_Rpb1_7)
PF04992
(RNA_pol_Rpb1_6)
PF04997
(RNA_pol_Rpb1_1)
PF04998
(RNA_pol_Rpb1_5)
PF05000
(RNA_pol_Rpb1_4)
PF00562
(RNA_pol_Rpb2_6)
PF04560
(RNA_pol_Rpb2_7)
PF04561
(RNA_pol_Rpb2_2)
PF04563
(RNA_pol_Rpb2_1)
PF04565
(RNA_pol_Rpb2_3)
PF04566
(RNA_pol_Rpb2_4)
PF04567
(RNA_pol_Rpb2_5)
3 GLY B1142
GLY A1061
GLY A1437
None
0.36A 3bogD-5ip9B:
undetectable
3bogD-5ip9B:
5.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5jbe INACTIVE
GLUCANSUCRASE


(Lactobacillus
reuteri)
PF02324
(Glyco_hydro_70)
3 GLY A1268
GLY A1231
GLY A1249
None
0.40A 3bogD-5jbeA:
undetectable
3bogD-5jbeA:
7.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5lnk MITOCHONDRIAL
COMPLEX I, 39 KDA
SUBUNIT


(Ovis aries)
no annotation 3 GLY d  12
GLY d  39
GLY d  42
None
0.24A 3bogD-5lnkd:
undetectable
3bogD-5lnkd:
12.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ngy DSR-M GLUCANSUCRASE
INACTIVE MUTANT
E715Q


(Leuconostoc
citreum)
no annotation 3 GLY A 938
GLY A 902
GLY A 920
None
0.38A 3bogD-5ngyA:
undetectable
3bogD-5ngyA:
5.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5nxk SERINE-RICH SECRETED
CELL WALL ANCHORED
(LPXTG-MOTIF )
PROTEIN


(Lactobacillus
reuteri)
no annotation 3 GLY A 329
GLY A 381
GLY A 357
None
0.32A 3bogD-5nxkA:
undetectable
3bogD-5nxkA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5svc ACETONE CARBOXYLASE
ALPHA SUBUNIT


(Xanthobacter
autotrophicus)
PF02538
(Hydantoinase_B)
3 GLY A 627
GLY A 471
GLY A 516
None
0.40A 3bogD-5svcA:
undetectable
3bogD-5svcA:
8.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ucy TUBULIN ALPHA CHAIN

(Tetrahymena
thermophila)
PF00091
(Tubulin)
PF03953
(Tubulin_C)
3 GLY A 143
GLY A  13
GLY A  10
GTP  A 501 (-1.5A)
None
GTP  A 501 (-2.2A)
0.37A 3bogD-5ucyA:
undetectable
3bogD-5ucyA:
8.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wml -

(-)
no annotation 3 GLY A 167
GLY A 303
GLY A 316
PMP  A 501 (-3.4A)
None
None
0.38A 3bogD-5wmlA:
undetectable
3bogD-5wmlA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wya ISOLEUCINE
2-EPIMERASE


(Lactobacillus
buchneri)
PF00202
(Aminotran_3)
3 GLY A 260
GLY A 340
GLY A 364
None
0.42A 3bogD-5wyaA:
undetectable
3bogD-5wyaA:
11.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xm3 GLUCOSE
DEHYDROGENASE


(Methylophaga
aminisulfidivorans)
no annotation 3 GLY A 549
GLY A 427
GLY A 508
None
0.37A 3bogD-5xm3A:
undetectable
3bogD-5xm3A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xog DNA-DIRECTED RNA
POLYMERASE SUBUNIT
DNA-DIRECTED RNA
POLYMERASE SUBUNIT
BETA


(Komagataella
phaffii;
Komagataella
phaffii)
PF00623
(RNA_pol_Rpb1_2)
PF04983
(RNA_pol_Rpb1_3)
PF04990
(RNA_pol_Rpb1_7)
PF04992
(RNA_pol_Rpb1_6)
PF04997
(RNA_pol_Rpb1_1)
PF04998
(RNA_pol_Rpb1_5)
PF05000
(RNA_pol_Rpb1_4)
PF00562
(RNA_pol_Rpb2_6)
PF04560
(RNA_pol_Rpb2_7)
PF04561
(RNA_pol_Rpb2_2)
PF04563
(RNA_pol_Rpb2_1)
PF04565
(RNA_pol_Rpb2_3)
PF04566
(RNA_pol_Rpb2_4)
PF04567
(RNA_pol_Rpb2_5)
3 GLY B1142
GLY A1063
GLY A1440
None
0.38A 3bogD-5xogB:
undetectable
3bogD-5xogB:
4.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5yjp HUMAN CHYMASE

(Homo sapiens)
no annotation 3 GLY A 193
GLY A 151
GLY A 142
8W6  A 304 ( 4.1A)
None
None
0.32A 3bogD-5yjpA:
undetectable
3bogD-5yjpA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6dxp -

(-)
no annotation 3 GLY A 127
GLY A 161
GLY A 164
None
0.32A 3bogD-6dxpA:
undetectable
3bogD-6dxpA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6f2t -

(-)
no annotation 3 GLY A 480
GLY A 329
GLY A 333
None
0.42A 3bogD-6f2tA:
undetectable
3bogD-6f2tA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6f45 -

(-)
no annotation 3 GLY D 197
GLY D 177
GLY D 169
None
0.42A 3bogD-6f45D:
undetectable
3bogD-6f45D:
undetectable