SIMILAR PATTERNS OF AMINO ACIDS FOR 3AG4_B_CHDB1085
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1bhy | P64K (Neisseriameningitidis) |
PF02852(Pyr_redox_dim)PF07992(Pyr_redox_2) | 5 | MET A 548GLY A 546GLU A 483THR A 480GLY A 539 | None | 1.47A | 3ag4A-1bhyA:0.03ag4B-1bhyA:0.03ag4T-1bhyA:0.0 | 3ag4A-1bhyA:20.073ag4B-1bhyA:18.463ag4T-1bhyA:9.54 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1eg7 | FORMYLTETRAHYDROFOLATE SYNTHETASE (Moorellathermoacetica) |
PF01268(FTHFS) | 5 | GLY A1415GLU A1264THR A1266THR A1082GLY A1113 | None | 1.48A | 3ag4A-1eg7A:0.03ag4B-1eg7A:0.03ag4T-1eg7A:0.0 | 3ag4A-1eg7A:23.313ag4B-1eg7A:17.743ag4T-1eg7A:10.89 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1hcy | ARTHROPODANHEMOCYANIN (Panulirusinterruptus) |
PF00372(Hemocyanin_M)PF03722(Hemocyanin_N)PF03723(Hemocyanin_C) | 5 | GLY A 185GLN A 179GLU A 186ARG A 382PHE A 381 | None | 1.39A | 3ag4A-1hcyA:0.03ag4B-1hcyA:0.03ag4T-1hcyA:0.0 | 3ag4A-1hcyA:21.453ag4B-1hcyA:16.063ag4T-1hcyA:9.93 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1k5s | PENICILLIN G ACYLASEBETA SUBUNIT (Escherichiacoli) |
PF01804(Penicil_amidase) | 5 | MET B 485GLU B 482THR B 481PHE B 531GLY B 532 | None | 1.22A | 3ag4A-1k5sB:0.03ag4B-1k5sB:0.03ag4T-1k5sB:0.0 | 3ag4A-1k5sB:20.533ag4B-1k5sB:17.453ag4T-1k5sB:12.50 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1wk4 | TTK003001606 (Thermusthermophilus) |
PF00583(Acetyltransf_1) | 5 | GLN A 101THR A 21THR A 25PHE A 139GLY A 136 | NoneNoneNoneMES A 201 ( 4.3A)MES A 201 (-3.3A) | 1.23A | 3ag4A-1wk4A:undetectable3ag4B-1wk4A:0.03ag4T-1wk4A:undetectable | 3ag4A-1wk4A:14.653ag4B-1wk4A:21.153ag4T-1wk4A:18.86 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2gsk | VITAMIN B12TRANSPORTER BTUB (Escherichiacoli) |
PF00593(TonB_dep_Rec)PF07715(Plug) | 5 | GLY A 119GLN A 372THR A 391ARG A 19GLY A 125 | None | 1.36A | 3ag4A-2gskA:undetectable3ag4B-2gskA:0.03ag4T-2gskA:0.0 | 3ag4A-2gskA:21.563ag4B-2gskA:14.483ag4T-2gskA:10.11 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2jjq | UNCHARACTERIZED RNAMETHYLTRANSFERASEPYRAB10780 (Pyrococcusabyssi) |
PF05958(tRNA_U5-meth_tr) | 5 | GLY A 180GLU A 236ARG A 108PHE A 140GLY A 106 | None | 0.98A | 3ag4A-2jjqA:0.03ag4B-2jjqA:0.03ag4T-2jjqA:0.0 | 3ag4A-2jjqA:19.553ag4B-2jjqA:16.823ag4T-2jjqA:12.66 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2o5h | HYPOTHETICAL PROTEIN (Neisseriameningitidis) |
PF04591(DUF596) | 5 | MET A 109GLY A 108TRP A 110THR A 49PHE A 105 | None | 1.29A | 3ag4A-2o5hA:1.13ag4B-2o5hA:0.03ag4T-2o5hA:0.0 | 3ag4A-2o5hA:13.453ag4B-2o5hA:20.833ag4T-2o5hA:24.17 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2wnb | - (Sus scrofa) |
PF00777(Glyco_transf_29) | 5 | GLY A 291THR A 328ARG A 171PHE A 192GLY A 273 | NoneNoneNoneNoneC5P A1344 (-3.2A) | 1.49A | 3ag4A-2wnbA:0.03ag4B-2wnbA:0.03ag4T-2wnbA:0.0 | 3ag4A-2wnbA:17.883ag4B-2wnbA:18.983ag4T-2wnbA:14.73 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2xhy | 6-PHOSPHO-BETA-GLUCOSIDASE BGLA (Escherichiacoli) |
PF00232(Glyco_hydro_1) | 5 | GLY A 381TRP A 351THR A 435THR A 434GLY A 350 | NoneNoneNoneSO4 A1481 (-4.0A)None | 1.40A | 3ag4A-2xhyA:0.03ag4B-2xhyA:undetectable3ag4T-2xhyA:undetectable | 3ag4A-2xhyA:20.623ag4B-2xhyA:18.603ag4T-2xhyA:10.37 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2y69 | CYTOCHROME C OXIDASEPOLYPEPTIDE 6A2 (Bos taurus) |
PF02046(COX6A) | 5 | ARG G 14ARG G 17PHE G 18PHE G 21GLY G 22 | CHD G1085 (-3.9A)CHD G1085 (-4.4A)CHD G1085 ( 4.3A)NoneCHD G1085 (-3.5A) | 0.00A | 3ag4A-2y69G:undetectable3ag4B-2y69G:undetectable3ag4T-2y69G:9.8 | 3ag4A-2y69G:11.223ag4B-2y69G:20.353ag4T-2y69G:100.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3bt7 | TRNA(URACIL-5-)-METHYLTRANSFERASE (Escherichiacoli) |
PF05958(tRNA_U5-meth_tr) | 5 | MET A 179GLU A 170ARG A 230PHE A 224GLY A 222 | None | 1.44A | 3ag4A-3bt7A:0.03ag4B-3bt7A:undetectable3ag4T-3bt7A:undetectable | 3ag4A-3bt7A:20.943ag4B-3bt7A:20.403ag4T-3bt7A:13.92 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3ce6 | ADENOSYLHOMOCYSTEINASE (Mycobacteriumtuberculosis) |
PF00670(AdoHcyase_NAD)PF05221(AdoHcyase) | 5 | GLY A 359THR A 269ARG A 406PHE A 96GLY A 411 | None | 1.24A | 3ag4A-3ce6A:undetectable3ag4B-3ce6A:undetectable3ag4T-3ce6A:undetectable | 3ag4A-3ce6A:22.593ag4B-3ce6A:18.093ag4T-3ce6A:12.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3cvr | INVASION PLASMIDANTIGEN (Shigellaflexneri) |
PF12468(TTSSLRR)PF14496(NEL) | 5 | MET A 402GLY A 399THR A 392ARG A 375GLY A 484 | None | 1.41A | 3ag4A-3cvrA:undetectable3ag4B-3cvrA:undetectable3ag4T-3cvrA:undetectable | 3ag4A-3cvrA:22.783ag4B-3cvrA:18.503ag4T-3cvrA:9.07 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3fgb | UNCHARACTERIZEDPROTEIN Q89ZH8_BACTN (Bacteroidesthetaiotaomicron) |
PF10282(Lactonase) | 5 | GLY A 153THR A 129ARG A 112PHE A 104GLY A 83 | None | 1.30A | 3ag4A-3fgbA:undetectable3ag4B-3fgbA:undetectable3ag4T-3fgbA:undetectable | 3ag4A-3fgbA:20.443ag4B-3fgbA:21.473ag4T-3fgbA:13.33 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3hn0 | NITRATE TRANSPORTPROTEIN (Parabacteroidesdistasonis) |
no annotation | 5 | GLY A 199GLN A 202THR A 203ARG A 137GLY A 275 | None | 1.47A | 3ag4A-3hn0A:undetectable3ag4B-3hn0A:undetectable3ag4T-3hn0A:undetectable | 3ag4A-3hn0A:19.483ag4B-3hn0A:21.923ag4T-3hn0A:15.47 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3j4u | MAJOR CAPSID PROTEIN (Bordetellavirus BPP1) |
no annotation | 5 | MET A 87GLY A 88GLN A 126THR A 125GLY A 144 | None | 1.46A | 3ag4A-3j4uA:undetectable3ag4B-3j4uA:undetectable3ag4T-3j4uA:undetectable | 3ag4A-3j4uA:21.073ag4B-3j4uA:21.303ag4T-3j4uA:14.44 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3s9b | VIPERA RUSSELLIPROTEINASE RVV-VGAMMA (Daboiasiamensis) |
PF00089(Trypsin) | 5 | GLY A 18ARG A 137ARG A 135PHE A 161GLY A 184 | None | 1.12A | 3ag4A-3s9bA:undetectable3ag4B-3s9bA:undetectable3ag4T-3s9bA:undetectable | 3ag4A-3s9bA:19.003ag4B-3s9bA:21.013ag4T-3s9bA:15.53 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3urh | DIHYDROLIPOYLDEHYDROGENASE (Sinorhizobiummeliloti) |
PF02852(Pyr_redox_dim)PF07992(Pyr_redox_2) | 5 | GLN A 356GLU A 358THR A 355PHE A 383GLY A 397 | None | 1.36A | 3ag4A-3urhA:0.63ag4B-3urhA:undetectable3ag4T-3urhA:undetectable | 3ag4A-3urhA:21.903ag4B-3urhA:16.273ag4T-3urhA:10.56 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 3wy7 | 8-AMINO-7-OXONONANOATE SYNTHASE (Mycolicibacteriumsmegmatis) |
PF00155(Aminotran_1_2) | 5 | GLY A 214GLU A 201THR A 230THR A 231GLY A 94 | None | 1.34A | 3ag4A-3wy7A:undetectable3ag4B-3wy7A:undetectable3ag4T-3wy7A:undetectable | 3ag4A-3wy7A:21.193ag4B-3wy7A:19.493ag4T-3wy7A:12.93 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4cgy | DNA TOPOISOMERASE3-ALPHA (Homo sapiens) |
PF01131(Topoisom_bac)PF01751(Toprim) | 5 | MET A 566GLY A 565THR A 544PHE A 559GLY A 552 | None | 1.49A | 3ag4A-4cgyA:1.63ag4B-4cgyA:undetectable3ag4T-4cgyA:undetectable | 3ag4A-4cgyA:20.213ag4B-4cgyA:12.963ag4T-4cgyA:9.36 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4cu8 | GLYCOSIDE HYDROLASE2 (Streptococcuspneumoniae) |
PF00703(Glyco_hydro_2)PF02836(Glyco_hydro_2_C)PF02837(Glyco_hydro_2_N)PF16355(DUF4982) | 6 | GLY A 597GLN A 503GLU A 505THR A 482PHE A 444GLY A 643 | None | 1.40A | 3ag4A-4cu8A:undetectable3ag4B-4cu8A:undetectable3ag4T-4cu8A:undetectable | 3ag4A-4cu8A:20.583ag4B-4cu8A:14.293ag4T-4cu8A:7.93 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4cu8 | GLYCOSIDE HYDROLASE2 (Streptococcuspneumoniae) |
PF00703(Glyco_hydro_2)PF02836(Glyco_hydro_2_C)PF02837(Glyco_hydro_2_N)PF16355(DUF4982) | 5 | GLY A 597THR A 482THR A 483PHE A 444GLY A 643 | None | 1.44A | 3ag4A-4cu8A:undetectable3ag4B-4cu8A:undetectable3ag4T-4cu8A:undetectable | 3ag4A-4cu8A:20.583ag4B-4cu8A:14.293ag4T-4cu8A:7.93 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4j05 | PHOSPHATETRANSPORTER (Serendipitaindica) |
PF00083(Sugar_tr) | 5 | GLY A 315THR A 433THR A 434PHE A 493GLY A 492 | None | 1.14A | 3ag4A-4j05A:0.73ag4B-4j05A:undetectable3ag4T-4j05A:undetectable | 3ag4A-4j05A:23.833ag4B-4j05A:17.553ag4T-4j05A:10.88 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4lls | GERANYLTRANSTRANSFERASE (Roseobacterdenitrificans) |
PF00348(polyprenyl_synt) | 5 | MET A 149GLY A 177GLN A 175ARG A 44GLY A 184 | GST A 302 ( 4.1A)NoneNoneIPE A 301 (-3.1A)None | 1.41A | 3ag4A-4llsA:1.33ag4B-4llsA:undetectable3ag4T-4llsA:undetectable | 3ag4A-4llsA:20.313ag4B-4llsA:22.933ag4T-4llsA:14.29 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4qdg | PUTATIVE ADHESIN (Bacteroidesthetaiotaomicron) |
PF08842(Mfa2) | 5 | MET A 175THR A 67ARG A 253PHE A 119GLY A 153 | None | 1.31A | 3ag4A-4qdgA:undetectable3ag4B-4qdgA:undetectable3ag4T-4qdgA:undetectable | 3ag4A-4qdgA:20.493ag4B-4qdgA:23.203ag4T-4qdgA:13.97 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4ri2 | PHOTOSYSTEM II 22KDA PROTEIN,CHLOROPLASTIC (Spinaciaoleracea) |
PF00504(Chloroa_b-bind) | 5 | GLN A 169GLU A 159THR A 162PHE A 152PHE A 154 | None | 1.25A | 3ag4A-4ri2A:1.43ag4B-4ri2A:undetectable3ag4T-4ri2A:undetectable | 3ag4A-4ri2A:18.063ag4B-4ri2A:21.953ag4T-4ri2A:18.31 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4v1u | LYND (Lyngbyaaestuarii) |
PF02624(YcaO) | 5 | GLN A 643GLU A 640THR A 639ARG A 384GLY A 420 | None CA A1777 (-2.7A)NoneNoneNone | 1.43A | 3ag4A-4v1uA:undetectable3ag4B-4v1uA:undetectable3ag4T-4v1uA:undetectable | 3ag4A-4v1uA:22.143ag4B-4v1uA:14.643ag4T-4v1uA:7.48 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5c59 | MACROLIDE EXPORTATP-BINDING/PERMEASEPROTEIN MACB (Escherichiacoli) |
PF12704(MacB_PCD) | 5 | GLY A 75THR A 53THR A 177PHE A 94GLY A 78 | None | 1.49A | 3ag4A-5c59A:undetectable3ag4B-5c59A:undetectable3ag4T-5c59A:undetectable | 3ag4A-5c59A:17.693ag4B-5c59A:22.933ag4T-5c59A:15.32 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5e26 | PANTOTHENATE KINASE2, MITOCHONDRIAL (Homo sapiens) |
PF03630(Fumble) | 5 | MET A 298GLY A 299THR A 327PHE A 295PHE A 321 | None | 1.21A | 3ag4A-5e26A:undetectable3ag4B-5e26A:undetectable3ag4T-5e26A:undetectable | 3ag4A-5e26A:20.533ag4B-5e26A:19.843ag4T-5e26A:13.48 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5gq0 | EPITHIOSPECIFIERPROTEIN (Arabidopsisthaliana) |
no annotation | 5 | GLY B 39THR B 73ARG B 94PHE B 100GLY B 92 | None | 1.21A | 3ag4A-5gq0B:undetectable3ag4B-5gq0B:undetectable3ag4T-5gq0B:undetectable | 3ag4A-5gq0B:20.153ag4B-5gq0B:18.623ag4T-5gq0B:12.46 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5u25 | DIHYDROLIPOAMIDEDEHYDROGENASE (E3COMPONENT OFPYRUVATE AND2-OXOGLUTARATEDEHYDROGENASECOMPLEXES) (Neisseriagonorrhoeae) |
PF02852(Pyr_redox_dim)PF07992(Pyr_redox_2) | 5 | MET A 543GLY A 541GLU A 478THR A 475GLY A 534 | None | 1.46A | 3ag4A-5u25A:2.13ag4B-5u25A:undetectable3ag4T-5u25A:undetectable | 3ag4A-5u25A:20.663ag4B-5u25A:15.973ag4T-5u25A:9.34 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5ww1 | PULULLANASE (Paenibacillusbarengoltzii) |
no annotation | 5 | MET A 429GLY A 428THR A 177PHE A 478GLY A 468 | None | 1.23A | 3ag4A-5ww1A:1.43ag4B-5ww1A:undetectable3ag4T-5ww1A:undetectable | 3ag4A-5ww1A:undetectable3ag4B-5ww1A:undetectable3ag4T-5ww1A:undetectable | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5yb7 | L-AMINO ACIDOXIDASE/MONOOXYGENASE (Pseudomonas sp.AIU 813) |
no annotation | 5 | GLY A 519GLU A 518THR A 16THR A 252PHE A 22 | None | 1.45A | 3ag4A-5yb7A:undetectable3ag4B-5yb7A:undetectable3ag4T-5yb7A:undetectable | 3ag4A-5yb7A:undetectable3ag4B-5yb7A:undetectable3ag4T-5yb7A:undetectable | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5z7r | SHORT-CHAIN-ENOYL-COA HYDRATASE (Clostridiumacetobutylicum) |
no annotation | 5 | GLY A 111GLU A 134THR A 140PHE A 90GLY A 86 | None | 0.93A | 3ag4A-5z7rA:undetectable3ag4B-5z7rA:undetectable3ag4T-5z7rA:undetectable | 3ag4A-5z7rA:undetectable3ag4B-5z7rA:undetectable3ag4T-5z7rA:undetectable | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 6bn2 | ACETYL-COAACETYLTRANSFERASE (Elizabethkingiaanophelis) |
no annotation | 5 | MET A 156GLY A 157THR A 242THR A 240PHE A 288 | SCY A 88 ( 4.8A)SCY A 159 ( 4.2A)NoneNoneSCY A 159 ( 4.6A) | 1.50A | 3ag4A-6bn2A:0.23ag4B-6bn2A:undetectable3ag4T-6bn2A:undetectable | 3ag4A-6bn2A:undetectable3ag4B-6bn2A:undetectable3ag4T-6bn2A:undetectable |