SIMILAR PATTERNS OF AMINO ACIDS FOR 2EIN_B_CHDB1086

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1k5s PENICILLIN G ACYLASE
BETA SUBUNIT

(Escherichia
coli) 		PF01804
(Penicil_amidase) 		5 MET B 485
GLU B 482
THR B 481
PHE B 531
GLY B 532
 None
 1.23A 2einA-1k5sB:
0.0
2einB-1k5sB:
0.0
2einT-1k5sB:
0.0		 2einA-1k5sB:
20.53
2einB-1k5sB:
17.45
2einT-1k5sB:
12.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rie RIESKE IRON-SULFUR
PROTEIN

(Bos taurus) 		PF00355
(Rieske) 		5 GLN A 108
GLU A 105
ARG A 172
PHE A 153
GLY A 151
 None
 1.35A 2einA-1rieA:
undetectable
2einB-1rieA:
0.2
2einT-1rieA:
0.0		 2einA-1rieA:
12.32
2einB-1rieA:
18.70
2einT-1rieA:
21.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m1a PUTATIVE
DEHYDROGENASE

(Streptomyces
avermitilis) 		PF00106
(adh_short) 		5 GLU A  97
THR A  98
THR A  99
ARG A 211
PHE A 196
 None
None
None
None
NA  A 282 ( 4.9A)
 1.13A 2einA-3m1aA:
0.0
2einB-3m1aA:
0.0
2einT-3m1aA:
0.0		 2einA-3m1aA:
20.88
2einB-3m1aA:
21.40
2einT-3m1aA:
16.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qdg PUTATIVE ADHESIN

(Bacteroides
thetaiotaomicron) 		PF08842
(Mfa2) 		5 MET A 175
THR A  67
ARG A 253
PHE A 119
GLY A 153
 None
 1.36A 2einA-4qdgA:
0.0
2einB-4qdgA:
0.0
2einT-4qdgA:
0.0		 2einA-4qdgA:
20.49
2einB-4qdgA:
23.20
2einT-4qdgA:
13.97