SIMILAR PATTERNS OF AMINO ACIDS FOR 2ZQ0_A_ACRA801_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wu8 HYPOTHETICAL PROTEIN
PH0463

(Pyrococcus
horikoshii) 		PF01887
(SAM_adeno_trans) 		5 ILE A 176
GLU A  51
HIS A 100
LYS A  99
GLU A 163
 None
 1.38A 2zq0A-1wu8A:
0.0		 2zq0A-1wu8A:
15.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2i2x METHYLTRANSFERASE 1

(Methanosarcina
barkeri) 		PF12176
(MtaB) 		5 GLU A  86
ASN A  44
SER A 311
GLU A 272
GLU A 164
 K  A 511 (-2.6A)
None
None
None
ZN  A 501 ( 2.3A)
 1.34A 2zq0A-2i2xA:
0.6		 2zq0A-2i2xA:
21.95
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3wfa ALPHA-GLUCOSIDASE

(Bacteroides
thetaiotaomicron) 		PF10566
(Glyco_hydro_97)
PF14508
(GH97_N)
PF14509
(GH97_C) 		12 GLU A 194
ASN A 216
SER A 217
ILE A 335
GLU A 391
TRP A 397
PHE A 401
HIS A 437
LYS A 467
GLU A 526
GLU A 532
TYR A 533
 NA  A 801 (-3.0A)
None
None
None
None
None
None
None
None
NA  A 801 (-2.6A)
NA  A 801 (-2.8A)
None
 0.36A 2zq0A-3wfaA:
63.0		 2zq0A-3wfaA:
97.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4f06 EXTRACELLULAR
LIGAND-BINDING
RECEPTOR

(Rhodopseudomonas
palustris) 		PF13458
(Peripla_BP_6) 		5 ASN A  44
SER A 305
GLU A 376
PHE A 287
GLU A 256
 None
 1.29A 2zq0A-4f06A:
2.3		 2zq0A-4f06A:
18.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gsl 778AA LONG
HYPOTHETICAL
BETA-GALACTOSIDASE

(Pyrococcus
horikoshii) 		PF02449
(Glyco_hydro_42) 		5 GLU A 181
SER A 183
PHE A 189
GLU A 349
GLU A 308
 PO4  A 802 (-3.4A)
None
None
PO4  A 802 (-3.6A)
PO4  A 802 ( 4.4A)
 1.47A 2zq0A-5gslA:
6.1		 2zq0A-5gslA:
20.89
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5hqb ALPHA-GLUCOSIDASE

(Pseudoalteromonas
sp. K8) 		PF10566
(Glyco_hydro_97)
PF14508
(GH97_N)
PF14509
(GH97_C) 		8 GLU A 173
ASN A 170
GLU A 330
TRP A 336
PHE A 341
HIS A 375
LYS A 405
GLU A 474
 GLC  A 712 ( 2.7A)
GLC  A 712 (-3.2A)
GLC  A 711 (-2.7A)
None
GOL  A 706 (-3.5A)
GLC  A 711 (-4.2A)
GLC  A 711 (-2.8A)
CA  A 701 ( 2.9A)
 0.96A 2zq0A-5hqbA:
48.8		 2zq0A-5hqbA:
39.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ngy DSR-M GLUCANSUCRASE
INACTIVE MUTANT
E715Q

(Leuconostoc
citreum) 		no annotation 5 ASN A1277
SER A1276
ILE A1210
PHE A 582
GLU A 568
 None
 1.33A 2zq0A-5ngyA:
3.6		 2zq0A-5ngyA:
20.28