SIMILAR PATTERNS OF AMINO ACIDS FOR 2HRC_B_CHDB1603

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1eyh EPSIN

(Rattus
norvegicus) 		PF01417
(ENTH) 		4 MET A 100
ARG A 139
LEU A 140
MET A  78
 None
 1.29A 2hrcB-1eyhA:
0.0		 2hrcB-1eyhA:
15.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1hc7 PROLYL-TRNA
SYNTHETASE

(Thermus
thermophilus) 		PF00587
(tRNA-synt_2b)
PF03129
(HGTP_anticodon)
PF09180
(ProRS-C_1) 		4 ARG A 365
LEU A 366
PRO A 193
MET A 218
 None
 1.35A 2hrcB-1hc7A:
0.0		 2hrcB-1hc7A:
21.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qdm PROPHYTEPSIN

(Hordeum vulgare) 		PF00026
(Asp)
PF03489
(SapB_2)
PF05184
(SapB_1) 		4 MET A 201
LEU A 277
PRO A 232
MET A 301
 None
 1.36A 2hrcB-1qdmA:
0.0		 2hrcB-1qdmA:
19.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bpq ANTHRANILATE
PHOSPHORIBOSYLTRANSF
ERASE

(Mycobacterium
tuberculosis) 		PF00591
(Glycos_transf_3)
PF02885
(Glycos_trans_3N) 		4 MET A 230
LEU A 144
PRO A  74
MET A  69
 None
None
BEN  A1369 ( 4.2A)
None
 1.35A 2hrcB-2bpqA:
1.6		 2hrcB-2bpqA:
19.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2jan TYROSYL-TRNA
SYNTHETASE

(Mycobacterium
tuberculosis) 		PF00579
(tRNA-synt_1b) 		4 ARG A  59
LEU A   9
PRO A  32
MET A 117
 None
 1.43A 2hrcB-2janA:
0.2		 2hrcB-2janA:
21.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ovj RAC
GTPASE-ACTIVATING
PROTEIN 1

(Homo sapiens) 		PF00620
(RhoGAP) 		4 MET A 350
ARG A 437
PRO A 363
MET A 361
 None
 1.29A 2hrcB-2ovjA:
0.0		 2hrcB-2ovjA:
19.72
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3aqi FERROCHELATASE

(Homo sapiens) 		PF00762
(Ferrochelatase) 		5 MET A  99
ARG A 114
LEU A 115
PRO A 266
MET A 308
 CHD  A   2 (-4.0A)
CHD  A   2 (-3.6A)
CHD  A   2 ( 4.8A)
CHD  A   2 ( 4.5A)
None
 0.47A 2hrcB-3aqiA:
60.7		 2hrcB-3aqiA:
99.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kfl METHIONYL-TRNA
SYNTHETASE

(Leishmania
major) 		PF09334
(tRNA-synt_1g) 		4 MET A 500
ARG A 382
LEU A 413
PRO A 507
 None
None
FMT  A 822 (-4.5A)
None
 1.37A 2hrcB-3kflA:
0.0		 2hrcB-3kflA:
19.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3umm PHOSPHORIBOSYLFORMYL
GLYCINAMIDINE
SYNTHASE

(Salmonella
enterica) 		PF02769
(AIRS_C)
PF13507
(GATase_5) 		4 ARG A  15
LEU A  11
PRO A  79
MET A 136
 None
 1.03A 2hrcB-3ummA:
0.8		 2hrcB-3ummA:
13.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4k7g 3-HYDROXYPROLINE
DEHYDRATSE

(Agrobacterium
vitis) 		PF05544
(Pro_racemase) 		4 MET B  81
ARG B  56
LEU B 321
PRO B  29
 None
 1.45A 2hrcB-4k7gB:
undetectable		 2hrcB-4k7gB:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4k8l PROLINE RACEMASE

(Ochrobactrum
anthropi) 		PF05544
(Pro_racemase) 		4 MET A  81
ARG A  56
LEU A 320
PRO A  29
 None
 1.43A 2hrcB-4k8lA:
undetectable		 2hrcB-4k8lA:
19.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4px1 MALEYLACETOACETATE
ISOMERASE
(GLUTATHIONE
S-TRANSFERASE)

(Methylobacterium
extorquens) 		PF02798
(GST_N)
PF14497
(GST_C_3) 		4 MET A   3
ARG A  14
LEU A  70
PRO A  62
 None
 1.50A 2hrcB-4px1A:
undetectable		 2hrcB-4px1A:
19.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6cz4 PROTEIN-TYROSINE
KINASE 6

(Homo sapiens) 		no annotation 4 MET A 380
LEU A 437
PRO A 409
MET A 406
 None
 1.11A 2hrcB-6cz4A:
undetectable		 2hrcB-6cz4A:
undetectable