SIMILAR PATTERNS OF AMINO ACIDS FOR 2YLG_A_ASCA130_0

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1by4 PROTEIN (RETINOIC
ACID RECEPTOR
RXR-ALPHA)


(Homo sapiens)
PF00105
(zf-C4)
4 ALA A1136
GLY A1154
CYH A1155
LYS A1156
None
None
ZN  A1330 (-2.2A)
None
1.18A 2ylgA-1by4A:
undetectable
2ylgA-1by4A:
16.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1cit PROTEIN (ORPHAN
NUCLEAR RECEPTOR
NGFI-B)


(Rattus
norvegicus)
PF00105
(zf-C4)
4 ALA A 233
GLY A 251
CYH A 252
LYS A 253
None
None
ZN  A 398 ( 2.5A)
None
1.16A 2ylgA-1citA:
undetectable
2ylgA-1citA:
18.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1gqa CYTOCHROME C'

(Rhodobacter
sphaeroides)
PF01322
(Cytochrom_C_2)
5 ALA A  18
GLY A 116
CYH A 119
LYS A 120
HIS A 123
HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
0.61A 2ylgA-1gqaA:
17.4
2ylgA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1gqa CYTOCHROME C'

(Rhodobacter
sphaeroides)
PF01322
(Cytochrom_C_2)
4 GLY A 117
CYH A 119
LYS A 120
HIS A 123
None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
0.98A 2ylgA-1gqaA:
17.4
2ylgA-1gqaA:
39.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1isu HIGH POTENTIAL IRON
SULFUR PROTEIN


(Rhodocyclus
tenuis)
PF01355
(HIPIP)
4 ALA A  37
GLY A  53
CYH A  22
LYS A  21
None
None
SF4  A  63 (-2.2A)
None
1.49A 2ylgA-1isuA:
undetectable
2ylgA-1isuA:
18.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1mqv CYTOCHROME C'

(Rhodopseudomonas
palustris)
PF01322
(Cytochrom_C_2)
4 GLY A 111
CYH A 113
LYS A 114
HIS A 117
None
HEM  A 150 (-1.9A)
None
HEM  A 150 (-3.3A)
0.90A 2ylgA-1mqvA:
14.9
2ylgA-1mqvA:
36.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1nbb CYTOCHROME C'

(Rhodobacter
capsulatus)
PF01322
(Cytochrom_C_2)
4 GLY A 115
CYH A 118
LYS A 119
HIS A 122
None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
0.17A 2ylgA-1nbbA:
17.5
2ylgA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1nbb CYTOCHROME C'

(Rhodobacter
capsulatus)
PF01322
(Cytochrom_C_2)
4 GLY A 116
CYH A 118
LYS A 119
HIS A 122
None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
0.99A 2ylgA-1nbbA:
17.5
2ylgA-1nbbA:
31.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pn3 GLYCOSYLTRANSFERASE
GTFA


(Amycolatopsis
orientalis)
PF03033
(Glyco_transf_28)
4 ALA A 112
GLY A  92
CYH A  93
LYS A   1
None
1.43A 2ylgA-1pn3A:
undetectable
2ylgA-1pn3A:
15.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pwe L-SERINE DEHYDRATASE

(Rattus
norvegicus)
PF00291
(PALP)
4 ALA A  73
GLY A  46
CYH A  49
LYS A  50
None
1.08A 2ylgA-1pweA:
undetectable
2ylgA-1pweA:
18.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qgd PROTEIN
(TRANSKETOLASE)


(Escherichia
coli)
PF00456
(Transketolase_N)
PF02779
(Transket_pyr)
PF02780
(Transketolase_C)
4 ALA A 227
GLY A 218
CYH A 243
LYS A 244
None
1.09A 2ylgA-1qgdA:
undetectable
2ylgA-1qgdA:
12.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qlb FUMARATE REDUCTASE
FLAVOPROTEIN SUBUNIT


(Wolinella
succinogenes)
PF00890
(FAD_binding_2)
PF02910
(Succ_DH_flav_C)
4 ALA A 209
GLY A 387
CYH A 191
LYS A 190
None
1.42A 2ylgA-1qlbA:
2.5
2ylgA-1qlbA:
11.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qv9 F420-DEPENDENT
METHYLENETETRAHYDROM
ETHANOPTERIN
DEHYDROGENASE


(Methanopyrus
kandleri)
PF01993
(MTD)
4 ALA A  83
GLY A  39
CYH A  11
LYS A  10
None
0.99A 2ylgA-1qv9A:
undetectable
2ylgA-1qv9A:
23.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qyp RNA POLYMERASE II

(Thermococcus
celer)
PF01096
(TFIIS_C)
4 ALA A  26
GLY A  22
LYS A  20
HIS A  51
None
1.30A 2ylgA-1qypA:
undetectable
2ylgA-1qypA:
17.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1tj7 ARGININOSUCCINATE
LYASE


(Escherichia
coli)
PF00206
(Lyase_1)
PF14698
(ASL_C2)
4 ALA A 242
GLY A 297
CYH A 296
LYS A 295
None
1.44A 2ylgA-1tj7A:
2.9
2ylgA-1tj7A:
15.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1u5s CYTOPLASMIC PROTEIN
NCK2


(Homo sapiens)
PF00018
(SH3_1)
4 ALA A  49
GLY A  54
CYH A  46
LYS A  45
None
1.44A 2ylgA-1u5sA:
undetectable
2ylgA-1u5sA:
18.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1vhk HYPOTHETICAL PROTEIN
YQEU


(Bacillus
subtilis)
PF04452
(Methyltrans_RNA)
4 ALA A 173
GLY A 222
CYH A 170
LYS A 169
None
1.10A 2ylgA-1vhkA:
undetectable
2ylgA-1vhkA:
18.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1x3d FIBRONECTIN TYPE-III
DOMAIN CONTAINING
PROTEIN 3A


(Homo sapiens)
PF00041
(fn3)
4 ALA A  83
GLY A  58
CYH A  86
LYS A  87
None
1.50A 2ylgA-1x3dA:
undetectable
2ylgA-1x3dA:
21.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1y07 DESULFOFERRODOXIN
(RBO)


(Treponema
pallidum)
PF01880
(Desulfoferrodox)
4 ALA A  46
GLY A 123
CYH A 119
HIS A  76
None
None
FE  A 130 (-2.3A)
FE  A 130 (-3.5A)
1.39A 2ylgA-1y07A:
undetectable
2ylgA-1y07A:
22.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1yb0 PROPHAGE LAMBDABA02,
N-ACETYLMURAMOYL-L-A
LANINE AMIDASE,
FAMILY 2


(Bacillus
anthracis)
PF01510
(Amidase_2)
4 ALA A  72
GLY A  82
CYH A  75
HIS A  29
None
None
None
ZN  A 160 ( 3.2A)
1.27A 2ylgA-1yb0A:
undetectable
2ylgA-1yb0A:
21.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zc4 RAS-RELATED PROTEIN
RAL-A


(Homo sapiens)
PF00071
(Ras)
4 ALA A 177
GLY A  88
LYS A  16
HIS A  15
None
1.32A 2ylgA-1zc4A:
undetectable
2ylgA-1zc4A:
23.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zki HYPOTHETICAL PROTEIN
PA5202


(Pseudomonas
aeruginosa)
PF03061
(4HBT)
4 ALA A 127
GLY A  61
CYH A  64
HIS A  68
None
1.17A 2ylgA-1zkiA:
undetectable
2ylgA-1zkiA:
17.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bk8 TITIN HEART ISOFORM
N2-B


(Homo sapiens)
PF07679
(I-set)
4 ALA A  87
GLY A   5
CYH A  22
LYS A  23
None
1.44A 2ylgA-2bk8A:
undetectable
2ylgA-2bk8A:
22.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bov RAS-RELATED PROTEIN
RAL-A


(Homo sapiens)
PF00071
(Ras)
4 ALA A 177
GLY A  88
LYS A  16
HIS A  15
None
1.36A 2ylgA-2bovA:
undetectable
2ylgA-2bovA:
24.12
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2ccy CYTOCHROME C

(Phaeospirillum
molischianum)
PF01322
(Cytochrom_C_2)
4 GLY A 115
CYH A 118
LYS A 119
HIS A 122
None
HEM  A 129 (-1.7A)
None
HEM  A 129 (-3.2A)
0.93A 2ylgA-2ccyA:
16.1
2ylgA-2ccyA:
34.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ekl D-3-PHOSPHOGLYCERATE
DEHYDROGENASE


(Sulfurisphaera
tokodaii)
PF00389
(2-Hacid_dh)
PF02826
(2-Hacid_dh_C)
4 ALA A 253
GLY A 249
LYS A 247
HIS A 275
None
1.49A 2ylgA-2eklA:
undetectable
2ylgA-2eklA:
18.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2gl5 PUTATIVE DEHYDRATASE
PROTEIN


(Salmonella
enterica)
PF02746
(MR_MLE_N)
PF13378
(MR_MLE_C)
4 ALA A 341
GLY A 307
CYH A 311
LYS A 309
None
1.31A 2ylgA-2gl5A:
undetectable
2ylgA-2gl5A:
16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hcm DUAL SPECIFICITY
PROTEIN PHOSPHATASE


(Mus musculus)
PF00782
(DSPc)
4 ALA A 104
GLY A  98
CYH A  95
LYS A  96
None
None
None
ZN  A 368 (-4.0A)
1.25A 2ylgA-2hcmA:
undetectable
2ylgA-2hcmA:
23.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2i0k OXIDOREDUCTASE

(Brevibacterium
sterolicum)
PF01565
(FAD_binding_4)
PF09129
(Chol_subst-bind)
4 ALA A 436
GLY A 480
CYH A 479
HIS A 202
None
None
None
FAD  A 700 (-3.9A)
1.45A 2ylgA-2i0kA:
undetectable
2ylgA-2i0kA:
13.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2i0k OXIDOREDUCTASE

(Brevibacterium
sterolicum)
PF01565
(FAD_binding_4)
PF09129
(Chol_subst-bind)
4 ALA A 499
GLY A 480
CYH A 479
HIS A 202
None
None
None
FAD  A 700 (-3.9A)
1.48A 2ylgA-2i0kA:
undetectable
2ylgA-2i0kA:
13.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2i6l MITOGEN-ACTIVATED
PROTEIN KINASE 6


(Homo sapiens)
PF00069
(Pkinase)
4 ALA A 218
GLY A 139
LYS A 141
HIS A 144
None
1.08A 2ylgA-2i6lA:
undetectable
2ylgA-2i6lA:
16.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2i9u CYTOSINE/GUANINE
DEAMINASE RELATED
PROTEIN


(Clostridium
acetobutylicum)
PF01979
(Amidohydro_1)
4 ALA A 323
GLY A 318
CYH A 291
HIS A 269
GUN  A 503 ( 4.1A)
None
None
GUN  A 503 ( 4.4A)
1.37A 2ylgA-2i9uA:
undetectable
2ylgA-2i9uA:
14.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2iod DIHYDROFLAVONOL
4-REDUCTASE


(Vitis vinifera)
PF01370
(Epimerase)
4 ALA A  74
GLY A  80
CYH A  78
LYS A   6
None
1.49A 2ylgA-2iodA:
undetectable
2ylgA-2iodA:
16.32
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2j8w CYTOCHROME C'

(Rubrivivax
gelatinosus)
PF01322
(Cytochrom_C_2)
4 ALA A  20
GLY A 116
CYH A 119
HIS A 123
HEM  A1129 ( 3.7A)
None
HEM  A1129 (-1.8A)
HEM  A1129 (-3.4A)
0.21A 2ylgA-2j8wA:
21.3
2ylgA-2j8wA:
47.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2jh2 O-GLCNACASE NAGJ

(Clostridium
perfringens)
PF00963
(Cohesin)
4 ALA A  40
GLY A  10
LYS A   7
HIS A 126
None
1.44A 2ylgA-2jh2A:
undetectable
2ylgA-2jh2A:
24.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2jk7 BACULOVIRAL IAP
REPEAT-CONTAINING
PROTEIN 4


(Homo sapiens)
PF00653
(BIR)
4 ALA A 321
GLY A 305
CYH A 303
LYS A 250
None
None
ZN  A1347 (-2.2A)
None
1.19A 2ylgA-2jk7A:
undetectable
2ylgA-2jk7A:
21.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2m3v PUTATIVE
UNCHARACTERIZED
PROTEIN


(Pseudomonas
aeruginosa)
PF03162
(Y_phosphatase2)
4 ALA A 104
GLY A 135
CYH A 132
LYS A 133
None
1.49A 2ylgA-2m3vA:
undetectable
2ylgA-2m3vA:
26.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2mfp EC PROTEIN I/II

(Triticum
aestivum)
PF02068
(Metallothio_PEC)
4 ALA A  29
GLY A   8
CYH A   7
LYS A   6
None
None
CD  A 101 (-2.5A)
None
1.08A 2ylgA-2mfpA:
undetectable
2ylgA-2mfpA:
13.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2mfp EC PROTEIN I/II

(Triticum
aestivum)
PF02068
(Metallothio_PEC)
4 ALA A  30
GLY A   8
CYH A   7
LYS A   6
None
None
CD  A 101 (-2.5A)
None
1.38A 2ylgA-2mfpA:
undetectable
2ylgA-2mfpA:
13.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2nll PROTEIN (RETINOIC
ACID RECEPTOR)


(Homo sapiens)
PF00105
(zf-C4)
4 ALA A 136
GLY A 154
CYH A 155
LYS A 156
None
None
ZN  A 250 (-2.3A)
None
1.19A 2ylgA-2nllA:
undetectable
2ylgA-2nllA:
18.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2pt6 SPERMIDINE SYNTHASE

(Plasmodium
falciparum)
PF01564
(Spermine_synth)
PF17284
(Spermine_synt_N)
4 ALA A 257
GLY A 280
LYS A 283
HIS A 304
None
1.34A 2ylgA-2pt6A:
undetectable
2ylgA-2pt6A:
15.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qlt (DL)-GLYCEROL-3-PHOS
PHATASE 1


(Saccharomyces
cerevisiae)
PF13419
(HAD_2)
4 ALA A 207
GLY A 212
CYH A 213
LYS A 214
None
HG  A 276 (-4.0A)
HG  A 276 (-2.0A)
None
1.41A 2ylgA-2qltA:
undetectable
2ylgA-2qltA:
20.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2w3n CARBONIC ANHYDRASE 2

(Cryptococcus
neoformans)
PF00484
(Pro_CA)
4 ALA A  69
GLY A 129
CYH A 127
HIS A 124
None
ACT  A1233 (-3.9A)
ZN  A1232 ( 2.3A)
ZN  A1232 ( 3.3A)
1.48A 2ylgA-2w3nA:
undetectable
2ylgA-2w3nA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2wqy SUCCINATE
DEHYDROGENASE
CYTOCHROME B, SMALL
SUBUNIT


(Gallus gallus)
PF05328
(CybS)
4 ALA D  26
GLY D  32
CYH D  94
LYS D  95
None
None
PEE  D 109 ( 4.8A)
None
1.40A 2ylgA-2wqyD:
4.8
2ylgA-2wqyD:
22.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2x1f MRNA
3'-END-PROCESSING
PROTEIN RNA15


(Saccharomyces
cerevisiae)
PF00076
(RRM_1)
4 ALA A  62
GLY A  92
CYH A  91
LYS A  90
None
G  B   1 ( 3.6A)
None
U  B   2 ( 4.6A)
1.42A 2ylgA-2x1fA:
undetectable
2ylgA-2x1fA:
21.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3cbb HEPATOCYTE NUCLEAR
FACTOR 4-ALPHA, DNA
BINDING DOMAIN


(Homo sapiens)
PF00105
(zf-C4)
4 ALA A 114
GLY A  55
CYH A  51
LYS A  49
None
None
ZN  A1001 (-2.4A)
None
1.26A 2ylgA-3cbbA:
undetectable
2ylgA-3cbbA:
17.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3d2s MUSCLEBLIND-LIKE
PROTEIN 1


(Homo sapiens)
PF00642
(zf-CCCH)
4 ALA A 203
GLY A 196
CYH A 200
HIS A 242
None
None
ZN  A 303 (-2.3A)
None
1.34A 2ylgA-3d2sA:
undetectable
2ylgA-3d2sA:
17.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3deg GTP-BINDING PROTEIN
LEPA


(Escherichia
coli)
PF00009
(GTP_EFTU)
PF00679
(EFG_C)
PF03144
(GTP_EFTU_D2)
PF06421
(LepA_C)
4 ALA C 193
GLY C 253
CYH C 252
LYS C 251
None
1.38A 2ylgA-3degC:
undetectable
2ylgA-3degC:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dzu RETINOIC ACID
RECEPTOR RXR-ALPHA


(Homo sapiens)
PF00104
(Hormone_recep)
PF00105
(zf-C4)
4 ALA A 136
GLY A 154
CYH A 155
LYS A 156
None
None
ZN  A7221 (-2.5A)
None
1.21A 2ylgA-3dzuA:
undetectable
2ylgA-3dzuA:
16.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3egw RESPIRATORY NITRATE
REDUCTASE 1 ALPHA
CHAIN


(Escherichia
coli)
PF00384
(Molybdopterin)
PF01568
(Molydop_binding)
PF14710
(Nitr_red_alph_N)
4 ALA A 595
GLY A 211
CYH A 213
HIS A 604
None
1.36A 2ylgA-3egwA:
undetectable
2ylgA-3egwA:
7.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3fdb PUTATIVE
PLP-DEPENDENT
BETA-CYSTATHIONASE


(Corynebacterium
diphtheriae)
PF00155
(Aminotran_1_2)
4 ALA A 267
GLY A 260
CYH A 231
LYS A 230
None
None
None
CL  A 381 ( 4.3A)
1.45A 2ylgA-3fdbA:
undetectable
2ylgA-3fdbA:
16.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3foj UNCHARACTERIZED
PROTEIN


(Staphylococcus
saprophyticus)
PF00581
(Rhodanese)
4 ALA A  70
GLY A  89
CYH A  63
LYS A  64
None
1.30A 2ylgA-3fojA:
undetectable
2ylgA-3fojA:
19.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3i04 CARBON MONOXIDE
DEHYDROGENASE/ACETYL
-COA SYNTHASE
SUBUNIT BETA


(Moorella
thermoacetica)
PF03063
(Prismane)
4 ALA A 588
GLY A 499
CYH A 550
HIS A 113
CYN  A 900 ( 4.8A)
XCC  A 800 ( 4.1A)
XCC  A 800 ( 2.1A)
CYN  A 900 (-4.1A)
1.45A 2ylgA-3i04A:
undetectable
2ylgA-3i04A:
12.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3i2v ADENYLYLTRANSFERASE
AND
SULFURTRANSFERASE
MOCS3


(Homo sapiens)
PF00581
(Rhodanese)
4 ALA A  87
GLY A  81
CYH A  78
LYS A  79
None
1.49A 2ylgA-3i2vA:
undetectable
2ylgA-3i2vA:
25.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jb9 PRE-MRNA-SPLICING
FACTOR PRP5


(Schizosaccharomyces
pombe)
PF00400
(WD40)
4 ALA K 252
GLY K 224
LYS K 227
HIS K 246
None
1.13A 2ylgA-3jb9K:
undetectable
2ylgA-3jb9K:
11.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kom TRANSKETOLASE

(Francisella
tularensis)
PF00456
(Transketolase_N)
PF02779
(Transket_pyr)
PF02780
(Transketolase_C)
4 ALA A 229
GLY A 220
CYH A 245
LYS A 246
None
1.48A 2ylgA-3komA:
undetectable
2ylgA-3komA:
11.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kv6 JMJC
DOMAIN-CONTAINING
HISTONE
DEMETHYLATION
PROTEIN 1D


(Homo sapiens)
PF00628
(PHD)
PF02373
(JmjC)
4 ALA A 407
GLY A 431
LYS A 433
HIS A 436
None
1.47A 2ylgA-3kv6A:
undetectable
2ylgA-3kv6A:
13.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3l0z PUTATIVE
NICOTINATE-NUCLEOTID
E-DIMETHYLBENZIMIDAZ
OLE
PHOSPHORIBOSYLTRANSF
ERASE


(Methanocaldococcus
jannaschii)
PF02277
(DBI_PRT)
4 ALA A  78
GLY A 149
CYH A  24
HIS A  94
None
1.07A 2ylgA-3l0zA:
undetectable
2ylgA-3l0zA:
19.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3l23 SUGAR PHOSPHATE
ISOMERASE/EPIMERASE


(Parabacteroides
distasonis)
PF01261
(AP_endonuc_2)
4 ALA A 145
GLY A 152
CYH A 153
LYS A 154
None
1.45A 2ylgA-3l23A:
undetectable
2ylgA-3l23A:
17.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lm4 CATECHOL
2,3-DIOXYGENASE


(Rhodococcus
jostii)
PF00903
(Glyoxalase)
4 ALA A 244
GLY A 299
LYS A 248
HIS A 249
None
None
None
HPX  A 406 (-3.4A)
1.42A 2ylgA-3lm4A:
undetectable
2ylgA-3lm4A:
15.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mcw PUTATIVE HYDROLASE

(Chromobacterium
violaceum)
PF00857
(Isochorismatase)
4 ALA A  39
GLY A 119
CYH A 147
HIS A  33
None
1.42A 2ylgA-3mcwA:
undetectable
2ylgA-3mcwA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3opy 6-PHOSPHOFRUCTO-1-KI
NASE BETA-SUBUNIT


(Komagataella
pastoris)
PF00365
(PFK)
4 ALA B 206
GLY B 211
CYH B 212
LYS B 213
None
1.41A 2ylgA-3opyB:
undetectable
2ylgA-3opyB:
9.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qc2 GLYCOSYL HYDROLASE

(Bacteroides
ovatus)
PF04041
(Glyco_hydro_130)
4 ALA A 187
GLY A 200
CYH A 201
LYS A 202
None
1.38A 2ylgA-3qc2A:
undetectable
2ylgA-3qc2A:
16.43
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3vrc CYTOCHROME C'

(Thermochromatium
tepidum)
PF01322
(Cytochrom_C_2)
4 ALA A  20
GLY A 118
CYH A 121
HIS A 125
HEC  A 200 ( 3.8A)
None
HEC  A 200 (-1.9A)
HEC  A 200 (-3.3A)
0.23A 2ylgA-3vrcA:
17.4
2ylgA-3vrcA:
30.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3w3a V-TYPE ATP SYNTHASE
ALPHA CHAIN


(Thermus
thermophilus)
PF00006
(ATP-synt_ab)
PF02874
(ATP-synt_ab_N)
PF16886
(ATP-synt_ab_Xtn)
4 ALA A  16
GLY A  37
CYH A  28
LYS A  29
None
1.36A 2ylgA-3w3aA:
2.7
2ylgA-3w3aA:
11.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4c1o BETA-XYLOSIDASE

(Parageobacillus
thermoglucosidasius)
PF03512
(Glyco_hydro_52)
4 ALA A 539
GLY A 498
CYH A 566
LYS A 565
None
1.44A 2ylgA-4c1oA:
3.0
2ylgA-4c1oA:
11.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4cx9 CYTOCHROME C, CLASS
II


(Shewanella
frigidimarina)
PF01322
(Cytochrom_C_2)
4 ALA A  20
GLY A 115
CYH A 118
LYS A 119
HEC  A1129 (-3.5A)
None
HEC  A1129 (-1.9A)
None
0.38A 2ylgA-4cx9A:
19.9
2ylgA-4cx9A:
41.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ewg BETA-KETOACYL
SYNTHASE


(Paraburkholderia
phymatum)
PF00109
(ketoacyl-synt)
PF02801
(Ketoacyl-synt_C)
4 ALA A 163
GLY A 341
CYH A 340
HIS A 335
None
1.20A 2ylgA-4ewgA:
undetectable
2ylgA-4ewgA:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ewg BETA-KETOACYL
SYNTHASE


(Paraburkholderia
phymatum)
PF00109
(ketoacyl-synt)
PF02801
(Ketoacyl-synt_C)
4 ALA A 394
GLY A 341
CYH A 340
HIS A 335
None
1.27A 2ylgA-4ewgA:
undetectable
2ylgA-4ewgA:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ymr PROTEIN SNX21

(Mus musculus)
no annotation 4 ALA A 251
GLY A 278
CYH A 282
HIS A 283
None
1.41A 2ylgA-4ymrA:
undetectable
2ylgA-4ymrA:
22.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ymr PROTEIN SNX21

(Mus musculus)
no annotation 4 ALA A 254
GLY A 278
CYH A 282
HIS A 283
None
1.44A 2ylgA-4ymrA:
undetectable
2ylgA-4ymrA:
22.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4z9d PERTUSSIS TOXIN-LIKE
SUBUNIT ARTA


(Escherichia
coli)
PF02917
(Pertussis_S1)
4 ALA A  52
GLY A  38
CYH A  41
HIS A  26
NAD  A 202 (-3.5A)
NAD  A 202 (-3.8A)
NAD  A 202 (-4.1A)
NAD  A 202 (-3.8A)
1.42A 2ylgA-4z9dA:
undetectable
2ylgA-4z9dA:
15.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5a11 THIOCYANATE FORMING
PROTEIN


(Thlaspi arvense)
PF01344
(Kelch_1)
4 ALA A  21
GLY A  39
CYH A  37
HIS A 326
None
1.49A 2ylgA-5a11A:
undetectable
2ylgA-5a11A:
16.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5a7v PUTATIVE GLYCOSIDASE
PH117-RELATED


(Bacteroides
thetaiotaomicron)
PF04041
(Glyco_hydro_130)
4 ALA B 184
GLY B 197
CYH B 198
LYS B 199
None
None
None
MAN  B1485 ( 2.8A)
1.41A 2ylgA-5a7vB:
undetectable
2ylgA-5a7vB:
16.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5aex AMMONIUM TRANSPORTER
MEP2


(Saccharomyces
cerevisiae)
PF00909
(Ammonium_transp)
4 ALA A 138
GLY A 143
CYH A 344
HIS A 348
None
1.27A 2ylgA-5aexA:
undetectable
2ylgA-5aexA:
13.87
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5b3i CYTOCHROME C PRIME

(Hydrogenophilus
thermoluteolus)
PF01322
(Cytochrom_C_2)
4 ALA A  20
GLY A 121
CYH A 124
HIS A 128
HEM  A 201 (-3.6A)
None
HEM  A 201 (-1.8A)
HEM  A 201 (-3.4A)
0.18A 2ylgA-5b3iA:
17.5
2ylgA-5b3iA:
34.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b5z PTLCIB4 H88A MUTANT

(Phaeodactylum
tricornutum)
no annotation 4 ALA A 129
GLY A  70
CYH A  46
HIS A 102
None
None
ZN  A 500 (-2.2A)
ZN  A 500 (-3.3A)
1.21A 2ylgA-5b5zA:
undetectable
2ylgA-5b5zA:
17.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5eyi NON-STRUCTURAL
PROTEIN 11


(Porcine
reproductive
and respiratory
syndrome virus)
no annotation 4 ALA A 173
GLY A 133
CYH A 143
HIS A 144
None
None
None
CL  A 302 (-4.8A)
1.09A 2ylgA-5eyiA:
undetectable
2ylgA-5eyiA:
22.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gw5 T-COMPLEX PROTEIN 1
SUBUNIT BETA


(Saccharomyces
cerevisiae)
PF00118
(Cpn60_TCP1)
4 ALA b 364
GLY b 358
CYH b 359
LYS b 360
None
1.45A 2ylgA-5gw5b:
2.6
2ylgA-5gw5b:
13.59
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5gyr CYTOCHROME C'

(Allochromatium
vinosum)
PF01322
(Cytochrom_C_2)
4 GLY A 118
CYH A 121
LYS A 122
HIS A 125
None
HEM  A 201 (-2.2A)
None
HEM  A 201 (-3.4A)
0.47A 2ylgA-5gyrA:
5.3
2ylgA-5gyrA:
32.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5jt4 CYTOCHROME C'

(Achromobacter
xylosoxidans)
PF01322
(Cytochrom_C_2)
4 ALA A  16
CYH A 116
LYS A 117
HIS A 120
HEC  A 201 (-3.4A)
HEC  A 201 (-1.9A)
None
HEC  A 201 (-3.2A)
1.36A 2ylgA-5jt4A:
25.1
2ylgA-5jt4A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5jt4 CYTOCHROME C'

(Achromobacter
xylosoxidans)
PF01322
(Cytochrom_C_2)
5 ALA A  20
GLY A 113
CYH A 116
LYS A 117
HIS A 120
ASC  A 202 ( 3.3A)
ASC  A 202 (-3.9A)
HEC  A 201 (-1.9A)
None
HEC  A 201 (-3.2A)
0.29A 2ylgA-5jt4A:
25.1
2ylgA-5jt4A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5k6d PUTATIVE SECRETED
SALIVARY PROTEIN


(Xenopsylla
cheopis)
no annotation 4 ALA A  25
GLY A  56
LYS A  46
HIS A  47
None
1.35A 2ylgA-5k6dA:
undetectable
2ylgA-5k6dA:
24.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5k8o 5-NITROANTHRANILIC
ACID AMINOHYDROLASE


(Bradyrhizobium
sp.)
PF01546
(Peptidase_M20)
PF07687
(M20_dimer)
4 ALA A 394
GLY A 127
CYH A 125
HIS A  86
6R7  A 502 (-4.2A)
None
MN  A 501 ( 4.9A)
MN  A 501 (-3.4A)
1.46A 2ylgA-5k8oA:
undetectable
2ylgA-5k8oA:
15.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5lb3 ATP-DEPENDENT DNA
HELICASE Q5


(Homo sapiens)
PF00270
(DEAD)
PF00271
(Helicase_C)
PF16124
(RecQ_Zn_bind)
4 ALA B 414
GLY B 430
CYH B 431
HIS B 433
None
None
ZN  B 501 (-2.4A)
None
1.43A 2ylgA-5lb3B:
undetectable
2ylgA-5lb3B:
15.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5m45 ACETONE CARBOXYLASE
BETA SUBUNIT


(Xanthobacter
autotrophicus)
PF01968
(Hydantoinase_A)
PF05378
(Hydant_A_N)
4 ALA B 237
GLY B 177
CYH B  94
LYS B  93
None
1.27A 2ylgA-5m45B:
undetectable
2ylgA-5m45B:
11.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vhj 26S PROTEASOME
REGULATORY SUBUNIT
6A


(Homo sapiens)
PF00004
(AAA)
4 ALA F 385
GLY F 393
CYH F 396
LYS F 397
None
1.32A 2ylgA-5vhjF:
undetectable
2ylgA-5vhjF:
23.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vi6 HISTONE DEACETYLASE
8


(Homo sapiens)
PF00850
(Hist_deacetyl)
4 ALA A 122
GLY A 129
CYH A 131
LYS A 132
None
1.09A 2ylgA-5vi6A:
undetectable
2ylgA-5vi6A:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vi6 HISTONE DEACETYLASE
8


(Homo sapiens)
PF00850
(Hist_deacetyl)
4 ALA A 123
GLY A 129
CYH A 131
LYS A 132
None
1.26A 2ylgA-5vi6A:
undetectable
2ylgA-5vi6A:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wp4 PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE
1


(Arabidopsis
thaliana)
no annotation 4 ALA A 413
GLY A 484
CYH A 387
LYS A 482
None
1.20A 2ylgA-5wp4A:
undetectable
2ylgA-5wp4A:
13.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wp5 PHOSPHOMETHYLETHANOL
AMINE
N-METHYLTRANSFERASE
2


(Arabidopsis
thaliana)
no annotation 4 ALA A 413
GLY A 484
CYH A 387
LYS A 482
None
1.14A 2ylgA-5wp5A:
undetectable
2ylgA-5wp5A:
12.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5x45 PROTEASE 2A

(Rhinovirus C)
no annotation 4 ALA A 121
GLY A 106
CYH A  16
HIS A  18
None
1.27A 2ylgA-5x45A:
undetectable
2ylgA-5x45A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5y51 -

(-)
no annotation 4 ALA A  21
GLY A  16
CYH A  18
HIS A 169
None
1.48A 2ylgA-5y51A:
undetectable
2ylgA-5y51A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5y7w NUCLEAR RECEPTOR
COACTIVATOR 1


(Mus musculus)
no annotation 4 ALA A 310
GLY A 360
CYH A 344
LYS A 343
None
1.31A 2ylgA-5y7wA:
undetectable
2ylgA-5y7wA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6c9e CYSTEINE DESULFURASE

(Legionella
pneumophila)
no annotation 4 ALA A 115
GLY A 146
CYH A 142
LYS A 143
None
1.47A 2ylgA-6c9eA:
undetectable
2ylgA-6c9eA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6elq CARBON MONOXIDE
DEHYDROGENASE


(Carboxydothermus
hydrogenoformans)
no annotation 4 ALA X 563
GLY X 475
CYH X 525
HIS X  92
None
BF8  X 702 ( 4.1A)
BF8  X 702 (-2.0A)
None
1.43A 2ylgA-6elqX:
undetectable
2ylgA-6elqX:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6gng -

(-)
no annotation 4 ALA A 369
GLY A 498
CYH A 499
LYS A 500
None
1.43A 2ylgA-6gngA:
undetectable
2ylgA-6gngA:
undetectable