SIMILAR PATTERNS OF AMINO ACIDS FOR 2OQE_E_CUE801

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1a2v METHYLAMINE OXIDASE

(Ogataea angusta) 		PF01179
(Cu_amine_oxid)
PF02727
(Cu_amine_oxidN2)
PF02728
(Cu_amine_oxidN3) 		4 LEU A 425
HIS A 456
HIS A 458
HIS A 624
 None
CU  A   1 (-3.3A)
CU  A   1 (-3.2A)
CU  A   1 (-3.1A)
 0.13A 2oqeE-1a2vA:
66.5		 2oqeE-1a2vA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1aso ASCORBATE OXIDASE

(Cucurbita pepo) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 513
HIS A 448
HIS A 506
HIS A 508
 None
CU  A 557 ( 3.2A)
CU  A 555 (-3.1A)
CU  A 556 (-3.3A)
 1.22A 2oqeE-1asoA:
0.0		 2oqeE-1asoA:
21.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1hfu LACCASE 1

(Coprinopsis
cinerea) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 458
HIS A 399
HIS A 451
HIS A 453
 None
CU  A 702 ( 3.7A)
CU  A 702 (-3.2A)
CU  A 703 (-3.3A)
 1.00A 2oqeE-1hfuA:
0.0		 2oqeE-1hfuA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1j8m SIGNAL RECOGNITION
54 KDA PROTEIN

(Acidianus
ambivalens) 		PF00448
(SRP54)
PF02881
(SRP54_N) 		4 LEU F  15
HIS F 294
HIS F 295
HIS F 296
 None
 1.23A 2oqeE-1j8mF:
0.0		 2oqeE-1j8mF:
19.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ksi COPPER AMINE OXIDASE

(Pisum sativum) 		PF01179
(Cu_amine_oxid)
PF02727
(Cu_amine_oxidN2)
PF02728
(Cu_amine_oxidN3) 		4 LEU A 407
HIS A 442
HIS A 444
HIS A 603
 None
CU  A 650 ( 3.3A)
CU  A 650 ( 3.3A)
CU  A 650 ( 3.2A)
 0.15A 2oqeE-1ksiA:
52.6		 2oqeE-1ksiA:
27.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2hzh LACCASE

(Trametes
ochracea) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 459
HIS A 398
HIS A 452
HIS A 454
 None
CU  A 604 (-3.1A)
CU  A 602 (-3.1A)
CU  A 603 (-3.3A)
 1.28A 2oqeE-2hzhA:
0.0		 2oqeE-2hzhA:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2oba PROBABLE 6-PYRUVOYL
TETRAHYDROBIOPTERIN
SYNTHASE

(Pseudomonas
aeruginosa) 		PF01242
(PTPS) 		4 LEU A  15
HIS A  30
HIS A  13
HIS A  28
 None
ZN  A 200 (-3.4A)
ZN  A 200 (-3.6A)
ZN  A 200 (-3.6A)
 1.32A 2oqeE-2obaA:
0.0		 2oqeE-2obaA:
13.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2qt6 LACCASE

(Lentinus
tigrinus) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 458
HIS A 397
HIS A 451
HIS A 453
 GOL  A3611 (-4.7A)
CU  A 500 (-3.1A)
CU  A 501 (-3.2A)
CU  A 502 (-3.3A)
 1.26A 2oqeE-2qt6A:
0.0		 2oqeE-2qt6A:
23.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xyb LACCASE

(Trametes
cinnabarina) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 457
HIS A 398
HIS A 450
HIS A 452
 GOL  A 610 (-4.7A)
CU  A 504 (-3.1A)
CU  A 502 ( 3.3A)
CU  A 503 ( 3.3A)
 1.23A 2oqeE-2xybA:
0.0		 2oqeE-2xybA:
22.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dka DINB-LIKE PROTEIN

(Bacillus
subtilis) 		PF05163
(DinB) 		4 LEU A  44
HIS A 127
HIS A 131
HIS A  47
 None
 1.33A 2oqeE-3dkaA:
undetectable		 2oqeE-3dkaA:
12.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dkh LACCASE-1

(Melanocarpus
albomyces) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 500
HIS A 138
HIS A 140
HIS A  93
 CU  A 602 ( 4.9A)
CU  A 603 ( 3.3A)
CU  A 602 ( 3.3A)
CU  A 604 (-3.1A)
 1.10A 2oqeE-3dkhA:
undetectable		 2oqeE-3dkhA:
22.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dy5 ALLENE OXIDE
SYNTHASE-LIPOXYGENAS
E PROTEIN

(Plexaura
homomalla) 		PF00305
(Lipoxygenase)
PF01477
(PLAT) 		4 LEU A1000
HIS A 762
HIS A 757
HIS A 943
 None
FE2  A1099 (-3.4A)
FE2  A1099 (-3.1A)
FE2  A1099 (-3.1A)
 1.33A 2oqeE-3dy5A:
undetectable		 2oqeE-3dy5A:
18.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gor PUTATIVE
METAL-DEPENDENT
HYDROLASE

(Geobacillus
stearothermophilus) 		PF05163
(DinB) 		4 LEU A  44
HIS A 127
HIS A 131
HIS A  47
 None
NI  A 200 (-3.3A)
NI  A 200 (-3.4A)
NI  A 200 (-3.5A)
 1.35A 2oqeE-3gorA:
undetectable		 2oqeE-3gorA:
12.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3i5g MYOSIN HEAVY CHAIN
ISOFORM A

(Doryteuthis
pealeii) 		PF00063
(Myosin_head)
PF00612
(IQ)
PF02736
(Myosin_N) 		4 LEU A 118
HIS A 666
HIS A 494
HIS A 668
 None
 1.18A 2oqeE-3i5gA:
undetectable		 2oqeE-3i5gA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kw7 LACCASE B

(Trametes sp.
AH28-2) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 462
HIS A 403
HIS A 455
HIS A 457
 None
CU  A 602 (-3.0A)
CU  A 603 (-3.1A)
CU  A 604 (-3.1A)
 1.26A 2oqeE-3kw7A:
undetectable		 2oqeE-3kw7A:
22.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lq0 PROASTACIN

(Astacus astacus) 		PF01400
(Astacin) 		4 LEU A  11
HIS A  96
HIS A  92
HIS A 102
 None
ZN  A 999 (-3.3A)
ZN  A 999 (-3.3A)
ZN  A 999 (-3.3A)
 1.26A 2oqeE-3lq0A:
undetectable		 2oqeE-3lq0A:
15.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3pps LACCASE

(Thielavia
arenaria) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 501
HIS A 139
HIS A 141
HIS A  94
 CU  A 602 ( 4.9A)
CU  A 603 ( 3.1A)
CU  A 602 ( 3.3A)
CU  A 604 ( 3.1A)
 1.04A 2oqeE-3ppsA:
undetectable		 2oqeE-3ppsA:
23.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vf1 11R-LIPOXYGENASE

(Gersemia
fruticosa) 		PF00305
(Lipoxygenase)
PF01477
(PLAT) 		4 LEU A 613
HIS A 378
HIS A 373
HIS A 556
 None
FE2  A 701 (-3.3A)
FE2  A 701 (-3.4A)
FE2  A 701 (-3.3A)
 1.49A 2oqeE-3vf1A:
undetectable		 2oqeE-3vf1A:
21.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3x1b LACCASE

(Lentinus) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 481
HIS A 420
HIS A 474
HIS A 476
 None
CU  A 614 (-3.1A)
CU  A 616 (-3.2A)
CU  A 615 (-3.2A)
 1.23A 2oqeE-3x1bA:
undetectable		 2oqeE-3x1bA:
21.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bed HEMOCYANIN KLH1

(Megathura
crenulata) 		PF00264
(Tyrosinase)
PF14830
(Haemocyan_bet_s) 		4 LEU A 344
HIS A 209
HIS A 183
HIS A 179
 None
None
CUO  A9001 (-3.4A)
CUO  A9001 (-3.4A)
 1.44A 2oqeE-4bedA:
undetectable		 2oqeE-4bedA:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bed HEMOCYANIN KLH1

(Megathura
crenulata) 		PF00264
(Tyrosinase)
PF14830
(Haemocyan_bet_s) 		4 LEU A 344
HIS A 210
HIS A 183
HIS A 179
 None
CUO  A9001 (-3.3A)
CUO  A9001 (-3.4A)
CUO  A9001 (-3.4A)
 1.36A 2oqeE-4bedA:
undetectable		 2oqeE-4bedA:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bed HEMOCYANIN KLH1

(Megathura
crenulata) 		PF00264
(Tyrosinase)
PF14830
(Haemocyan_bet_s) 		4 LEU A 763
HIS A 633
HIS A 606
HIS A 602
 None
CUO  A9002 (-3.3A)
CUO  A9002 (-3.3A)
CUO  A9002 (-3.4A)
 1.41A 2oqeE-4bedA:
undetectable		 2oqeE-4bedA:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bed HEMOCYANIN KLH1

(Megathura
crenulata) 		PF00264
(Tyrosinase)
PF14830
(Haemocyan_bet_s) 		4 LEU A1589
HIS A1455
HIS A1428
HIS A1424
 None
CUO  A9004 (-3.3A)
CUO  A9004 (-3.4A)
CUO  A9004 (-3.0A)
 1.45A 2oqeE-4bedA:
undetectable		 2oqeE-4bedA:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bed HEMOCYANIN KLH1

(Megathura
crenulata) 		PF00264
(Tyrosinase)
PF14830
(Haemocyan_bet_s) 		4 LEU B3109
HIS B3079
HIS B3075
HIS B3105
 None
CUO  B9008 (-3.5A)
CUO  B9008 (-2.8A)
None
 1.36A 2oqeE-4bedB:
undetectable		 2oqeE-4bedB:
17.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fvl COLLAGENASE 3
COLLAGENASE 3,
PRO-DOMAIN PEPTIDE

(Homo sapiens;
Homo sapiens) 		PF00045
(Hemopexin)
PF00413
(Peptidase_M10)
no annotation 		4 LEU C  43
HIS A 172
HIS A 187
HIS A 200
 None
ZN  A 502 (-3.0A)
ZN  A 502 (-3.3A)
ZN  A 502 (-3.1A)
 1.16A 2oqeE-4fvlC:
undetectable		 2oqeE-4fvlC:
8.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5hif RECONSTRUCTED
LACTONASE ANCESTOR,
ANC1-MPH

(synthetic
construct) 		PF00753
(Lactamase_B) 		4 LEU A 222
HIS A 114
HIS A 204
HIS A 200
 None
ZN  A 402 (-3.4A)
None
ZN  A 402 (-3.4A)
 0.88A 2oqeE-5hifA:
undetectable		 2oqeE-5hifA:
17.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5lm8 'MULTICOPPER OXIDASE

(Aspergillus
niger) 		PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3) 		4 LEU A 513
HIS A 152
HIS A 154
HIS A 108
 CU  A 602 ( 4.6A)
CU  A 601 ( 3.2A)
CU  A 602 ( 3.4A)
CU  A 603 ( 3.1A)
 1.11A 2oqeE-5lm8A:
undetectable		 2oqeE-5lm8A:
22.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5uam ULVAN LYASE-PL25

(Pseudoalteromonas
sp. PLSV) 		PF15892
(BNR_4) 		4 LEU A 111
HIS A 158
HIS A 159
HIS A 143
 None
EDO  A 509 (-2.9A)
None
EDO  A 509 ( 3.5A)
 1.32A 2oqeE-5uamA:
undetectable		 2oqeE-5uamA:
20.58