SIMILAR PATTERNS OF AMINO ACIDS FOR 2VDB_A_NPSA1591

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ct9 ASPARAGINE
SYNTHETASE B


(Escherichia
coli)
PF00733
(Asn_synthase)
PF13537
(GATase_7)
4 ILE A 102
PHE A 121
LEU A 117
GLY A 136
None
0.87A 2vdbA-1ct9A:
0.0
2vdbA-1ct9A:
23.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1isc IRON(III) SUPEROXIDE
DISMUTASE


(Escherichia
coli)
PF00081
(Sod_Fe_N)
PF02777
(Sod_Fe_C)
4 ILE A  18
LEU A 180
PHE A 177
TYR A 173
None
0.75A 2vdbA-1iscA:
undetectable
2vdbA-1iscA:
15.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1iy2 ATP-DEPENDENT
METALLOPROTEASE FTSH


(Thermus
thermophilus)
PF00004
(AAA)
4 ILE A 251
LEU A 175
ARG A 207
GLY A 211
None
0.93A 2vdbA-1iy2A:
0.0
2vdbA-1iy2A:
20.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1jeo HYPOTHETICAL PROTEIN
MJ1247


(Methanocaldococcus
jannaschii)
PF01380
(SIS)
4 ILE A  43
PHE A  58
LEU A  62
ARG A  36
None
0.95A 2vdbA-1jeoA:
0.0
2vdbA-1jeoA:
14.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1n7u ADSORPTION PROTEIN
P2


(Salmonella
virus PRD1)
PF09214
(Prd1-P2)
4 ILE A 407
LEU A 396
TYR A 354
GLY A 401
None
0.80A 2vdbA-1n7uA:
undetectable
2vdbA-1n7uA:
20.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1opk PROTO-ONCOGENE
TYROSINE-PROTEIN
KINASE ABL1


(Mus musculus)
PF00017
(SH2)
PF00018
(SH3_1)
PF07714
(Pkinase_Tyr)
4 ILE A 182
PHE A 168
LEU A 232
ARG A 180
None
0.90A 2vdbA-1opkA:
0.0
2vdbA-1opkA:
20.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pmi PHOSPHOMANNOSE
ISOMERASE


(Candida
albicans)
PF01238
(PMI_typeI)
4 ILE A 288
PHE A 307
LEU A 249
GLY A 262
None
0.83A 2vdbA-1pmiA:
0.0
2vdbA-1pmiA:
24.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1q5z SIPA

(Salmonella
enterica)
PF09052
(SipA)
4 ILE A 609
HIS A 612
LEU A 649
ARG A 571
None
0.98A 2vdbA-1q5zA:
0.0
2vdbA-1q5zA:
15.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rgy BETA-LACTAMASE

(Citrobacter
freundii)
PF00144
(Beta-lactamase)
4 PHE A 158
LEU A 106
ARG A  80
GLY A  74
None
0.83A 2vdbA-1rgyA:
0.0
2vdbA-1rgyA:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1sxj ACTIVATOR 1 37 KDA
SUBUNIT


(Saccharomyces
cerevisiae)
PF00004
(AAA)
PF08542
(Rep_fac_C)
4 ILE B  93
LEU B  78
ARG B  90
GLY B  85
None
0.97A 2vdbA-1sxjB:
0.0
2vdbA-1sxjB:
20.95
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1tf0 SERUM ALBUMIN

(Homo sapiens)
PF00273
(Serum_albumin)
5 HIS A 146
PHE A 149
LEU A 154
PHE A 157
GLY A 189
None
0.53A 2vdbA-1tf0A:
39.0
2vdbA-1tf0A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1tf0 SERUM ALBUMIN

(Homo sapiens)
PF00273
(Serum_albumin)
4 ILE A 142
HIS A 146
LEU A 154
PHE A 157
None
0.73A 2vdbA-1tf0A:
39.0
2vdbA-1tf0A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1tqz NECAP1

(Mus musculus)
PF07933
(DUF1681)
4 ILE A  22
LEU A  38
TYR A  31
GLY A 107
None
0.95A 2vdbA-1tqzA:
undetectable
2vdbA-1tqzA:
13.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1u0m PUTATIVE POLYKETIDE
SYNTHASE


(Streptomyces
coelicolor)
PF00195
(Chal_sti_synt_N)
PF02797
(Chal_sti_synt_C)
4 ILE A 162
LEU A 310
ARG A 147
GLY A 142
None
0.91A 2vdbA-1u0mA:
undetectable
2vdbA-1u0mA:
20.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1v32 HYPOTHETICAL PROTEIN
RAFL09-47-K03


(Arabidopsis
thaliana)
PF02201
(SWIB)
4 ILE A  77
LEU A  85
ARG A  75
GLY A  73
None
0.79A 2vdbA-1v32A:
undetectable
2vdbA-1v32A:
8.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1v8d HYPOTHETICAL PROTEIN
(TT1679)


(Thermus
thermophilus)
PF04260
(DUF436)
4 PHE A  54
LEU A 189
ARG A 183
GLY A 169
None
0.86A 2vdbA-1v8dA:
undetectable
2vdbA-1v8dA:
17.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1v9n MALATE DEHYDROGENASE

(Pyrococcus
horikoshii)
PF02615
(Ldh_2)
4 ILE A  90
PHE A 282
ARG A 103
GLY A 101
None
0.82A 2vdbA-1v9nA:
undetectable
2vdbA-1v9nA:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1y9j SEC1 FAMILY DOMAIN
CONTAINING PROTEIN 1


(Rattus
norvegicus)
PF00995
(Sec1)
4 LEU A  41
PHE A  86
ARG A  45
GLY A  47
None
0.94A 2vdbA-1y9jA:
undetectable
2vdbA-1y9jA:
13.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bzg THIOPURINE
S-METHYLTRANSFERASE


(Homo sapiens)
PF05724
(TPMT)
4 ILE A 149
PHE A 178
LEU A 174
PHE A 171
None
0.77A 2vdbA-2bzgA:
undetectable
2vdbA-2bzgA:
17.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2cdq ASPARTOKINASE

(Arabidopsis
thaliana)
PF00696
(AA_kinase)
4 ILE A  97
HIS A 101
LEU A 122
GLY A 147
None
0.89A 2vdbA-2cdqA:
undetectable
2vdbA-2cdqA:
21.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hd7 TWINFILIN-1

(Mus musculus)
PF00241
(Cofilin_ADF)
4 ILE A 256
HIS A 237
LEU A 225
GLY A 300
None
0.95A 2vdbA-2hd7A:
undetectable
2vdbA-2hd7A:
13.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ijr HYPOTHETICAL PROTEIN
API92


(Yersinia
pseudotuberculosis)
PF06924
(DUF1281)
4 ILE A 111
LEU A  43
PHE A  81
GLY A  47
None
0.98A 2vdbA-2ijrA:
undetectable
2vdbA-2ijrA:
18.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2jtc STREPTOPAIN

(Streptococcus
pyogenes)
PF01640
(Peptidase_C10)
4 ILE A  55
HIS A  59
LEU A 147
GLY A 250
None
0.87A 2vdbA-2jtcA:
undetectable
2vdbA-2jtcA:
18.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2p9w MAL S 1 ALLERGENIC
PROTEIN


(Malassezia
sympodialis)
no annotation 4 PHE A 282
LEU A 230
PHE A 224
GLY A 273
None
0.80A 2vdbA-2p9wA:
undetectable
2vdbA-2p9wA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2pcn S-ADENOSYLMETHIONINE
:2-DEMETHYLMENAQUINO
NE METHYLTRANSFERASE


(Geobacillus
kaustophilus)
PF03737
(RraA-like)
4 ILE A 112
PHE A  23
LEU A  21
PHE A 133
None
0.90A 2vdbA-2pcnA:
undetectable
2vdbA-2pcnA:
12.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2v26 MYOSIN VI

(Sus scrofa)
PF00063
(Myosin_head)
4 ILE A 247
PHE A 432
TYR A 428
GLY A 193
None
0.95A 2vdbA-2v26A:
undetectable
2vdbA-2v26A:
22.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2w4g MYOSIN HEAVY CHAIN,
SKELETAL MUSCLE,
ADULT


(Gallus gallus)
PF00063
(Myosin_head)
PF02736
(Myosin_N)
4 ILE M 287
PHE M 438
TYR M 434
GLY M 233
None
0.97A 2vdbA-2w4gM:
undetectable
2vdbA-2w4gM:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2w7w SUPEROXIDE DISMUTASE
[FE]


(Aliivibrio
salmonicida)
PF00081
(Sod_Fe_N)
PF02777
(Sod_Fe_C)
4 ILE A  19
LEU A 182
PHE A 179
TYR A 175
None
0.81A 2vdbA-2w7wA:
undetectable
2vdbA-2w7wA:
14.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2x36 LON PROTEASE
HOMOLOG,
MITOCHONDRIAL


(Homo sapiens)
PF05362
(Lon_C)
4 ILE A 840
LEU A 864
TYR A 834
GLY A 763
None
0.84A 2vdbA-2x36A:
undetectable
2vdbA-2x36A:
16.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xqr INVERTASE INHIBITOR

(Nicotiana
tabacum)
PF04043
(PMEI)
4 ILE B  43
LEU B  85
ARG B 140
GLY B 103
None
0.82A 2vdbA-2xqrB:
undetectable
2vdbA-2xqrB:
14.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2y9e MYOSIN-2

(Dictyostelium
discoideum)
PF00063
(Myosin_head)
PF02736
(Myosin_N)
4 ILE X 280
PHE X 430
ARG X 267
GLY X 226
None
0.76A 2vdbA-2y9eX:
undetectable
2vdbA-2y9eX:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2zj9 AMPC

(Escherichia
coli)
PF00144
(Beta-lactamase)
4 PHE A 158
LEU A 106
ARG A  80
GLY A  74
None
0.85A 2vdbA-2zj9A:
undetectable
2vdbA-2zj9A:
22.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3d6x (3R)-HYDROXYMYRISTOY
L-[ACYL-CARRIER-PROT
EIN] DEHYDRATASE


(Campylobacter
jejuni)
PF07977
(FabA)
4 PHE A  89
LEU A 139
PHE A 123
GLY A  68
None
0.79A 2vdbA-3d6xA:
undetectable
2vdbA-3d6xA:
15.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3eq2 PROBABLE
TWO-COMPONENT
RESPONSE REGULATOR


(Pseudomonas
aeruginosa)
PF00072
(Response_reg)
PF07228
(SpoIIE)
4 ILE A 384
LEU A 339
ARG A 182
GLY A 373
None
0.85A 2vdbA-3eq2A:
undetectable
2vdbA-3eq2A:
21.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3fgq NEUROSERPIN

(Homo sapiens)
PF00079
(Serpin)
4 PHE A 132
LEU A  90
PHE A  87
GLY A  58
None
0.91A 2vdbA-3fgqA:
undetectable
2vdbA-3fgqA:
20.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gyg NTD BIOSYNTHESIS
OPERON PUTATIVE
HYDROLASE NTDB


(Bacillus
subtilis)
PF05116
(S6PP)
4 ILE A  61
HIS A  86
PHE A  87
PHE A  23
None
0.93A 2vdbA-3gygA:
undetectable
2vdbA-3gygA:
19.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3i5c FUSION OF GENERAL
CONTROL PROTEIN GCN4
AND WSPR RESPONSE
REGULATOR PROTEIN


(Pseudomonas
aeruginosa;
Saccharomyces
cerevisiae)
PF00990
(GGDEF)
4 ILE A 316
PHE A 312
LEU A 189
TYR A 250
None
0.95A 2vdbA-3i5cA:
undetectable
2vdbA-3i5cA:
14.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ig3 PLXNA3 PROTEIN

(Mus musculus)
PF08337
(Plexin_cytopl)
4 PHE A1343
LEU A1337
PHE A1334
ARG A1839
None
0.71A 2vdbA-3ig3A:
undetectable
2vdbA-3ig3A:
24.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ipr PTS SYSTEM, IIA
COMPONENT


(Enterococcus
faecalis)
PF03610
(EIIA-man)
4 ILE A 122
HIS A 108
LEU A  62
PHE A  92
None
0.91A 2vdbA-3iprA:
undetectable
2vdbA-3iprA:
13.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jqw COLH PROTEIN

(Hathewaya
histolytica)
PF04151
(PPC)
4 ILE A 915
LEU A 961
ARG A 972
GLY A 890
None
0.89A 2vdbA-3jqwA:
undetectable
2vdbA-3jqwA:
12.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k8v FLAGELLIN HOMOLOG

(Sphingomonas
sp. A1)
PF00669
(Flagellin_N)
PF00700
(Flagellin_C)
PF07196
(Flagellin_IN)
4 ILE A 225
LEU A 247
ARG A 217
GLY A 266
None
0.87A 2vdbA-3k8vA:
undetectable
2vdbA-3k8vA:
20.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kds CELL DIVISION
PROTEIN FTSH


(Thermotoga
maritima)
PF00004
(AAA)
PF01434
(Peptidase_M41)
4 ILE E 256
LEU E 180
ARG E 212
GLY E 216
None
0.69A 2vdbA-3kdsE:
undetectable
2vdbA-3kdsE:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kh5 PROTEIN MJ1225

(Methanocaldococcus
jannaschii)
PF00571
(CBS)
4 ILE A 220
HIS A 211
ARG A 218
GLY A 215
None
0.96A 2vdbA-3kh5A:
undetectable
2vdbA-3kh5A:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ljf IRON SUPEROXIDE
DISMUTASE


(Pseudoalteromonas
haloplanktis)
PF00081
(Sod_Fe_N)
PF02777
(Sod_Fe_C)
4 ILE A  18
LEU A 181
PHE A 178
TYR A 174
None
0.81A 2vdbA-3ljfA:
undetectable
2vdbA-3ljfA:
14.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ll1 GRIFFITHSIN

(Griffithsia sp.
Q66D336)
PF01419
(Jacalin)
4 ILE A  69
LEU A 114
PHE A   7
ARG A  64
None
0.89A 2vdbA-3ll1A:
undetectable
2vdbA-3ll1A:
11.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3n70 TRANSPORT ACTIVATOR

(Escherichia
coli)
PF14532
(Sigma54_activ_2)
4 ILE A 281
LEU A 162
TYR A 155
ARG A 179
None
None
None
SO4  A   1 (-4.4A)
0.95A 2vdbA-3n70A:
undetectable
2vdbA-3n70A:
13.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nek NITROGEN
REPRESSOR-LIKE
PROTEIN MJ0159


(Methanocaldococcus
jannaschii)
PF01995
(DUF128)
4 ILE A 391
PHE A 380
LEU A 366
PHE A 363
None
0.91A 2vdbA-3nekA:
undetectable
2vdbA-3nekA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3nix FLAVOPROTEIN/DEHYDRO
GENASE


(Cytophaga
hutchinsonii)
PF01494
(FAD_binding_3)
4 ILE A 345
LEU A 300
PHE A 299
GLY A 307
None
None
FAD  A 501 (-4.1A)
FAD  A 501 (-3.0A)
0.83A 2vdbA-3nixA:
undetectable
2vdbA-3nixA:
19.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3q0c HISTONE-LYSINE
N-METHYLTRANSFERASE,
H3 LYSINE-9 SPECIFIC
SUVH5


(Arabidopsis
thaliana)
no annotation 4 ILE X 410
PHE X 511
LEU X 456
GLY X 430
None
0.95A 2vdbA-3q0cX:
undetectable
2vdbA-3q0cX:
14.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3tr5 PEPTIDE CHAIN
RELEASE FACTOR 3


(Coxiella
burnetii)
PF00009
(GTP_EFTU)
PF16658
(RF3_C)
4 LEU A  30
PHE A  33
TYR A  76
GLY A 262
None
0.79A 2vdbA-3tr5A:
undetectable
2vdbA-3tr5A:
20.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3uk1 TRANSKETOLASE

(Burkholderia
thailandensis)
PF00456
(Transketolase_N)
PF02779
(Transket_pyr)
PF02780
(Transketolase_C)
4 ILE A 430
HIS A 429
LEU A 395
GLY A 456
None
0.80A 2vdbA-3uk1A:
undetectable
2vdbA-3uk1A:
19.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vr1 PEPTIDE CHAIN
RELEASE FACTOR 3


(Desulfovibrio
vulgaris)
PF00009
(GTP_EFTU)
PF03144
(GTP_EFTU_D2)
PF16658
(RF3_C)
4 LEU A 426
PHE A 427
ARG A 398
GLY A 438
None
0.96A 2vdbA-3vr1A:
undetectable
2vdbA-3vr1A:
20.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vzg ZYMOGEN GRANULE
MEMBRANE PROTEIN 16


(Homo sapiens)
PF01419
(Jacalin)
4 ILE A  61
LEU A 108
PHE A 120
ARG A  55
None
0.98A 2vdbA-3vzgA:
undetectable
2vdbA-3vzgA:
11.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wgo MESO-DIAMINOPIMELATE
DEHYDROGENASE


(Clostridium
tetani)
PF16654
(DAPDH_C)
4 ILE A  83
PHE A  35
LEU A  56
GLY A   8
None
0.97A 2vdbA-3wgoA:
undetectable
2vdbA-3wgoA:
19.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wvr PGM1

(Streptomyces
cirratus)
no annotation 4 LEU A 315
PHE A 256
ARG A 301
GLY A 299
None
0.88A 2vdbA-3wvrA:
undetectable
2vdbA-3wvrA:
21.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3zef PRE-MRNA-SPLICING
FACTOR 8


(Saccharomyces
cerevisiae)
PF08084
(PROCT)
PF10596
(U6-snRNA_bdg)
PF10597
(U5_2-snRNA_bdg)
PF10598
(RRM_4)
PF12134
(PRP8_domainIV)
4 ILE B1113
LEU B1066
ARG B1105
GLY B1102
None
0.97A 2vdbA-3zefB:
undetectable
2vdbA-3zefB:
16.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4anj UNCONVENTIONAL
MYOSIN-VI, GREEN
FLUORESCENT PROTEIN


(Aequorea
victoria;
Sus scrofa)
PF00063
(Myosin_head)
PF01353
(GFP)
4 ILE A 247
PHE A 432
TYR A 428
GLY A 193
None
0.93A 2vdbA-4anjA:
undetectable
2vdbA-4anjA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4c0d CCR4-NOT
TRANSCRIPTION
COMPLEX SUBUNIT 1


(Homo sapiens)
PF04054
(Not1)
4 ILE A2242
PHE A2251
PHE A2284
GLY A2223
None
0.70A 2vdbA-4c0dA:
0.0
2vdbA-4c0dA:
21.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4dws CHI2

(Yersinia
entomophaga)
PF00704
(Glyco_hydro_18)
4 ILE A 435
PHE A 548
LEU A 491
GLY A 553
None
None
None
MLY  A 552 ( 2.4A)
0.96A 2vdbA-4dwsA:
undetectable
2vdbA-4dwsA:
20.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4f4o HAPTOGLOBIN

(Sus scrofa)
PF00089
(Trypsin)
4 ILE C 336
LEU C 139
ARG C 332
GLY C 314
None
0.85A 2vdbA-4f4oC:
undetectable
2vdbA-4f4oC:
20.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kys THIAMINE
PYRIDINYLASE I


(Clostridium
botulinum)
PF01547
(SBP_bac_1)
4 LEU A 147
PHE A 148
ARG A 254
GLY A 268
None
0.91A 2vdbA-4kysA:
undetectable
2vdbA-4kysA:
20.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4l5o PUTATIVE GLUTATHIONE
TRANSFERASE


(Clonorchis
sinensis)
PF02798
(GST_N)
PF14497
(GST_C_3)
4 ILE A  75
HIS A  79
LEU A  20
GLY A  25
None
ZN  A 303 (-3.0A)
None
None
0.90A 2vdbA-4l5oA:
undetectable
2vdbA-4l5oA:
14.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lxl LYSINE-SPECIFIC
DEMETHYLASE 4B


(Homo sapiens)
PF02373
(JmjC)
PF02375
(JmjN)
4 ILE A 151
PHE A  28
LEU A 154
PHE A 292
None
0.88A 2vdbA-4lxlA:
undetectable
2vdbA-4lxlA:
18.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4lyp EXO-BETA-1,4-MANNOSI
DASE


(Rhizomucor
miehei)
no annotation 4 HIS A 172
PHE A 169
PHE A 123
GLY A 114
None
0.97A 2vdbA-4lypA:
undetectable
2vdbA-4lypA:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4oal CYTOKININ
DEHYDROGENASE 4


(Zea mays)
PF01565
(FAD_binding_4)
PF09265
(Cytokin-bind)
4 PHE A 233
LEU A 512
PHE A 509
GLY A 229
None
0.91A 2vdbA-4oalA:
undetectable
2vdbA-4oalA:
20.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4oqr CYP105AS1

(Amycolatopsis
orientalis)
PF00067
(p450)
4 ILE A 118
PHE A 113
ARG A 355
GLY A 350
None
None
None
HEM  A 501 (-3.6A)
0.85A 2vdbA-4oqrA:
undetectable
2vdbA-4oqrA:
21.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4pd3 NONMUSCLE MYOSIN
HEAVY CHAIN B,
ALPHA-ACTININ A
CHIMERA PROTEIN


(Dictyostelium
discoideum;
Homo sapiens)
PF00063
(Myosin_head)
PF00435
(Spectrin)
PF02736
(Myosin_N)
4 ILE A 283
PHE A 433
TYR A 429
GLY A 229
None
0.95A 2vdbA-4pd3A:
undetectable
2vdbA-4pd3A:
20.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4pd3 NONMUSCLE MYOSIN
HEAVY CHAIN B,
ALPHA-ACTININ A
CHIMERA PROTEIN


(Dictyostelium
discoideum;
Homo sapiens)
PF00063
(Myosin_head)
PF00435
(Spectrin)
PF02736
(Myosin_N)
4 LEU A 436
PHE A 433
TYR A 429
GLY A 229
None
0.92A 2vdbA-4pd3A:
undetectable
2vdbA-4pd3A:
20.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qgr DEGT/DNRJ/ERYC1/STRS
AMINOTRANSFERASE


(Brucella
abortus)
PF01041
(DegT_DnrJ_EryC1)
4 ILE A 366
HIS A 370
LEU A 270
ARG A 297
None
0.98A 2vdbA-4qgrA:
undetectable
2vdbA-4qgrA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qo6 ADENYLATE
CYCLASE-LIKE PROTEIN


(Chlamydia
trachomatis)
PF04972
(BON)
4 ILE A 657
PHE A 678
LEU A 684
PHE A 655
None
0.90A 2vdbA-4qo6A:
undetectable
2vdbA-4qo6A:
15.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4r4z PNGF-II

(Elizabethkingia
meningoseptica)
PF09112
(N-glycanase_N)
PF09113
(N-glycanase_C)
4 ILE A 196
HIS A 358
PHE A 349
GLY A 351
None
0.98A 2vdbA-4r4zA:
undetectable
2vdbA-4r4zA:
19.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rk1 RIBOSE
TRANSCRIPTIONAL
REGULATOR


(Enterococcus
faecium)
PF13377
(Peripla_BP_3)
4 ILE A 203
PHE A 248
LEU A 250
GLY A 172
None
0.83A 2vdbA-4rk1A:
undetectable
2vdbA-4rk1A:
19.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4s28 PHOSPHOMETHYLPYRIMID
INE SYNTHASE,
CHLOROPLASTIC


(Arabidopsis
thaliana)
PF01964
(ThiC_Rad_SAM)
4 ILE A 368
LEU A 379
PHE A 319
ARG A 305
None
None
None
BU1  A 706 (-4.2A)
0.96A 2vdbA-4s28A:
undetectable
2vdbA-4s28A:
21.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4wcx BIOTIN AND THIAMIN
SYNTHESIS ASSOCIATED


(Thermoanaerobacter
italicus)
PF04055
(Radical_SAM)
PF06968
(BATS)
4 ILE A  80
PHE A 417
LEU A 367
GLY A 126
None
0.94A 2vdbA-4wcxA:
undetectable
2vdbA-4wcxA:
21.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4wk0 INTEGRIN BETA-1

(Homo sapiens)
PF00362
(Integrin_beta)
PF17205
(PSI_integrin)
4 ILE B 425
LEU B 113
PHE B 406
TYR B 377
None
0.89A 2vdbA-4wk0B:
undetectable
2vdbA-4wk0B:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4xz7 PUTATIVE
UNCHARACTERIZED
PROTEIN


(Streptococcus
suis)
PF01841
(Transglut_core)
4 ILE A 120
LEU A  94
PHE A  97
GLY A  86
None
0.79A 2vdbA-4xz7A:
undetectable
2vdbA-4xz7A:
22.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zi8 PROTEIN PCDHGC3

(Mus musculus)
PF00028
(Cadherin)
PF08266
(Cadherin_2)
4 ILE A 200
PHE A 150
LEU A 166
PHE A 124
None
0.96A 2vdbA-4zi8A:
undetectable
2vdbA-4zi8A:
19.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zpl PROTEIN PCDHB1

(Mus musculus)
PF00028
(Cadherin)
PF08266
(Cadherin_2)
4 ILE A 200
PHE A 150
LEU A 166
PHE A 124
None
0.85A 2vdbA-4zplA:
undetectable
2vdbA-4zplA:
21.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5a22 VESICULAR STOMATITIS
VIRUS L POLYMERASE


(Vesicular
stomatitis
virus)
PF00946
(Mononeg_RNA_pol)
PF14314
(Methyltrans_Mon)
PF14318
(Mononeg_mRNAcap)
4 ILE A1661
LEU A1758
TYR A1835
GLY A1790
None
0.93A 2vdbA-5a22A:
undetectable
2vdbA-5a22A:
13.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5anb 60S RIBOSOMAL
PROTEIN L10


(Dictyostelium
discoideum)
PF00252
(Ribosomal_L16)
4 PHE F 159
PHE F 136
ARG F 154
GLY F  68
None
None
A  N3171 ( 3.0A)
None
0.93A 2vdbA-5anbF:
undetectable
2vdbA-5anbF:
15.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5dmd FLAGELLAR ASSEMBLY
FACTOR FLIW


(Geobacillus
thermodenitrificans)
PF02623
(FliW)
4 ILE A 112
PHE A  34
LEU A  47
PHE A  57
None
0.94A 2vdbA-5dmdA:
undetectable
2vdbA-5dmdA:
12.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fu7 CCR4-NOT
TRANSCRIPTION
COMPLEX SUBUNIT 1


(Homo sapiens)
PF04054
(Not1)
4 ILE A2242
PHE A2251
PHE A2284
GLY A2223
None
0.67A 2vdbA-5fu7A:
undetectable
2vdbA-5fu7A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5hyo PEDV 3CLPRO

(Porcine
epidemic
diarrhea virus)
PF05409
(Peptidase_C30)
4 ILE A  37
LEU A 161
TYR A 102
GLY A 178
None
None
IPA  A 405 (-4.6A)
None
0.98A 2vdbA-5hyoA:
undetectable
2vdbA-5hyoA:
18.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5j4r WELO5

(Hapalosiphon
welwitschii)
no annotation 4 ILE A  32
LEU A 251
PHE A 252
GLY A 254
None
None
AKG  A 301 (-4.8A)
None
0.91A 2vdbA-5j4rA:
undetectable
2vdbA-5j4rA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5kvu ISOCITRATE
DEHYDROGENASE


(Mycobacterium
tuberculosis)
PF03971
(IDH)
4 ILE A 359
PHE A 401
LEU A 560
PHE A 557
None
0.96A 2vdbA-5kvuA:
undetectable
2vdbA-5kvuA:
22.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ldr BETA-D-GALACTOSIDASE

(Paracoccus sp.
32d)
PF00703
(Glyco_hydro_2)
PF02836
(Glyco_hydro_2_C)
PF02837
(Glyco_hydro_2_N)
4 ILE B 676
HIS B 718
PHE B 721
LEU B 638
None
0.81A 2vdbA-5ldrB:
undetectable
2vdbA-5ldrB:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mdx PHOTOSYSTEM II CP43
REACTION CENTER
PROTEIN
PHOTOSYSTEM II
PROTEIN D1


(Arabidopsis
thaliana)
PF00124
(Photo_RC)
PF00421
(PSII)
4 ILE A 163
PHE A 168
LEU A  91
PHE C 218
None
0.68A 2vdbA-5mdxA:
undetectable
2vdbA-5mdxA:
17.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ng6 CRISPR-ASSOCIATED
ENDONUCLEASE CPF1


(Francisella
tularensis)
no annotation 4 PHE A 378
LEU A 377
PHE A 565
TYR A 562
None
0.85A 2vdbA-5ng6A:
undetectable
2vdbA-5ng6A:
18.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ofq CYTOCHROME P450

(Bacillus
megaterium)
PF00067
(p450)
4 ILE A 133
PHE A 374
LEU A 368
ARG A 255
None
0.85A 2vdbA-5ofqA:
1.0
2vdbA-5ofqA:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5tqm CINNAMOYL-COA
REDUCTASE


(Sorghum bicolor)
PF01370
(Epimerase)
4 ILE A 150
LEU A 271
PHE A 312
TYR A 310
DTT  A 403 (-4.5A)
None
None
None
0.83A 2vdbA-5tqmA:
undetectable
2vdbA-5tqmA:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5uve SUBSTRATE-BINDING
REGION OF ABC-TYPE
GLYCINE BETAINE
TRANSPORT SYSTEM


(Brucella
abortus)
PF04069
(OpuAC)
4 PHE A 167
LEU A 174
PHE A 177
GLY A 130
None
0.94A 2vdbA-5uveA:
undetectable
2vdbA-5uveA:
19.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wbl REGULATORY-ASSOCIATE
D PROTEIN OF TOR 1


(Arabidopsis
thaliana)
no annotation 4 ILE A1285
LEU A1315
TYR A1336
GLY A1327
None
0.87A 2vdbA-5wblA:
undetectable
2vdbA-5wblA:
7.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xnc -

(-)
no annotation 4 ILE A 323
LEU A 272
PHE A 276
GLY A 238
None
0.74A 2vdbA-5xncA:
undetectable
2vdbA-5xncA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xvu CASEIN KINASE 2,
ALPHA SUBUNIT


(Plasmodium
falciparum)
PF00069
(Pkinase)
4 ILE A 208
LEU A 246
TYR A 261
GLY A 203
None
0.94A 2vdbA-5xvuA:
undetectable
2vdbA-5xvuA:
17.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5y4j XYLOSE ISOMERASE

(Streptomyces
rubiginosus)
PF01261
(AP_endonuc_2)
4 ILE A 244
HIS A 243
LEU A 241
GLY A 282
None
0.70A 2vdbA-5y4jA:
undetectable
2vdbA-5y4jA:
21.96
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5yxe SERUM ALBUMIN

(Felis catus)
no annotation 4 HIS A 146
PHE A 149
LEU A 154
ARG A 186
None
0.53A 2vdbA-5yxeA:
37.5
2vdbA-5yxeA:
30.54
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5yxe SERUM ALBUMIN

(Felis catus)
no annotation 4 ILE A 142
HIS A 146
LEU A 154
ARG A 186
None
0.65A 2vdbA-5yxeA:
37.5
2vdbA-5yxeA:
30.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6bnp UNCONVENTIONAL
MYOSIN-VI


(Sus scrofa)
no annotation 4 ILE I 247
PHE I 432
TYR I 428
GLY I 193
None
0.90A 2vdbA-6bnpI:
undetectable
2vdbA-6bnpI:
12.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ccf CALCIUM/CALMODULIN-D
EPENDENT PROTEIN
KINASE KINASE 1


(Homo sapiens)
no annotation 4 ILE A 403
LEU A 256
ARG A 397
GLY A 340
None
0.73A 2vdbA-6ccfA:
undetectable
2vdbA-6ccfA:
9.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6f72 MTVAO615

(Thermothelomyces
thermophila)
no annotation 4 ILE A 239
LEU A 399
TYR A 391
GLY A 220
None
None
None
FAD  A 601 ( 4.0A)
0.90A 2vdbA-6f72A:
undetectable
2vdbA-6f72A:
9.87