SIMILAR PATTERNS OF AMINO ACIDS FOR 2F7F_A_NIOA602_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pzt BETA-1,4-GALACTOSYLT
RANSFERASE 1

(Bos taurus) 		PF02709
(Glyco_transf_7C)
PF13733
(Glyco_transf_7N) 		4 HIS A 261
ILE A 339
LYS A 341
PRO A 144
 None
 1.32A 2f7fA-1pztA:
0.0		 2f7fA-1pztA:
22.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1s5j DNA POLYMERASE I

(Sulfolobus
solfataricus) 		PF00136
(DNA_pol_B)
PF03104
(DNA_pol_B_exo1) 		4 HIS A  86
ILE A 166
LYS A 180
ASP A  82
 None
 1.20A 2f7fA-1s5jA:
0.0		 2f7fA-1s5jA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2inp PHENOL HYDROXYLASE
COMPONENT PHL
PHENOL HYDROXYLASE
COMPONENT PHN

(Pseudomonas
stutzeri) 		PF02332
(Phenol_Hydrox)
PF04945
(YHS) 		4 HIS A 494
ILE C  13
PRO A 490
ASP A 491
 None
 1.30A 2f7fA-2inpA:
0.0		 2f7fA-2inpA:
22.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2yia RNA-DIRECTED RNA
POLYMERASE

(Infectious
pancreatic
necrosis virus) 		PF04197
(Birna_RdRp) 		4 HIS A 362
ILE A 683
PRO A 360
ASP A 665
 None
 1.45A 2f7fA-2yiaA:
0.0		 2f7fA-2yiaA:
21.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3inn PANTOTHENATE
SYNTHETASE

(Brucella
melitensis) 		PF02569
(Pantoate_ligase) 		4 HIS A   5
ILE A   4
PRO A  93
ASP A  97
 None
 1.25A 2f7fA-3innA:
1.3		 2f7fA-3innA:
21.78
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4mzy NICOTINATE
PHOSPHORIBOSYLTRANSF
ERASE

(Enterococcus
faecalis) 		PF04095
(NAPRTase) 		5 HIS A 398
ILE A 404
LYS A 406
PRO A 461
ASP A 463
 GOL  A 513 ( 4.1A)
None
GOL  A 505 (-4.3A)
GOL  A 505 ( 4.2A)
GOL  A 505 ( 2.8A)
 0.18A 2f7fA-4mzyA:
59.0		 2f7fA-4mzyA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4oz5 BACILLUS SUBTILIS
HMOB

(Bacillus
subtilis) 		PF03992
(ABM) 		4 HIS A  50
ILE A   5
PRO A  49
ASP A 109
 None
 1.32A 2f7fA-4oz5A:
0.5		 2f7fA-4oz5A:
15.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4xa8 D-ISOMER SPECIFIC
2-HYDROXYACID
DEHYDROGENASE
NAD-BINDING

(Xanthobacter
autotrophicus) 		PF02826
(2-Hacid_dh_C) 		4 HIS A 282
ILE A 286
PRO A 281
ASP A 258
 None
 1.04A 2f7fA-4xa8A:
0.7		 2f7fA-4xa8A:
23.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ixd TYROSINE-PROTEIN
KINASE JAK1

(Homo sapiens) 		no annotation 4 HIS A 420
ILE A 436
PRO A 548
ASP A 418
 None
 0.92A 2f7fA-5ixdA:
1.2		 2f7fA-5ixdA:
21.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5oc1 ARYL-ALCOHOL OXIDASE

(Pleurotus
eryngii) 		no annotation 4 HIS A 313
ILE A 500
PRO A 503
ASP A 312
 None
ANN  A 601 (-4.4A)
GOL  A 605 (-3.4A)
None
 1.17A 2f7fA-5oc1A:
0.5		 2f7fA-5oc1A:
21.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5x6o SERINE/THREONINE-PRO
TEIN KINASE MEC1

(Saccharomyces
cerevisiae) 		no annotation 4 HIS C2226
ILE C2230
LYS C2262
ASP C2224
 None
 1.47A 2f7fA-5x6oC:
0.0		 2f7fA-5x6oC:
10.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6fos PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1

(Cyanidioschyzon
merolae) 		no annotation 4 ILE A 136
LYS A 108
PRO A 381
ASP A 379
 CLA  A1106 (-3.4A)
None
None
None
 0.97A 2f7fA-6fosA:
undetectable		 2f7fA-6fosA:
10.53